RNA–Protein interactions for RNA: ENST00000567306.5

PDXDC1-215, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-215ENST00000567306 PI4KAP2A4QPH2 592 aa9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 ZBTB7BO15156 539 aaPredicted RBP9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 A1BGP04217 495 aa9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 CCT4P50991 539 aaKnown RBP9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 RBM6P78332 1123 aaKnown RBP9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 AIMP1Q12904 312 aaKnown RBP9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 AAMPQ13685 434 aa9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 PI4KAP1Q8N8J0 262 aa9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 MEIS3Q99687 375 aa9.44□□□□□ -0.9
PDXDC1-215ENST00000567306 LOC102724428A0A0B4J2F2 783 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 IGHDP01880 384 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 SIK1P57059 783 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 ITPK1Q13572 414 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 KSR2Q6VAB6 950 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 COPS6Q7L5N1 327 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 KRT27Q7Z3Y8 459 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 DNAAF4Q8WXU2 420 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 MAP3K2Q9Y2U5 619 aa9.43□□□□□ -0.9
PDXDC1-215ENST00000567306 LY75O60449 1722 aa9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 DDX58O95786 925 aaKnown RBP9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 CYP19A1P11511 503 aaPredicted RBP9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 BEND3Q5T5X7 828 aa9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 POTEAQ6S8J7 498 aa9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 TTLL7Q6ZT98 887 aa9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 SMARCC1Q92922 1105 aaPredicted RBP9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 TEX13AQ9BXU3 409 aaPredicted RBP9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 ZBTB1Q9Y2K1 713 aa9.42□□□□□ -0.9
PDXDC1-215ENST00000567306 STARD3NLO95772 234 aa9.41□□□□□ -0.9
PDXDC1-215ENST00000567306 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
PDXDC1-215ENST00000567306 CENPQQ7L2Z9 268 aaPredicted RBP9.41□□□□□ -0.9
PDXDC1-215ENST00000567306 RXRBP28702 533 aa9.4□□□□□ -0.9
PDXDC1-215ENST00000567306 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
PDXDC1-215ENST00000567306 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
PDXDC1-215ENST00000567306 SKAP1Q86WV1 359 aa9.4□□□□□ -0.9
PDXDC1-215ENST00000567306 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
PDXDC1-215ENST00000567306 SRCIN1Q9C0H9 1055 aa9.4□□□□□ -0.9
PDXDC1-215ENST00000567306 CHMP4BQ9H444 224 aaKnown RBP9.4□□□□□ -0.9
PDXDC1-215ENST00000567306 KAT6BQ8WYB5 2073 aa9.4□□□□□ -0.91
PDXDC1-215ENST00000567306 IGKV5-2P06315 115 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 CRKLP46109 303 aaKnown RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 KCNQ4P56696 695 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 HDAC1Q13547 482 aaPredicted RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 FAM196AQ6ZSG2 479 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 ANKRD13DQ6ZTN6 518 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 SIRT2Q8IXJ6 389 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 PLCD3Q8N3E9 789 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 PIP4P2Q8N4L2 257 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 PLBD2Q8NHP8 589 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 MYD88Q99836 296 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 METTL22Q9BUU2 404 aaPredicted RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 BCL11BQ9C0K0 894 aaPredicted RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 USP44Q9H0E7 712 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 CCDC87Q9NVE4 849 aa9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 ZNF330Q9Y3S2 320 aaPredicted RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 AFDNP55196 1824 aaKnown RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 TNS1Q9HBL0 1735 aaKnown RBP9.39□□□□□ -0.91
PDXDC1-215ENST00000567306 IBTKQ9P2D0 1353 aaPredicted RBP9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 MYH14Q7Z406 1995 aaKnown RBP9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 NEURL1BA8MQ27 555 aa9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 CHADLQ6NUI6 762 aa9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 CEP85Q6P2H3 762 aa9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 LINS1Q8NG48 757 aa9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 SCN7AQ01118 1682 aa9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
PDXDC1-215ENST00000567306 BCORQ6W2J9 1755 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 CNTNAP4Q9C0A0 1308 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 C4BP0C0L5 1744 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 TRIM37O94972 964 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 GNAI2P04899 355 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 GNAI3P08754 354 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 NBPF7P0C2Y1 421 aaPredicted RBP9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 IL6STP40189 918 aaPredicted RBP9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 KIF6Q6ZMV9 814 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 ANKRD44Q8N8A2 993 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 RWDD1Q9H446 243 aaPredicted RBP9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 CCNL1Q9UK58 526 aaPredicted RBP9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 ANKRD36CQ5JPF3 1778 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 COL15A1P39059 1388 aa9.37□□□□□ -0.91
PDXDC1-215ENST00000567306 UTYO14607 1347 aa9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 MAP3K15Q6ZN16 1313 aa9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 EP400Q96L91 3159 aa9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 ATP5J2-PTCD1G3V325 749 aa9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 GRM8O00222 908 aa9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 UBTFL1P0CB47 393 aaPredicted RBP9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.912e-12■■□□□ 13.8
PDXDC1-215ENST00000567306 EIF5P55010 431 aaKnown RBP9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 NEXNQ0ZGT2 675 aa9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 GCKRQ14397 625 aa9.36□□□□□ -0.91
PDXDC1-215ENST00000567306 C4AP0C0L4 1744 aa9.35□□□□□ -0.91
PDXDC1-215ENST00000567306 HLFQ16534 295 aa9.35□□□□□ -0.91
PDXDC1-215ENST00000567306 SMC5Q8IY18 1101 aa9.35□□□□□ -0.91
PDXDC1-215ENST00000567306 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 AMIGO3Q86WK7 504 aa9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 DZIP3Q86Y13 1208 aaKnown RBP9.34□□□□□ -0.91
PDXDC1-215ENST00000567306 RPAP2Q8IXW5 612 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms