RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 ZBTB3Q9H5J0 574 aa19.79■□□□□ 0.76
SMG6-220ENST00000576218 PIM2Q9P1W9 311 aa19.79■□□□□ 0.76
SMG6-220ENST00000576218 FAM177BA6PVY3 158 aa19.78■□□□□ 0.76
SMG6-220ENST00000576218 GTF2E1P29083 439 aaPredicted RBP19.78■□□□□ 0.76
SMG6-220ENST00000576218 AFDNP55196 1824 aaKnown RBP19.78■□□□□ 0.76
SMG6-220ENST00000576218 MAP3K15Q6ZN16 1313 aa19.77■□□□□ 0.76
SMG6-220ENST00000576218 HOXB7P09629 217 aa19.77■□□□□ 0.76
SMG6-220ENST00000576218 AIMP1Q12904 312 aaKnown RBP19.77■□□□□ 0.76
SMG6-220ENST00000576218 DUSP27Q5VZP5 1158 aa19.77■□□□□ 0.76
SMG6-220ENST00000576218 C2CD5Q86YS7 1000 aa19.77■□□□□ 0.76
SMG6-220ENST00000576218 ERVV-1B6SEH8 477 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 H0YIN7 160 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 RGL2O15211 777 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 ANXA1P04083 346 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 PDE6BP35913 854 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 DALRD3Q5D0E6 543 aaKnown RBP19.76■□□□□ 0.75
SMG6-220ENST00000576218 PRR5LQ6MZQ0 368 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 TTLL7Q6ZT98 887 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 CCDC24Q8N4L8 307 aa19.76■□□□□ 0.75
SMG6-220ENST00000576218 CHD4Q14839 1912 aa19.75■□□□□ 0.75
SMG6-220ENST00000576218 HLFQ16534 295 aa19.75■□□□□ 0.75
SMG6-220ENST00000576218 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
SMG6-220ENST00000576218 WWC1Q8IX03 1113 aa19.75■□□□□ 0.75
SMG6-220ENST00000576218 NRXN2Q9P2S2 1712 aa19.75■□□□□ 0.75
SMG6-220ENST00000576218 ELL2O00472 640 aaPredicted RBP19.74■□□□□ 0.75
SMG6-220ENST00000576218 ZNF853P0CG23 659 aa19.74■□□□□ 0.75
SMG6-220ENST00000576218 PROSER3Q2NL68 480 aa19.74■□□□□ 0.75
SMG6-220ENST00000576218 TPTE2Q6XPS3 522 aa19.74■□□□□ 0.75
SMG6-220ENST00000576218 DDX21Q9NR30 783 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMG6-220ENST00000576218 CHPF2Q9P2E5 772 aa19.74■□□□□ 0.75
SMG6-220ENST00000576218 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
SMG6-220ENST00000576218 GPTP24298 496 aa19.73■□□□□ 0.75
SMG6-220ENST00000576218 ARHGAP27Q6ZUM4 889 aa19.73■□□□□ 0.75
SMG6-220ENST00000576218 XAGE3Q8WTP9 111 aa19.73■□□□□ 0.75
SMG6-220ENST00000576218 ZNF622Q969S3 477 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMG6-220ENST00000576218 BRIP1Q9BX63 1249 aa19.73■□□□□ 0.75
SMG6-220ENST00000576218 CHMP4AQ9BY43 222 aa19.73■□□□□ 0.75
SMG6-220ENST00000576218 DBF4Q9UBU7 674 aaPredicted RBP19.73■□□□□ 0.75
SMG6-220ENST00000576218 PDZRN3Q9UPQ7 1066 aa19.73■□□□□ 0.75
SMG6-220ENST00000576218 PDIA6Q15084 440 aa19.72■□□□□ 0.75
SMG6-220ENST00000576218 COPS6Q7L5N1 327 aa19.72■□□□□ 0.75
SMG6-220ENST00000576218 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
SMG6-220ENST00000576218 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
SMG6-220ENST00000576218 GOLGB1Q14789 3259 aaKnown RBP19.72■□□□□ 0.75
SMG6-220ENST00000576218 KCNA3P22001 575 aa19.71■□□□□ 0.75
SMG6-220ENST00000576218 ATP10DQ9P241 1426 aa19.7■□□□□ 0.74
SMG6-220ENST00000576218 GIGYF2Q6Y7W6 1299 aaKnown RBP19.7■□□□□ 0.74
SMG6-220ENST00000576218 TTLL6Q8N841 843 aa19.7■□□□□ 0.74
SMG6-220ENST00000576218 HYPKQ9NX55 129 aa19.7■□□□□ 0.74
SMG6-220ENST00000576218 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
SMG6-220ENST00000576218 HSP90AB3PQ58FF7 597 aa19.69■□□□□ 0.74
SMG6-220ENST00000576218 IL16Q14005 1332 aa19.69■□□□□ 0.74
SMG6-220ENST00000576218 UTRNP46939 3433 aa19.68■□□□□ 0.74
SMG6-220ENST00000576218 PPP1R42Q7Z4L9 355 aa19.68■□□□□ 0.74
SMG6-220ENST00000576218 C8orf58Q8NAV2 365 aa19.68■□□□□ 0.74
SMG6-220ENST00000576218 NUP98P52948 1817 aa19.67■□□□□ 0.74
SMG6-220ENST00000576218 GOLGA2Q08379 1002 aa19.67■□□□□ 0.74
SMG6-220ENST00000576218 PARP10Q53GL7 1025 aa19.67■□□□□ 0.74
SMG6-220ENST00000576218 CCDC30Q5VVM6 783 aa19.67■□□□□ 0.74
SMG6-220ENST00000576218 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
SMG6-220ENST00000576218 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
SMG6-220ENST00000576218 BRCA1P38398 1863 aaKnown RBP19.67■□□□□ 0.74
SMG6-220ENST00000576218 LRP10Q7Z4F1 713 aa19.66■□□□□ 0.74
SMG6-220ENST00000576218 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
SMG6-220ENST00000576218 CNKSR1Q969H4 720 aa19.66■□□□□ 0.74
SMG6-220ENST00000576218 ZNF219Q9P2Y4 722 aaPredicted RBP19.66■□□□□ 0.74
SMG6-220ENST00000576218 ANKRD31Q8N7Z5 1873 aa19.65■□□□□ 0.74
SMG6-220ENST00000576218 ZNF784Q8NCA9 323 aaPredicted RBP19.65■□□□□ 0.74
SMG6-220ENST00000576218 MASTLQ96GX5 879 aa19.65■□□□□ 0.74
SMG6-220ENST00000576218 MYH16Q9H6N6 1097 aa19.65■□□□□ 0.74
SMG6-220ENST00000576218 UBN2Q6ZU65 1347 aa19.65■□□□□ 0.74
SMG6-220ENST00000576218 CCER2I3L3R5 266 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 TWISTNBQ3B726 338 aaPredicted RBP19.64■□□□□ 0.73
SMG6-220ENST00000576218 ERFEQ4G0M1 354 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 SUSD4Q5VX71 490 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 DIEXFQ68CQ4 756 aaKnown RBP19.64■□□□□ 0.73
SMG6-220ENST00000576218 STYK1Q6J9G0 422 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 ANKRD13DQ6ZTN6 518 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 RIC3Q7Z5B4 369 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 ZNF34Q8IZ26 560 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 PLBD2Q8NHP8 589 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 UTP14AQ9BVJ6 771 aaKnown RBP19.64■□□□□ 0.73
SMG6-220ENST00000576218 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 DLEC1Q9Y238 1755 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 ARFGEF1Q9Y6D6 1849 aa19.64■□□□□ 0.73
SMG6-220ENST00000576218 IBTKQ9P2D0 1353 aaPredicted RBP19.63■□□□□ 0.73
SMG6-220ENST00000576218 SRGNP10124 158 aa19.63■□□□□ 0.73
SMG6-220ENST00000576218 NPR1P16066 1061 aa19.63■□□□□ 0.73
SMG6-220ENST00000576218 TSPYL6Q8N831 410 aa19.63■□□□□ 0.73
SMG6-220ENST00000576218 COL11A2P13942 1736 aaPredicted RBP19.62■□□□□ 0.73
SMG6-220ENST00000576218 DDX58O95786 925 aaKnown RBP19.62■□□□□ 0.73
SMG6-220ENST00000576218 RPGRQ92834 1020 aaKnown RBP19.62■□□□□ 0.73
SMG6-220ENST00000576218 ABCC12Q96J65 1359 aa19.61■□□□□ 0.73
SMG6-220ENST00000576218 TCERG1O14776 1098 aaKnown RBP19.61■□□□□ 0.73
SMG6-220ENST00000576218 TCIRG1Q13488 830 aa19.61■□□□□ 0.73
SMG6-220ENST00000576218 ZNF526Q8TF50 670 aaPredicted RBP19.61■□□□□ 0.73
SMG6-220ENST00000576218 C21orf2O43822 256 aa19.6■□□□□ 0.73
SMG6-220ENST00000576218 NTSR2O95665 410 aa19.6■□□□□ 0.73
SMG6-220ENST00000576218 PRPF40BQ6NWY9 871 aaKnown RBP19.6■□□□□ 0.73
SMG6-220ENST00000576218 PHAXQ9H814 394 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms