RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ZNF853P0CG23 659 aa22.67■■□□□ 1.22
ITGB4-205ENST00000579211 HDGFL1Q5TGJ6 251 aa22.67■■□□□ 1.22
ITGB4-205ENST00000579211 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
ITGB4-205ENST00000579211 NIP7Q9Y221 180 aaKnown RBP eCLIP22.67■■□□□ 1.22
ITGB4-205ENST00000579211 BCS1LQ9Y276 419 aa22.67■■□□□ 1.22
ITGB4-205ENST00000579211 CACNA1SQ13698 1873 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 ANKRD31Q8N7Z5 1873 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 ARFGEF1Q9Y6D6 1849 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 HOXB7P09629 217 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 ST5P78524 1137 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 DUSP27Q5VZP5 1158 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 TTLL7Q6ZT98 887 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 NBPF5PQ86XG9 351 aaPredicted RBP22.66■■□□□ 1.22
ITGB4-205ENST00000579211 CNBD1Q8NA66 436 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 ZBTB3Q9H5J0 574 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 PIM2Q9P1W9 311 aa22.66■■□□□ 1.22
ITGB4-205ENST00000579211 MAP3K15Q6ZN16 1313 aa22.65■■□□□ 1.22
ITGB4-205ENST00000579211 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
ITGB4-205ENST00000579211 ERVV-1B6SEH8 477 aa22.65■■□□□ 1.22
ITGB4-205ENST00000579211 ELL2O00472 640 aaPredicted RBP22.65■■□□□ 1.22
ITGB4-205ENST00000579211 ANXA1P04083 346 aa22.65■■□□□ 1.22
ITGB4-205ENST00000579211 AIMP1Q12904 312 aaKnown RBP22.65■■□□□ 1.22
ITGB4-205ENST00000579211 HLFQ16534 295 aa22.65■■□□□ 1.22
ITGB4-205ENST00000579211 DLEC1Q9Y238 1755 aa22.65■■□□□ 1.22
ITGB4-205ENST00000579211 GOLGB1Q14789 3259 aaKnown RBP22.64■■□□□ 1.22
ITGB4-205ENST00000579211 RGL2O15211 777 aa22.64■■□□□ 1.21
ITGB4-205ENST00000579211 GTF2E1P29083 439 aaPredicted RBP22.64■■□□□ 1.21
ITGB4-205ENST00000579211 CHRNA5P30532 468 aa22.64■■□□□ 1.21
ITGB4-205ENST00000579211 NCBP3Q53F19 620 aaKnown RBP22.64■■□□□ 1.21
ITGB4-205ENST00000579211 ANKRD36CQ5JPF3 1778 aa22.63■■□□□ 1.21
ITGB4-205ENST00000579211 H0YIN7 160 aa22.63■■□□□ 1.21
ITGB4-205ENST00000579211 TPTE2Q6XPS3 522 aa22.63■■□□□ 1.21
ITGB4-205ENST00000579211 CCDC24Q8N4L8 307 aa22.63■■□□□ 1.21
ITGB4-205ENST00000579211 CHMP4AQ9BY43 222 aa22.63■■□□□ 1.21
ITGB4-205ENST00000579211 DDX21Q9NR30 783 aaKnown RBP eCLIP22.63■■□□□ 1.21
ITGB4-205ENST00000579211 PDE6BP35913 854 aa22.62■■□□□ 1.21
ITGB4-205ENST00000579211 PDIA6Q15084 440 aa22.62■■□□□ 1.21
ITGB4-205ENST00000579211 PROSER3Q2NL68 480 aa22.62■■□□□ 1.21
ITGB4-205ENST00000579211 DALRD3Q5D0E6 543 aaKnown RBP22.62■■□□□ 1.21
ITGB4-205ENST00000579211 PRR5LQ6MZQ0 368 aa22.62■■□□□ 1.21
ITGB4-205ENST00000579211 C2CD5Q86YS7 1000 aa22.62■■□□□ 1.21
ITGB4-205ENST00000579211 CHPF2Q9P2E5 772 aa22.62■■□□□ 1.21
ITGB4-205ENST00000579211 DBF4Q9UBU7 674 aaPredicted RBP22.62■■□□□ 1.21
ITGB4-205ENST00000579211 COPS6Q7L5N1 327 aa22.61■■□□□ 1.21
ITGB4-205ENST00000579211 TSR2Q969E8 191 aaKnown RBP22.61■■□□□ 1.21
ITGB4-205ENST00000579211 BRIP1Q9BX63 1249 aa22.61■■□□□ 1.21
ITGB4-205ENST00000579211 UTRNP46939 3433 aa22.6■■□□□ 1.21
ITGB4-205ENST00000579211 DIEXFQ68CQ4 756 aaKnown RBP22.6■■□□□ 1.21
ITGB4-205ENST00000579211 XAGE3Q8WTP9 111 aa22.6■■□□□ 1.21
ITGB4-205ENST00000579211 PDZRN3Q9UPQ7 1066 aa22.6■■□□□ 1.21
ITGB4-205ENST00000579211 CACNA1FO60840 1977 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 IL16Q14005 1332 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 CCER2I3L3R5 266 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 KCNA3P22001 575 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 GPTP24298 496 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 WDR63Q8IWG1 891 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 NYXQ9GZU5 481 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 HYPKQ9NX55 129 aa22.59■■□□□ 1.21
ITGB4-205ENST00000579211 GIGYF2Q6Y7W6 1299 aaKnown RBP22.58■■□□□ 1.21
ITGB4-205ENST00000579211 ARHGAP27Q6ZUM4 889 aa22.58■■□□□ 1.21
ITGB4-205ENST00000579211 C8orf58Q8NAV2 365 aa22.58■■□□□ 1.21
ITGB4-205ENST00000579211 ZNF622Q969S3 477 aaKnown RBP eCLIP22.58■■□□□ 1.21
ITGB4-205ENST00000579211 CCDC88AQ3V6T2 1871 aa22.57■■□□□ 1.2
ITGB4-205ENST00000579211 HSP90AB3PQ58FF7 597 aa22.56■■□□□ 1.2
ITGB4-205ENST00000579211 CCDC30Q5VVM6 783 aa22.56■■□□□ 1.2
ITGB4-205ENST00000579211 COL11A2P13942 1736 aaPredicted RBP22.56■■□□□ 1.2
ITGB4-205ENST00000579211 LRP10Q7Z4F1 713 aa22.55■■□□□ 1.2
ITGB4-205ENST00000579211 PPP1R42Q7Z4L9 355 aa22.55■■□□□ 1.2
ITGB4-205ENST00000579211 TTLL6Q8N841 843 aa22.55■■□□□ 1.2
ITGB4-205ENST00000579211 ARFGEF2Q9Y6D5 1785 aa22.55■■□□□ 1.2
ITGB4-205ENST00000579211 ATP10DQ9P241 1426 aa22.55■■□□□ 1.2
ITGB4-205ENST00000579211 GOLGA2Q08379 1002 aa22.53■■□□□ 1.2
ITGB4-205ENST00000579211 TWISTNBQ3B726 338 aaPredicted RBP22.53■■□□□ 1.2
ITGB4-205ENST00000579211 PARP10Q53GL7 1025 aa22.53■■□□□ 1.2
ITGB4-205ENST00000579211 ANKRD13DQ6ZTN6 518 aa22.53■■□□□ 1.2
ITGB4-205ENST00000579211 ZNF34Q8IZ26 560 aa22.53■■□□□ 1.2
ITGB4-205ENST00000579211 STK31Q9BXU1 1019 aa22.53■■□□□ 1.2
ITGB4-205ENST00000579211 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
ITGB4-205ENST00000579211 MYH16Q9H6N6 1097 aa22.52■■□□□ 1.2
ITGB4-205ENST00000579211 SBF1O95248 1867 aa22.51■■□□□ 1.19
ITGB4-205ENST00000579211 SUSD4Q5VX71 490 aa22.51■■□□□ 1.19
ITGB4-205ENST00000579211 RIC3Q7Z5B4 369 aa22.51■■□□□ 1.19
ITGB4-205ENST00000579211 NUTM1Q86Y26 1132 aa22.51■■□□□ 1.19
ITGB4-205ENST00000579211 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
ITGB4-205ENST00000579211 FANCIQ9NVI1 1328 aa22.51■■□□□ 1.19
ITGB4-205ENST00000579211 TCIRG1Q13488 830 aa22.5■■□□□ 1.19
ITGB4-205ENST00000579211 ERFEQ4G0M1 354 aa22.5■■□□□ 1.19
ITGB4-205ENST00000579211 CNKSR1Q969H4 720 aa22.5■■□□□ 1.19
ITGB4-205ENST00000579211 MASTLQ96GX5 879 aa22.5■■□□□ 1.19
ITGB4-205ENST00000579211 UTP14AQ9BVJ6 771 aaKnown RBP22.5■■□□□ 1.19
ITGB4-205ENST00000579211 UBN2Q6ZU65 1347 aa22.5■■□□□ 1.19
ITGB4-205ENST00000579211 SLX4Q8IY92 1834 aa22.5■■□□□ 1.19
ITGB4-205ENST00000579211 PHAXQ9H814 394 aaKnown RBP22.49■■□□□ 1.19
ITGB4-205ENST00000579211 ZNF219Q9P2Y4 722 aaPredicted RBP22.49■■□□□ 1.19
ITGB4-205ENST00000579211 TCERG1O14776 1098 aaKnown RBP22.48■■□□□ 1.19
ITGB4-205ENST00000579211 DDX58O95786 925 aaKnown RBP22.48■■□□□ 1.19
ITGB4-205ENST00000579211 SRGNP10124 158 aa22.48■■□□□ 1.19
ITGB4-205ENST00000579211 STYK1Q6J9G0 422 aa22.48■■□□□ 1.19
ITGB4-205ENST00000579211 NPR1P16066 1061 aa22.47■■□□□ 1.19
ITGB4-205ENST00000579211 EXOSC9Q06265 439 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms