RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 TPTE2Q6XPS3 522 aa21.85■■□□□ 1.09
USB1-211ENST00000565662 NBPF5PQ86XG9 351 aaPredicted RBP21.85■■□□□ 1.09
USB1-211ENST00000565662 C2CD5Q86YS7 1000 aa21.85■■□□□ 1.09
USB1-211ENST00000565662 THUMPD2Q9BTF0 503 aaKnown RBP21.85■■□□□ 1.09
USB1-211ENST00000565662 ANKRD31Q8N7Z5 1873 aa21.85■■□□□ 1.09
USB1-211ENST00000565662 NBPF26B4DH59 902 aa21.84■■□□□ 1.09
USB1-211ENST00000565662 CHRNA5P30532 468 aa21.84■■□□□ 1.09
USB1-211ENST00000565662 NBPF10Q6P3W6 841 aaKnown RBP21.84■■□□□ 1.09
USB1-211ENST00000565662 NBPF15Q8N660 670 aa21.84■■□□□ 1.09
USB1-211ENST00000565662 WWC3Q9ULE0 1092 aa21.84■■□□□ 1.09
USB1-211ENST00000565662 MAP3K15Q6ZN16 1313 aa21.83■■□□□ 1.09
USB1-211ENST00000565662 CCDC146Q8IYE0 955 aa21.83■■□□□ 1.09
USB1-211ENST00000565662 CNKSR1Q969H4 720 aa21.83■■□□□ 1.09
USB1-211ENST00000565662 NIP7Q9Y221 180 aaKnown RBP eCLIP21.83■■□□□ 1.09
USB1-211ENST00000565662 ANP32CO43423 234 aa21.82■■□□□ 1.08
USB1-211ENST00000565662 NUP98P52948 1817 aa21.82■■□□□ 1.08
USB1-211ENST00000565662 RIC1Q4ADV7 1423 aa21.81■■□□□ 1.08
USB1-211ENST00000565662 CHL1O00533 1208 aa21.81■■□□□ 1.08
USB1-211ENST00000565662 NEUROD2Q15784 382 aa21.81■■□□□ 1.08
USB1-211ENST00000565662 STYK1Q6J9G0 422 aa21.81■■□□□ 1.08
USB1-211ENST00000565662 CFAP44Q96MT7 982 aa21.81■■□□□ 1.08
USB1-211ENST00000565662 MASTLQ96GX5 879 aa21.8■■□□□ 1.08
USB1-211ENST00000565662 COL11A2P13942 1736 aaPredicted RBP21.8■■□□□ 1.08
USB1-211ENST00000565662 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
USB1-211ENST00000565662 PIP4K2AP48426 406 aaPredicted RBP21.79■■□□□ 1.08
USB1-211ENST00000565662 C1QTNF8P60827 252 aa21.79■■□□□ 1.08
USB1-211ENST00000565662 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
USB1-211ENST00000565662 HSP90AB3PQ58FF7 597 aa21.79■■□□□ 1.08
USB1-211ENST00000565662 TRIM35Q9UPQ4 493 aa21.79■■□□□ 1.08
USB1-211ENST00000565662 RRP7AQ9Y3A4 280 aaKnown RBP21.79■■□□□ 1.08
USB1-211ENST00000565662 GTF2E1P29083 439 aaPredicted RBP21.78■■□□□ 1.08
USB1-211ENST00000565662 PARP10Q53GL7 1025 aa21.78■■□□□ 1.08
USB1-211ENST00000565662 SBF1O95248 1867 aa21.77■■□□□ 1.08
USB1-211ENST00000565662 GNAI1P63096 354 aa21.77■■□□□ 1.08
USB1-211ENST00000565662 ZNF622Q969S3 477 aaKnown RBP eCLIP21.77■■□□□ 1.08
USB1-211ENST00000565662 IFT57Q9NWB7 429 aa21.77■■□□□ 1.08
USB1-211ENST00000565662 KDM2BQ8NHM5 1336 aa21.77■■□□□ 1.07
USB1-211ENST00000565662 SRGNP10124 158 aa21.76■■□□□ 1.07
USB1-211ENST00000565662 MYL6BP14649 208 aa21.76■■□□□ 1.07
USB1-211ENST00000565662 NPR1P16066 1061 aa21.76■■□□□ 1.07
USB1-211ENST00000565662 LMNB1P20700 586 aa21.76■■□□□ 1.07
USB1-211ENST00000565662 GIGYF2Q6Y7W6 1299 aaKnown RBP21.76■■□□□ 1.07
USB1-211ENST00000565662 PPP1R42Q7Z4L9 355 aa21.76■■□□□ 1.07
USB1-211ENST00000565662 TNRC6CQ9HCJ0 1690 aaKnown RBP21.75■■□□□ 1.07
USB1-211ENST00000565662 ANKRD36CQ5JPF3 1778 aa21.75■■□□□ 1.07
USB1-211ENST00000565662 KLRG2A4D1S0 409 aaPredicted RBP21.75■■□□□ 1.07
USB1-211ENST00000565662 C9orf131Q5VYM1 1079 aa21.75■■□□□ 1.07
USB1-211ENST00000565662 DDX21Q9NR30 783 aaKnown RBP eCLIP21.75■■□□□ 1.07
USB1-211ENST00000565662 RNF181Q9P0P0 153 aa21.75■■□□□ 1.07
USB1-211ENST00000565662 LTBP3Q9NS15 1303 aa21.75■■□□□ 1.07
USB1-211ENST00000565662 EIF2S2P20042 333 aaKnown RBP21.74■■□□□ 1.07
USB1-211ENST00000565662 ALDH1B1P30837 517 aa21.74■■□□□ 1.07
USB1-211ENST00000565662 LAS1LQ9Y4W2 734 aaKnown RBP21.74■■□□□ 1.07
USB1-211ENST00000565662 FER1L6Q2WGJ9 1857 aa21.73■■□□□ 1.07
USB1-211ENST00000565662 APAF1O14727 1248 aa21.73■■□□□ 1.07
USB1-211ENST00000565662 CCDC27Q2M243 656 aa21.73■■□□□ 1.07
USB1-211ENST00000565662 HLFQ16534 295 aa21.72■■□□□ 1.07
USB1-211ENST00000565662 GRIPAP1Q4V328 841 aa21.72■■□□□ 1.07
USB1-211ENST00000565662 HDGFL1Q5TGJ6 251 aa21.72■■□□□ 1.07
USB1-211ENST00000565662 NGEFQ8N5V2 710 aa21.72■■□□□ 1.07
USB1-211ENST00000565662 DBF4Q9UBU7 674 aaPredicted RBP21.72■■□□□ 1.07
USB1-211ENST00000565662 CACNA1SQ13698 1873 aa21.71■■□□□ 1.07
USB1-211ENST00000565662 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
USB1-211ENST00000565662 DICER1Q9UPY3 1922 aaKnown RBP21.7■■□□□ 1.07
USB1-211ENST00000565662 PRPF40BQ6NWY9 871 aaKnown RBP21.7■■□□□ 1.06
USB1-211ENST00000565662 TTLL7Q6ZT98 887 aa21.7■■□□□ 1.06
USB1-211ENST00000565662 ZBTB3Q9H5J0 574 aa21.7■■□□□ 1.06
USB1-211ENST00000565662 HYPKQ9NX55 129 aa21.7■■□□□ 1.06
USB1-211ENST00000565662 ZNF853P0CG23 659 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 PDIA6Q15084 440 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 CCDC93Q567U6 631 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 CC2D2BQ6DHV5 1058 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 LRP10Q7Z4F1 713 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 ZNF34Q8IZ26 560 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 TAOK3Q9H2K8 898 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
USB1-211ENST00000565662 CRY2Q49AN0 593 aa21.68■■□□□ 1.06
USB1-211ENST00000565662 ZNF526Q8TF50 670 aaPredicted RBP21.68■■□□□ 1.06
USB1-211ENST00000565662 RTKN2Q8IZC4 609 aa21.67■■□□□ 1.06
USB1-211ENST00000565662 MBIPQ9NS73 344 aa21.67■■□□□ 1.06
USB1-211ENST00000565662 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
USB1-211ENST00000565662 IL16Q14005 1332 aa21.66■■□□□ 1.06
USB1-211ENST00000565662 C21orf2O43822 256 aa21.66■■□□□ 1.06
USB1-211ENST00000565662 C16orf71Q8IYS4 520 aaPredicted RBP21.66■■□□□ 1.06
USB1-211ENST00000565662 RPGRQ92834 1020 aaKnown RBP21.66■■□□□ 1.06
USB1-211ENST00000565662 CCDC88AQ3V6T2 1871 aa21.66■■□□□ 1.06
USB1-211ENST00000565662 UBN2Q6ZU65 1347 aa21.65■■□□□ 1.06
USB1-211ENST00000565662 TOMM70O94826 608 aa21.65■■□□□ 1.06
USB1-211ENST00000565662 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
USB1-211ENST00000565662 DUSP27Q5VZP5 1158 aa21.65■■□□□ 1.06
USB1-211ENST00000565662 DPY19L2Q6NUT2 758 aa21.65■■□□□ 1.06
USB1-211ENST00000565662 COPS6Q7L5N1 327 aa21.65■■□□□ 1.06
USB1-211ENST00000565662 UTP14AQ9BVJ6 771 aaKnown RBP21.65■■□□□ 1.06
USB1-211ENST00000565662 TMX4Q9H1E5 349 aaPredicted RBP21.65■■□□□ 1.06
USB1-211ENST00000565662 NFKBIEO00221 500 aa21.64■■□□□ 1.05
USB1-211ENST00000565662 NTSR2O95665 410 aa21.64■■□□□ 1.05
USB1-211ENST00000565662 RASSF7Q02833 373 aa21.64■■□□□ 1.05
USB1-211ENST00000565662 CCDC24Q8N4L8 307 aa21.64■■□□□ 1.05
USB1-211ENST00000565662 PLBD2Q8NHP8 589 aa21.64■■□□□ 1.05
USB1-211ENST00000565662 XAGE3Q8WTP9 111 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms