RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TMEM87AQ8NBN3 555 aa24.43■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TYRO3Q06418 890 aa24.43■■□□□ 1.5
MAP1LC3B-206ENST00000564844 ARID5BQ14865 1188 aa24.43■■□□□ 1.5
MAP1LC3B-206ENST00000564844 CNTROBQ8N137 903 aa24.43■■□□□ 1.5
MAP1LC3B-206ENST00000564844 ACEP12821 1306 aa24.43■■□□□ 1.5
MAP1LC3B-206ENST00000564844 METP08581 1390 aa24.43■■□□□ 1.5
MAP1LC3B-206ENST00000564844 MLH3Q9UHC1 1453 aa24.42■■□□□ 1.5
MAP1LC3B-206ENST00000564844 DDX11Q96FC9 970 aa24.42■■□□□ 1.5
MAP1LC3B-206ENST00000564844 NUP62CLQ9H1M0 184 aa24.42■■□□□ 1.5
MAP1LC3B-206ENST00000564844 PA2G4Q9UQ80 394 aaKnown RBP24.42■■□□□ 1.5
MAP1LC3B-206ENST00000564844 CRB1P82279 1406 aa24.42■■□□□ 1.5
MAP1LC3B-206ENST00000564844 GOLGA6L6A8MZA4 724 aa24.42■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TTC21BQ7Z4L5 1316 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TNNT1P13805 278 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 ST3GAL1Q11201 340 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 MAP3K11Q16584 847 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TNMDQ9H2S6 317 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 MRVI1Q9Y6F6 885 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 AATKQ6ZMQ8 1374 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 HDGFL1Q5TGJ6 251 aa24.41■■□□□ 1.5
MAP1LC3B-206ENST00000564844 NCBP1Q09161 790 aaKnown RBP24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 EYA1Q99502 592 aa24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 DNAJC25Q9H1X3 360 aa24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 CBX8Q9HC52 389 aa24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TAF7Q15545 349 aaPredicted RBP24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 UTP14CQ5TAP6 766 aaKnown RBP24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 SYTL4Q96C24 671 aaPredicted RBP24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TPCN1Q9ULQ1 816 aa24.4■■□□□ 1.5
MAP1LC3B-206ENST00000564844 ATP7BP35670 1465 aa24.39■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TPD52L1Q16890 204 aaPredicted RBP24.39■■□□□ 1.5
MAP1LC3B-206ENST00000564844 TAF6LQ9Y6J9 622 aa24.39■■□□□ 1.5
MAP1LC3B-206ENST00000564844 FAM200AQ8TCP9 573 aa24.39■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CGNQ9P2M7 1197 aaKnown RBP24.39■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CYP46A1Q9Y6A2 500 aa24.39■■□□□ 1.49
MAP1LC3B-206ENST00000564844 ZBTB22O15209 634 aa24.38■■□□□ 1.49
MAP1LC3B-206ENST00000564844 FAM227BQ96M60 508 aa24.38■■□□□ 1.49
MAP1LC3B-206ENST00000564844 TRMT1Q9NXH9 659 aaKnown RBP24.38■■□□□ 1.49
MAP1LC3B-206ENST00000564844 RAB11FIP3O75154 756 aa24.38■■□□□ 1.49
MAP1LC3B-206ENST00000564844 NGDNQ8NEJ9 315 aaKnown RBP24.37■■□□□ 1.49
MAP1LC3B-206ENST00000564844 BICD2Q8TD16 824 aa24.37■■□□□ 1.49
MAP1LC3B-206ENST00000564844 ERCC4Q92889 916 aaPredicted RBP24.37■■□□□ 1.49
MAP1LC3B-206ENST00000564844 MAPK8IP2Q13387 824 aaPredicted RBP24.36■■□□□ 1.49
MAP1LC3B-206ENST00000564844 KRT85P78386 507 aa24.36■■□□□ 1.49
MAP1LC3B-206ENST00000564844 SSH3Q8TE77 659 aa24.36■■□□□ 1.49
MAP1LC3B-206ENST00000564844 PI4KAP2A4QPH2 592 aa24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CCDC144BQ3MJ40 725 aa24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CCDC144CPQ8IYA2 1237 aa24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 PI4KAP1Q8N8J0 262 aa24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 TAOK2Q9UL54 1235 aa24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 NR1I2O75469 434 aa24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CACTINQ8WUQ7 758 aaKnown RBP24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 SPATA32Q96LK8 384 aa24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 GTPBP4Q9BZE4 634 aaKnown RBP24.35■■□□□ 1.49
MAP1LC3B-206ENST00000564844 LARP1Q6PKG0 1096 aaKnown RBP24.34■■□□□ 1.49
MAP1LC3B-206ENST00000564844 KIF1BPQ96EK5 621 aa24.34■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CCDC9Q9Y3X0 531 aaKnown RBP24.34■■□□□ 1.49
MAP1LC3B-206ENST00000564844 USP27XA6NNY8 438 aa24.34■■□□□ 1.49
MAP1LC3B-206ENST00000564844 FILIP1Q7Z7B0 1213 aa24.34■■□□□ 1.49
MAP1LC3B-206ENST00000564844 IL17REQ8NFR9 667 aa24.34■■□□□ 1.49
MAP1LC3B-206ENST00000564844 ANKRD7Q92527 254 aa24.34■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CCDC8Q9H0W5 538 aaPredicted RBP24.33■■□□□ 1.49
MAP1LC3B-206ENST00000564844 ZSCAN25Q6NSZ9 544 aa24.33■■□□□ 1.49
MAP1LC3B-206ENST00000564844 CLIP2Q9UDT6 1046 aa24.33■■□□□ 1.49
MAP1LC3B-206ENST00000564844 SSH2Q76I76 1423 aa24.33■■□□□ 1.49
MAP1LC3B-206ENST00000564844 ZNF165P49910 485 aa24.33■■□□□ 1.48
MAP1LC3B-206ENST00000564844 RBM8AQ9Y5S9 174 aaKnown RBP24.33■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CCDC112Q8NEF3 446 aa24.32■■□□□ 1.48
MAP1LC3B-206ENST00000564844 SIL1Q9H173 461 aa24.32■■□□□ 1.48
MAP1LC3B-206ENST00000564844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 TMEM131LA2VDJ0 1609 aa24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 TSPOAP1O95153 1857 aa24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 KCNQ3O43525 872 aa24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 ZKSCAN1P17029 563 aaPredicted RBP24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CHPF2Q9P2E5 772 aa24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 NDUFB9Q9Y6M9 179 aa24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 RIMS1Q86UR5 1692 aaKnown RBP24.31■■□□□ 1.48
MAP1LC3B-206ENST00000564844 GNAT3A8MTJ3 354 aa24.3■■□□□ 1.48
MAP1LC3B-206ENST00000564844 JAK2O60674 1132 aa24.3■■□□□ 1.48
MAP1LC3B-206ENST00000564844 LRRC2Q9BYS8 371 aa24.3■■□□□ 1.48
MAP1LC3B-206ENST00000564844 EDC3Q96F86 508 aaKnown RBP24.3■■□□□ 1.48
MAP1LC3B-206ENST00000564844 ERICH4A6NGS2 130 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 IFIT2P09913 472 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 ZNF75DP51815 510 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 NLRP6P59044 892 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 BOLA2Q9H3K6 86 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CTIFO43310 598 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 AACSQ86V21 672 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CLASRPQ8N2M8 674 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 FTOQ9C0B1 505 aaKnown RBP eCLIP24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 USP16Q9Y5T5 823 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CLTCQ00610 1675 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 VPS53Q5VIR6 699 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CREB3L3Q68CJ9 461 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 ST7Q9NRC1 585 aa24.29■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CHGBP05060 677 aa24.28■■□□□ 1.48
MAP1LC3B-206ENST00000564844 NMIQ13287 307 aaPredicted RBP24.27■■□□□ 1.48
MAP1LC3B-206ENST00000564844 ZSWIM6Q9HCJ5 1215 aa24.27■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CTNNA3Q9UI47 895 aa24.27■■□□□ 1.48
MAP1LC3B-206ENST00000564844 CEBPAP49715 358 aaPredicted RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms