RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 A0A1W2PNR3 127 aa8.6□□□□□ -1.03
PTPRM-207ENST00000578571 VSIG8P0DPA2 414 aa8.6□□□□□ -1.03
PTPRM-207ENST00000578571 PGBD3Q8N328 593 aa8.6□□□□□ -1.03
PTPRM-207ENST00000578571 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
PTPRM-207ENST00000578571 RHPN1Q8TCX5 695 aa8.6□□□□□ -1.03
PTPRM-207ENST00000578571 NUCKS1Q9H1E3 243 aaKnown RBP8.6□□□□□ -1.03
PTPRM-207ENST00000578571 CDC14CA4D256 554 aa8.59□□□□□ -1.03
PTPRM-207ENST00000578571 H7C1W4 665 aa8.59□□□□□ -1.03
PTPRM-207ENST00000578571 PDE4CQ08493 712 aa8.59□□□□□ -1.03
PTPRM-207ENST00000578571 LBRQ14739 615 aaKnown RBP8.59□□□□□ -1.03
PTPRM-207ENST00000578571 RTN1Q16799 776 aa8.59□□□□□ -1.03
PTPRM-207ENST00000578571 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
PTPRM-207ENST00000578571 VTI1AQ96AJ9 217 aa8.59□□□□□ -1.03
PTPRM-207ENST00000578571 GMCL1Q96IK5 515 aa8.59□□□□□ -1.03
PTPRM-207ENST00000578571 GPC6Q9Y625 555 aaPredicted RBP8.59□□□□□ -1.03
PTPRM-207ENST00000578571 BICDL1Q6ZP65 573 aa8.58□□□□□ -1.04
PTPRM-207ENST00000578571 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
PTPRM-207ENST00000578571 MYO19Q96H55 970 aa8.58□□□□□ -1.04
PTPRM-207ENST00000578571 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
PTPRM-207ENST00000578571 PTCD1O75127 700 aaKnown RBP8.57□□□□□ -1.04
PTPRM-207ENST00000578571 EFHC2Q5JST6 749 aa8.57□□□□□ -1.04
PTPRM-207ENST00000578571 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
PTPRM-207ENST00000578571 SV2AQ7L0J3 742 aa8.57□□□□□ -1.04
PTPRM-207ENST00000578571 NLRP8Q86W28 1048 aa8.57□□□□□ -1.04
PTPRM-207ENST00000578571 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
PTPRM-207ENST00000578571 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
PTPRM-207ENST00000578571 SEPT3Q9UH03 358 aa8.57□□□□□ -1.04
PTPRM-207ENST00000578571 LRFN2Q9ULH4 789 aa8.57□□□□□ -1.04
PTPRM-207ENST00000578571 WFS1O76024 890 aa8.56□□□□□ -1.04
PTPRM-207ENST00000578571 NAA30Q147X3 362 aaPredicted RBP8.56□□□□□ -1.04
PTPRM-207ENST00000578571 COX20Q5RI15 118 aa8.56□□□□□ -1.04
PTPRM-207ENST00000578571 TREML4Q6UXN2 200 aa8.56□□□□□ -1.04
PTPRM-207ENST00000578571 LRRC69Q6ZNQ3 347 aa8.56□□□□□ -1.04
PTPRM-207ENST00000578571 ZNF280CQ8ND82 737 aa8.56□□□□□ -1.04
PTPRM-207ENST00000578571 HSH2DQ96JZ2 352 aa8.56□□□□□ -1.04
PTPRM-207ENST00000578571 B4GALNT3Q6L9W6 998 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 IRF7Q92985 503 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 SUSD3Q96L08 255 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 TRAIPQ9BWF2 469 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
PTPRM-207ENST00000578571 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.55□□□□□ -1.04
PTPRM-207ENST00000578571 NDFIP2Q9NV92 336 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 KLK14Q9P0G3 267 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 CCDC88BA6NC98 1476 aa8.55□□□□□ -1.04
PTPRM-207ENST00000578571 GPR25O00155 361 aa8.54□□□□□ -1.04
PTPRM-207ENST00000578571 DGKZQ13574 1117 aa8.54□□□□□ -1.04
PTPRM-207ENST00000578571 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
PTPRM-207ENST00000578571 C16orf46Q6P387 395 aa8.54□□□□□ -1.04
PTPRM-207ENST00000578571 LAMC3Q9Y6N6 1575 aa8.53□□□□□ -1.04
PTPRM-207ENST00000578571 TNFRSF10BO14763 440 aa8.53□□□□□ -1.04
PTPRM-207ENST00000578571 BNIP3LO60238 219 aa8.53□□□□□ -1.04
PTPRM-207ENST00000578571 GAS6Q14393 721 aa8.53□□□□□ -1.04
PTPRM-207ENST00000578571 HCN2Q9UL51 889 aa8.53□□□□□ -1.04
PTPRM-207ENST00000578571 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
PTPRM-207ENST00000578571 C11orf91Q3C1V1 193 aa8.52□□□□□ -1.05
PTPRM-207ENST00000578571 FIGNL1Q6PIW4 674 aa8.52□□□□□ -1.05
PTPRM-207ENST00000578571 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
PTPRM-207ENST00000578571 ANKIB1Q9P2G1 1089 aa8.52□□□□□ -1.05
PTPRM-207ENST00000578571 DMGDHQ9UI17 866 aaKnown RBP8.52□□□□□ -1.05
PTPRM-207ENST00000578571 PCDHGC4Q9Y5F7 938 aa8.52□□□□□ -1.05
PTPRM-207ENST00000578571 GJA3Q9Y6H8 435 aa8.52□□□□□ -1.05
PTPRM-207ENST00000578571 CADPSQ9ULU8 1353 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 TGFBR3LH3BV60 316 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 BRD1O95696 1058 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 FAM157BP0CG42 384 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 KRT76Q01546 638 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 NEUROD4Q9HD90 331 aa8.51□□□□□ -1.05
PTPRM-207ENST00000578571 EFSO43281 561 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 GMPRP36959 345 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 TNP2Q05952 138 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 HIF1AQ16665 826 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 IER5Q5VY09 327 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 BTLAQ7Z6A9 289 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 TXNDC2Q86VQ3 553 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 GTF3C2Q8WUA4 911 aaPredicted RBP8.5□□□□□ -1.05
PTPRM-207ENST00000578571 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
PTPRM-207ENST00000578571 COL25A1Q9BXS0 654 aaPredicted RBP8.5□□□□□ -1.05
PTPRM-207ENST00000578571 ATXN7L1Q9ULK2 861 aaPredicted RBP8.5□□□□□ -1.05
PTPRM-207ENST00000578571 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
PTPRM-207ENST00000578571 PDS5BQ9NTI5 1447 aa8.49□□□□□ -1.05
PTPRM-207ENST00000578571 DCDC2BA2VCK2 349 aa8.49□□□□□ -1.05
PTPRM-207ENST00000578571 MAPTP10636 758 aaKnown RBP8.49□□□□□ -1.05
PTPRM-207ENST00000578571 ARID4AP29374 1257 aaPredicted RBP8.49□□□□□ -1.05
PTPRM-207ENST00000578571 TYRO3Q06418 890 aa8.49□□□□□ -1.05
PTPRM-207ENST00000578571 HELQQ8TDG4 1101 aa8.49□□□□□ -1.05
PTPRM-207ENST00000578571 IFT43Q96FT9 208 aa8.49□□□□□ -1.05
PTPRM-207ENST00000578571 TRERF1Q96PN7 1200 aa8.49□□□□□ -1.05
PTPRM-207ENST00000578571 CFTRP13569 1480 aa8.49□□□□□ -1.05
PTPRM-207ENST00000578571 KHNYNO15037 678 aaKnown RBP8.48□□□□□ -1.05
PTPRM-207ENST00000578571 PDIA4P13667 645 aaKnown RBP8.48□□□□□ -1.05
PTPRM-207ENST00000578571 ETFBKMTQ8IXQ9 262 aa8.48□□□□□ -1.05
PTPRM-207ENST00000578571 STRN4Q9NRL3 753 aa8.48□□□□□ -1.05
PTPRM-207ENST00000578571 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
PTPRM-207ENST00000578571 MICAL2O94851 1124 aa8.47□□□□□ -1.05
PTPRM-207ENST00000578571 FGFR3P22607 806 aa8.47□□□□□ -1.05
PTPRM-207ENST00000578571 SERPINB4P48594 390 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms