RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 TTLL7Q6ZT98 887 aa24.81■■□□□ 1.56
TRADD-203ENST00000563348 C2CD5Q86YS7 1000 aa24.81■■□□□ 1.56
TRADD-203ENST00000563348 CNBD1Q8NA66 436 aa24.81■■□□□ 1.56
TRADD-203ENST00000563348 NIP7Q9Y221 180 aaKnown RBP eCLIP24.81■■□□□ 1.56
TRADD-203ENST00000563348 H0YIN7 160 aa24.8■■□□□ 1.56
TRADD-203ENST00000563348 PDE6BP35913 854 aa24.8■■□□□ 1.56
TRADD-203ENST00000563348 CALD1Q05682 793 aaKnown RBP24.8■■□□□ 1.56
TRADD-203ENST00000563348 KRT24Q2M2I5 525 aa24.8■■□□□ 1.56
TRADD-203ENST00000563348 ARHGAP27Q6ZUM4 889 aa24.8■■□□□ 1.56
TRADD-203ENST00000563348 CCDC24Q8N4L8 307 aa24.8■■□□□ 1.56
TRADD-203ENST00000563348 PDZRN3Q9UPQ7 1066 aa24.8■■□□□ 1.56
TRADD-203ENST00000563348 MAP3K15Q6ZN16 1313 aa24.8■■□□□ 1.56
TRADD-203ENST00000563348 KIF6Q6ZMV9 814 aa24.79■■□□□ 1.56
TRADD-203ENST00000563348 LRP10Q7Z4F1 713 aa24.79■■□□□ 1.56
TRADD-203ENST00000563348 NPHP1O15259 732 aa24.78■■□□□ 1.56
TRADD-203ENST00000563348 NBPF5PQ86XG9 351 aaPredicted RBP24.78■■□□□ 1.56
TRADD-203ENST00000563348 IFT57Q9NWB7 429 aa24.78■■□□□ 1.56
TRADD-203ENST00000563348 BCORQ6W2J9 1755 aa24.77■■□□□ 1.56
TRADD-203ENST00000563348 ST5P78524 1137 aa24.77■■□□□ 1.56
TRADD-203ENST00000563348 TPTE2Q6XPS3 522 aa24.77■■□□□ 1.56
TRADD-203ENST00000563348 MBIPQ9NS73 344 aa24.77■■□□□ 1.56
TRADD-203ENST00000563348 BRCA1P38398 1863 aaKnown RBP24.77■■□□□ 1.56
TRADD-203ENST00000563348 HOXB7P09629 217 aa24.76■■□□□ 1.55
TRADD-203ENST00000563348 GNAI1P63096 354 aa24.76■■□□□ 1.55
TRADD-203ENST00000563348 PROSER3Q2NL68 480 aa24.76■■□□□ 1.55
TRADD-203ENST00000563348 TTLL6Q8N841 843 aa24.76■■□□□ 1.55
TRADD-203ENST00000563348 NECTIN2Q92692 538 aa24.76■■□□□ 1.55
TRADD-203ENST00000563348 ANXA1P04083 346 aa24.75■■□□□ 1.55
TRADD-203ENST00000563348 ZBTB3Q9H5J0 574 aa24.75■■□□□ 1.55
TRADD-203ENST00000563348 CCDC27Q2M243 656 aa24.74■■□□□ 1.55
TRADD-203ENST00000563348 DDX21Q9NR30 783 aaKnown RBP eCLIP24.74■■□□□ 1.55
TRADD-203ENST00000563348 NCBP3Q53F19 620 aaKnown RBP24.73■■□□□ 1.55
TRADD-203ENST00000563348 DUSP27Q5VZP5 1158 aa24.73■■□□□ 1.55
TRADD-203ENST00000563348 GIGYF2Q6Y7W6 1299 aaKnown RBP24.73■■□□□ 1.55
TRADD-203ENST00000563348 ZNF622Q969S3 477 aaKnown RBP eCLIP24.73■■□□□ 1.55
TRADD-203ENST00000563348 ADCY9O60503 1353 aa24.71■■□□□ 1.55
TRADD-203ENST00000563348 FAM177BA6PVY3 158 aa24.71■■□□□ 1.55
TRADD-203ENST00000563348 HDGFL1Q5TGJ6 251 aa24.71■■□□□ 1.55
TRADD-203ENST00000563348 COPS6Q7L5N1 327 aa24.71■■□□□ 1.55
TRADD-203ENST00000563348 ZNF34Q8IZ26 560 aa24.71■■□□□ 1.55
TRADD-203ENST00000563348 ATP10DQ9P241 1426 aa24.7■■□□□ 1.55
TRADD-203ENST00000563348 KLRG2A4D1S0 409 aaPredicted RBP24.7■■□□□ 1.54
TRADD-203ENST00000563348 SRGNP10124 158 aa24.7■■□□□ 1.54
TRADD-203ENST00000563348 WWC1Q8IX03 1113 aa24.7■■□□□ 1.54
TRADD-203ENST00000563348 XAGE3Q8WTP9 111 aa24.7■■□□□ 1.54
TRADD-203ENST00000563348 ARFGEF1Q9Y6D6 1849 aa24.7■■□□□ 1.54
TRADD-203ENST00000563348 SENP3-EIF4A1A0A087X0R7 540 aa24.69■■□□□ 1.54
TRADD-203ENST00000563348 GPTP24298 496 aa24.69■■□□□ 1.54
TRADD-203ENST00000563348 GTF2E1P29083 439 aaPredicted RBP24.69■■□□□ 1.54
TRADD-203ENST00000563348 STYK1Q6J9G0 422 aa24.69■■□□□ 1.54
TRADD-203ENST00000563348 NYXQ9GZU5 481 aa24.69■■□□□ 1.54
TRADD-203ENST00000563348 CHPF2Q9P2E5 772 aa24.69■■□□□ 1.54
TRADD-203ENST00000563348 ANKRD31Q8N7Z5 1873 aa24.68■■□□□ 1.54
TRADD-203ENST00000563348 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
TRADD-203ENST00000563348 CNKSR1Q969H4 720 aa24.68■■□□□ 1.54
TRADD-203ENST00000563348 MASTLQ96GX5 879 aa24.68■■□□□ 1.54
TRADD-203ENST00000563348 DBF4Q9UBU7 674 aaPredicted RBP24.68■■□□□ 1.54
TRADD-203ENST00000563348 UBN2Q6ZU65 1347 aa24.66■■□□□ 1.54
TRADD-203ENST00000563348 PARP10Q53GL7 1025 aa24.66■■□□□ 1.54
TRADD-203ENST00000563348 SUSD4Q5VX71 490 aa24.66■■□□□ 1.54
TRADD-203ENST00000563348 C9orf131Q5VYM1 1079 aa24.66■■□□□ 1.54
TRADD-203ENST00000563348 NUP98P52948 1817 aa24.65■■□□□ 1.54
TRADD-203ENST00000563348 ELL2O00472 640 aaPredicted RBP24.65■■□□□ 1.54
TRADD-203ENST00000563348 NUTM1Q86Y26 1132 aa24.65■■□□□ 1.54
TRADD-203ENST00000563348 C8orf58Q8NAV2 365 aa24.65■■□□□ 1.54
TRADD-203ENST00000563348 HYPKQ9NX55 129 aa24.65■■□□□ 1.54
TRADD-203ENST00000563348 NPR1P16066 1061 aa24.64■■□□□ 1.54
TRADD-203ENST00000563348 HSP90AB3PQ58FF7 597 aa24.64■■□□□ 1.54
TRADD-203ENST00000563348 FAM9BQ8IZU0 186 aa24.64■■□□□ 1.54
TRADD-203ENST00000563348 DLEC1Q9Y238 1755 aa24.64■■□□□ 1.53
TRADD-203ENST00000563348 IBTKQ9P2D0 1353 aaPredicted RBP24.64■■□□□ 1.53
TRADD-203ENST00000563348 IL16Q14005 1332 aa24.63■■□□□ 1.53
TRADD-203ENST00000563348 ERFEQ4G0M1 354 aa24.63■■□□□ 1.53
TRADD-203ENST00000563348 PPP1R42Q7Z4L9 355 aa24.63■■□□□ 1.53
TRADD-203ENST00000563348 GPBP1L1Q9HC44 474 aaPredicted RBP24.63■■□□□ 1.53
TRADD-203ENST00000563348 C21orf2O43822 256 aa24.62■■□□□ 1.53
TRADD-203ENST00000563348 TCIRG1Q13488 830 aa24.62■■□□□ 1.53
TRADD-203ENST00000563348 CHMP4AQ9BY43 222 aa24.62■■□□□ 1.53
TRADD-203ENST00000563348 NTSR2O95665 410 aa24.61■■□□□ 1.53
TRADD-203ENST00000563348 PRPF40BQ6NWY9 871 aaKnown RBP24.61■■□□□ 1.53
TRADD-203ENST00000563348 ANKRD13DQ6ZTN6 518 aa24.61■■□□□ 1.53
TRADD-203ENST00000563348 PLBD2Q8NHP8 589 aa24.61■■□□□ 1.53
TRADD-203ENST00000563348 TSR2Q969E8 191 aaKnown RBP24.61■■□□□ 1.53
TRADD-203ENST00000563348 ZNF219Q9P2Y4 722 aaPredicted RBP24.61■■□□□ 1.53
TRADD-203ENST00000563348 ABCC12Q96J65 1359 aa24.6■■□□□ 1.53
TRADD-203ENST00000563348 RASSF7Q02833 373 aa24.6■■□□□ 1.53
TRADD-203ENST00000563348 CRY2Q49AN0 593 aa24.6■■□□□ 1.53
TRADD-203ENST00000563348 WDR63Q8IWG1 891 aa24.6■■□□□ 1.53
TRADD-203ENST00000563348 ZNF526Q8TF50 670 aaPredicted RBP24.6■■□□□ 1.53
TRADD-203ENST00000563348 UTP14AQ9BVJ6 771 aaKnown RBP24.6■■□□□ 1.53
TRADD-203ENST00000563348 RNF181Q9P0P0 153 aa24.6■■□□□ 1.53
TRADD-203ENST00000563348 SALL2Q9Y467 1007 aaPredicted RBP24.6■■□□□ 1.53
TRADD-203ENST00000563348 NFKBIEO00221 500 aa24.59■■□□□ 1.53
TRADD-203ENST00000563348 NLRP10Q86W26 655 aa24.59■■□□□ 1.53
TRADD-203ENST00000563348 TSPYL6Q8N831 410 aa24.59■■□□□ 1.53
TRADD-203ENST00000563348 C7orf43Q8WVR3 580 aa24.59■■□□□ 1.53
TRADD-203ENST00000563348 COL11A2P13942 1736 aaPredicted RBP24.58■■□□□ 1.53
TRADD-203ENST00000563348 LMNB1P20700 586 aa24.58■■□□□ 1.53
TRADD-203ENST00000563348 ALDH1B1P30837 517 aa24.58■■□□□ 1.53
TRADD-203ENST00000563348 SLC10A5Q5PT55 438 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 1104.1 ms