RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SLC52A2Q9HAB3 445 aa8.09□□□□□ -1.11
SMG6-219ENST00000575663 STARD3NLO95772 234 aa8.08□□□□□ -1.12
SMG6-219ENST00000575663 SRGNP10124 158 aa8.08□□□□□ -1.12
SMG6-219ENST00000575663 LMOD1P29536 600 aaPredicted RBP8.08□□□□□ -1.12
SMG6-219ENST00000575663 TBC1D9BQ66K14 1250 aa8.08□□□□□ -1.12
SMG6-219ENST00000575663 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
SMG6-219ENST00000575663 ZNF330Q9Y3S2 320 aaPredicted RBP8.08□□□□□ -1.12
SMG6-219ENST00000575663 COL11A2P13942 1736 aaPredicted RBP8.08□□□□□ -1.12
SMG6-219ENST00000575663 FER1L6Q2WGJ9 1857 aa8.08□□□□□ -1.12
SMG6-219ENST00000575663 DICER1Q9UPY3 1922 aaKnown RBP8.07□□□□□ -1.12
SMG6-219ENST00000575663 ADAMTSL1Q8N6G6 1762 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 MAP2K2P36507 400 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 SLC39A6Q13433 755 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 DGKZQ13574 1117 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
SMG6-219ENST00000575663 AEBP1Q8IUX7 1158 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 TTC5Q8N0Z6 440 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 GPC2Q8N158 579 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 SETDB2Q96T68 719 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 ZNF277Q9NRM2 450 aaPredicted RBP8.07□□□□□ -1.12
SMG6-219ENST00000575663 TSKSQ9UJT2 592 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 SCN7AQ01118 1682 aa8.07□□□□□ -1.12
SMG6-219ENST00000575663 IARSP41252 1262 aaKnown RBP8.06□□□□□ -1.12
SMG6-219ENST00000575663 EIF5P55010 431 aaKnown RBP8.06□□□□□ -1.12
SMG6-219ENST00000575663 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
SMG6-219ENST00000575663 SULT6B1Q6IMI4 303 aa8.06□□□□□ -1.12
SMG6-219ENST00000575663 RTKN2Q8IZC4 609 aa8.06□□□□□ -1.12
SMG6-219ENST00000575663 CCDC24Q8N4L8 307 aa8.06□□□□□ -1.12
SMG6-219ENST00000575663 JDP2Q8WYK2 163 aa8.06□□□□□ -1.12
SMG6-219ENST00000575663 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
SMG6-219ENST00000575663 LTBP1Q14766 1721 aa8.06□□□□□ -1.12
SMG6-219ENST00000575663 CCDC88AQ3V6T2 1871 aa8.05□□□□□ -1.12
SMG6-219ENST00000575663 FZD9O00144 591 aa8.05□□□□□ -1.12
SMG6-219ENST00000575663 NPR1P16066 1061 aa8.05□□□□□ -1.12
SMG6-219ENST00000575663 EIF6P56537 245 aaKnown RBP8.05□□□□□ -1.12
SMG6-219ENST00000575663 TEX13AQ9BXU3 409 aaPredicted RBP8.05□□□□□ -1.12
SMG6-219ENST00000575663 ANKRD31Q8N7Z5 1873 aa8.04□□□□□ -1.12
SMG6-219ENST00000575663 RNMTO43148 476 aaKnown RBP8.04□□□□□ -1.12
SMG6-219ENST00000575663 IL6STP40189 918 aaPredicted RBP8.04□□□□□ -1.12
SMG6-219ENST00000575663 USP50Q70EL3 339 aaPredicted RBP8.04□□□□□ -1.12
SMG6-219ENST00000575663 NBPF5PQ86XG9 351 aaPredicted RBP8.04□□□□□ -1.12
SMG6-219ENST00000575663 C7orf43Q8WVR3 580 aa8.04□□□□□ -1.12
SMG6-219ENST00000575663 TBC1D2BQ9UPU7 963 aa8.04□□□□□ -1.12
SMG6-219ENST00000575663 GJA3Q9Y6H8 435 aa8.04□□□□□ -1.12
SMG6-219ENST00000575663 ARFGEF2Q9Y6D5 1785 aa8.03□□□□□ -1.12
SMG6-219ENST00000575663 AOC2O75106 756 aa8.03□□□□□ -1.12
SMG6-219ENST00000575663 SAPCD2Q86UD0 394 aa8.03□□□□□ -1.12
SMG6-219ENST00000575663 HHIPL1Q96JK4 782 aa8.03□□□□□ -1.12
SMG6-219ENST00000575663 PSMD1Q99460 953 aa8.03□□□□□ -1.12
SMG6-219ENST00000575663 LGR6Q9HBX8 967 aa8.03□□□□□ -1.12
SMG6-219ENST00000575663 ZNF652Q9Y2D9 606 aa8.03□□□□□ -1.12
SMG6-219ENST00000575663 SCN11AQ9UI33 1791 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 HEG1Q9ULI3 1381 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 CAMTA2O94983 1202 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 CELF2O95319 508 aaKnown RBP8.02□□□□□ -1.13
SMG6-219ENST00000575663 ALDH1B1P30837 517 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 SOX10P56693 466 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 NOGQ13253 232 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
SMG6-219ENST00000575663 SYNE4Q8N205 404 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 GCC1Q96CN9 775 aa8.02□□□□□ -1.13
SMG6-219ENST00000575663 SLX4Q8IY92 1834 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 TRAF5O00463 557 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 SCNN1DP51172 638 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 FMR1Q06787 632 aaKnown RBP eCLIP8.01□□□□□ -1.13
SMG6-219ENST00000575663 TEFQ10587 303 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 CST9Q5W186 159 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 CC2D2BQ6DHV5 1058 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 CLEC4GQ6UXB4 293 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 TPTE2Q6XPS3 522 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
SMG6-219ENST00000575663 ADARB2Q9NS39 739 aaKnown RBP8.01□□□□□ -1.13
SMG6-219ENST00000575663 BCORQ6W2J9 1755 aa8□□□□□ -1.13
SMG6-219ENST00000575663 KLRG2A4D1S0 409 aaPredicted RBP8□□□□□ -1.13
SMG6-219ENST00000575663 IL13P35225 146 aa8□□□□□ -1.13
SMG6-219ENST00000575663 EPS15P42566 896 aa8□□□□□ -1.13
SMG6-219ENST00000575663 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
SMG6-219ENST00000575663 CIAPIN1Q6FI81 312 aa8□□□□□ -1.13
SMG6-219ENST00000575663 ZNF790Q6PG37 636 aa8□□□□□ -1.13
SMG6-219ENST00000575663 MORC1Q86VD1 984 aa8□□□□□ -1.13
SMG6-219ENST00000575663 LARGE2Q8N3Y3 721 aa8□□□□□ -1.13
SMG6-219ENST00000575663 NBPF15Q8N660 670 aa8□□□□□ -1.13
SMG6-219ENST00000575663 ZNF496Q96IT1 587 aaPredicted RBP8□□□□□ -1.13
SMG6-219ENST00000575663 FMNL2Q96PY5 1086 aa8□□□□□ -1.13
SMG6-219ENST00000575663 ZNF408Q9H9D4 720 aa8□□□□□ -1.13
SMG6-219ENST00000575663 SAGE1Q9NXZ1 904 aa8□□□□□ -1.13
SMG6-219ENST00000575663 UBR2Q8IWV8 1755 aa7.99□□□□□ -1.13
SMG6-219ENST00000575663 GTF2E1P29083 439 aaPredicted RBP7.99□□□□□ -1.13
SMG6-219ENST00000575663 OLFM4Q6UX06 510 aa7.99□□□□□ -1.13
SMG6-219ENST00000575663 NIM1KQ8IY84 436 aa7.99□□□□□ -1.13
SMG6-219ENST00000575663 CACNA1SQ13698 1873 aa7.98□□□□□ -1.13
SMG6-219ENST00000575663 SNED1Q8TER0 1413 aa7.98□□□□□ -1.13
SMG6-219ENST00000575663 RGL2O15211 777 aa7.98□□□□□ -1.13
SMG6-219ENST00000575663 HMOX1P09601 288 aa7.98□□□□□ -1.13
SMG6-219ENST00000575663 MTHFSDQ2M296 383 aaKnown RBP7.98□□□□□ -1.13
SMG6-219ENST00000575663 TMX4Q9H1E5 349 aaPredicted RBP7.98□□□□□ -1.13
SMG6-219ENST00000575663 GPRC5DQ9NZD1 345 aa7.98□□□□□ -1.13
SMG6-219ENST00000575663 NIP7Q9Y221 180 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMG6-219ENST00000575663 CDHR2Q9BYE9 1310 aa7.98□□□□□ -1.13
SMG6-219ENST00000575663 A1BGP04217 495 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms