RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 GPC2Q8N158 579 aa11.81□□□□□ -0.52
SMG1-216ENST00000569122 JDP2Q8WYK2 163 aa11.81□□□□□ -0.52
SMG1-216ENST00000569122 CFAP44Q96MT7 982 aa11.81□□□□□ -0.52
SMG1-216ENST00000569122 LGR6Q9HBX8 967 aa11.81□□□□□ -0.52
SMG1-216ENST00000569122 DDX21Q9NR30 783 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMG1-216ENST00000569122 LMOD1P29536 600 aaPredicted RBP11.8□□□□□ -0.52
SMG1-216ENST00000569122 MAP1SQ66K74 1059 aaPredicted RBP11.8□□□□□ -0.52
SMG1-216ENST00000569122 CAPNS2Q96L46 248 aa11.8□□□□□ -0.52
SMG1-216ENST00000569122 FZD9O00144 591 aa11.79□□□□□ -0.52
SMG1-216ENST00000569122 ALDH1B1P30837 517 aa11.79□□□□□ -0.52
SMG1-216ENST00000569122 EIF6P56537 245 aaKnown RBP11.79□□□□□ -0.52
SMG1-216ENST00000569122 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
SMG1-216ENST00000569122 C7orf43Q8WVR3 580 aa11.79□□□□□ -0.52
SMG1-216ENST00000569122 TBC1D2BQ9UPU7 963 aa11.79□□□□□ -0.52
SMG1-216ENST00000569122 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
SMG1-216ENST00000569122 TIAM2Q8IVF5 1701 aa11.79□□□□□ -0.52
SMG1-216ENST00000569122 NRXN2Q9P2S2 1712 aa11.79□□□□□ -0.52
SMG1-216ENST00000569122 IL13P35225 146 aa11.78□□□□□ -0.52
SMG1-216ENST00000569122 IARSP41252 1262 aaKnown RBP11.78□□□□□ -0.52
SMG1-216ENST00000569122 GRIPAP1Q4V328 841 aa11.78□□□□□ -0.52
SMG1-216ENST00000569122 TPTE2Q6XPS3 522 aa11.78□□□□□ -0.52
SMG1-216ENST00000569122 NBPF5PQ86XG9 351 aaPredicted RBP11.78□□□□□ -0.52
SMG1-216ENST00000569122 POLR3GLQ9BT43 218 aa11.78□□□□□ -0.52
SMG1-216ENST00000569122 ZNF277Q9NRM2 450 aaPredicted RBP11.78□□□□□ -0.52
SMG1-216ENST00000569122 ZNF652Q9Y2D9 606 aa11.78□□□□□ -0.52
SMG1-216ENST00000569122 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
SMG1-216ENST00000569122 CCDC24Q8N4L8 307 aa11.77□□□□□ -0.53
SMG1-216ENST00000569122 RNF123Q5XPI4 1314 aa11.77□□□□□ -0.53
SMG1-216ENST00000569122 ZNF541Q9H0D2 1346 aa11.77□□□□□ -0.53
SMG1-216ENST00000569122 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 KLRG2A4D1S0 409 aaPredicted RBP11.76□□□□□ -0.53
SMG1-216ENST00000569122 RGL2O15211 777 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 TEFQ10587 303 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 USP50Q70EL3 339 aaPredicted RBP11.76□□□□□ -0.53
SMG1-216ENST00000569122 SYNE4Q8N205 404 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 FMNL2Q96PY5 1086 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 PSMD1Q99460 953 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 MCOLN1Q9GZU1 580 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 TLL2Q9Y6L7 1015 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 TJP1Q07157 1748 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 DLEC1Q9Y238 1755 aa11.76□□□□□ -0.53
SMG1-216ENST00000569122 SCN4AP35499 1836 aa11.75□□□□□ -0.53
SMG1-216ENST00000569122 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
SMG1-216ENST00000569122 BRPF1P55201 1214 aaPredicted RBP11.75□□□□□ -0.53
SMG1-216ENST00000569122 GRM1Q13255 1194 aa11.75□□□□□ -0.53
SMG1-216ENST00000569122 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
SMG1-216ENST00000569122 ZNF790Q6PG37 636 aa11.75□□□□□ -0.53
SMG1-216ENST00000569122 DZIP3Q86Y13 1208 aaKnown RBP11.75□□□□□ -0.53
SMG1-216ENST00000569122 PANK3Q9H999 370 aa11.75□□□□□ -0.53
SMG1-216ENST00000569122 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
SMG1-216ENST00000569122 KNSTRNQ9Y448 316 aa11.74□□□□□ -0.53
SMG1-216ENST00000569122 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
SMG1-216ENST00000569122 HEG1Q9ULI3 1381 aa11.74□□□□□ -0.53
SMG1-216ENST00000569122 MRC1P22897 1456 aa11.74□□□□□ -0.53
SMG1-216ENST00000569122 GTF2E1P29083 439 aaPredicted RBP11.73□□□□□ -0.53
SMG1-216ENST00000569122 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
SMG1-216ENST00000569122 DGKZQ13574 1117 aa11.73□□□□□ -0.53
SMG1-216ENST00000569122 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
SMG1-216ENST00000569122 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
SMG1-216ENST00000569122 TIMELESSQ9UNS1 1208 aa11.73□□□□□ -0.53
SMG1-216ENST00000569122 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
SMG1-216ENST00000569122 CST9Q5W186 159 aa11.72□□□□□ -0.53
SMG1-216ENST00000569122 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
SMG1-216ENST00000569122 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
SMG1-216ENST00000569122 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
SMG1-216ENST00000569122 A1BGP04217 495 aa11.71□□□□□ -0.53
SMG1-216ENST00000569122 HMOX1P09601 288 aa11.71□□□□□ -0.53
SMG1-216ENST00000569122 SAPCD2Q86UD0 394 aa11.71□□□□□ -0.53
SMG1-216ENST00000569122 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
SMG1-216ENST00000569122 ADARB2Q9NS39 739 aaKnown RBP11.71□□□□□ -0.53
SMG1-216ENST00000569122 AOC2O75106 756 aa11.7□□□□□ -0.54
SMG1-216ENST00000569122 CELF2O95319 508 aaKnown RBP11.7□□□□□ -0.54
SMG1-216ENST00000569122 NOGQ13253 232 aa11.7□□□□□ -0.54
SMG1-216ENST00000569122 LARGE2Q8N3Y3 721 aa11.7□□□□□ -0.54
SMG1-216ENST00000569122 NYXQ9GZU5 481 aa11.7□□□□□ -0.54
SMG1-216ENST00000569122 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
SMG1-216ENST00000569122 NIP7Q9Y221 180 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMG1-216ENST00000569122 CCDC88AQ3V6T2 1871 aa11.7□□□□□ -0.54
SMG1-216ENST00000569122 VIRMAQ69YN4 1812 aaKnown RBP11.7□□□□□ -0.54
SMG1-216ENST00000569122 DIAPH1O60610 1272 aaKnown RBP11.69□□□□□ -0.54
SMG1-216ENST00000569122 EPS15P42566 896 aa11.69□□□□□ -0.54
SMG1-216ENST00000569122 SCNN1DP51172 638 aa11.69□□□□□ -0.54
SMG1-216ENST00000569122 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
SMG1-216ENST00000569122 NIM1KQ8IY84 436 aa11.69□□□□□ -0.54
SMG1-216ENST00000569122 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
SMG1-216ENST00000569122 BTBD11A6QL63 1104 aa11.68□□□□□ -0.54
SMG1-216ENST00000569122 SCN11AQ9UI33 1791 aa11.67□□□□□ -0.54
SMG1-216ENST00000569122 TRAF5O00463 557 aa11.67□□□□□ -0.54
SMG1-216ENST00000569122 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
SMG1-216ENST00000569122 CDC37L1Q7L3B6 337 aa11.67□□□□□ -0.54
SMG1-216ENST00000569122 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
SMG1-216ENST00000569122 RPGRQ92834 1020 aaKnown RBP11.67□□□□□ -0.54
SMG1-216ENST00000569122 SAGE1Q9NXZ1 904 aa11.67□□□□□ -0.54
SMG1-216ENST00000569122 ADAMTSL1Q8N6G6 1762 aa11.67□□□□□ -0.54
SMG1-216ENST00000569122 SLX4Q8IY92 1834 aa11.66□□□□□ -0.54
SMG1-216ENST00000569122 EIF4G2P78344 907 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMG1-216ENST00000569122 CRY2Q49AN0 593 aa11.66□□□□□ -0.54
SMG1-216ENST00000569122 CIAPIN1Q6FI81 312 aa11.66□□□□□ -0.54
SMG1-216ENST00000569122 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms