RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 RIOK3O14730 519 aaKnown RBP22.26■■□□□ 1.15
BBS4-204ENST00000562084 SGSM2O43147 1006 aa22.26■■□□□ 1.15
BBS4-204ENST00000562084 ATP2B3Q16720 1220 aa22.26■■□□□ 1.15
BBS4-204ENST00000562084 FOXD4L6Q3SYB3 417 aaPredicted RBP22.26■■□□□ 1.15
BBS4-204ENST00000562084 FOXD4L3Q6VB84 417 aaPredicted RBP22.26■■□□□ 1.15
BBS4-204ENST00000562084 KCNF1Q9H3M0 494 aa22.26■■□□□ 1.15
BBS4-204ENST00000562084 SH2B1Q9NRF2 756 aaPredicted RBP22.26■■□□□ 1.15
BBS4-204ENST00000562084 ZRANB1Q9UGI0 708 aa22.26■■□□□ 1.15
BBS4-204ENST00000562084 SNX14Q9Y5W7 946 aa22.26■■□□□ 1.15
BBS4-204ENST00000562084 TSHZ3Q63HK5 1081 aa22.25■■□□□ 1.15
BBS4-204ENST00000562084 TSC1Q92574 1164 aa22.25■■□□□ 1.15
BBS4-204ENST00000562084 PODXL2Q9NZ53 605 aa22.25■■□□□ 1.15
BBS4-204ENST00000562084 NHSL1Q5SYE7 1610 aa22.25■■□□□ 1.15
BBS4-204ENST00000562084 FAM208AQ9UK61 1670 aaKnown RBP22.25■■□□□ 1.15
BBS4-204ENST00000562084 G2E3Q7L622 706 aa22.24■■□□□ 1.15
BBS4-204ENST00000562084 C17orf53Q8N3J3 647 aaPredicted RBP22.24■■□□□ 1.15
BBS4-204ENST00000562084 FAM200AQ8TCP9 573 aa22.24■■□□□ 1.15
BBS4-204ENST00000562084 TSPYL4Q9UJ04 414 aa22.24■■□□□ 1.15
BBS4-204ENST00000562084 CCDC171Q6TFL3 1326 aa22.24■■□□□ 1.15
BBS4-204ENST00000562084 F6X3S4 739 aa22.24■■□□□ 1.15
BBS4-204ENST00000562084 AK2P54819 239 aa22.24■■□□□ 1.15
BBS4-204ENST00000562084 FIBPO43427 364 aa22.23■■□□□ 1.15
BBS4-204ENST00000562084 PSME1Q06323 249 aa22.23■■□□□ 1.15
BBS4-204ENST00000562084 CCDC30Q5VVM6 783 aa22.23■■□□□ 1.15
BBS4-204ENST00000562084 OGFRQ9NZT2 677 aa22.23■■□□□ 1.15
BBS4-204ENST00000562084 PYCARDQ9ULZ3 195 aa22.23■■□□□ 1.15
BBS4-204ENST00000562084 PNMA6EA0A0J9YXQ4 647 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 GIMAP6Q6P9H5 292 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.22■■□□□ 1.15
BBS4-204ENST00000562084 CNTROBQ8N137 903 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 LSG1Q9H089 658 aaKnown RBP22.22■■□□□ 1.15
BBS4-204ENST00000562084 ELP1O95163 1332 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 NPHP3Q7Z494 1330 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 CRYBG1Q9Y4K1 1723 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 SMTNL1A8MU46 457 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 HTATSF1O43719 755 aaKnown RBP22.22■■□□□ 1.15
BBS4-204ENST00000562084 RUFY3Q7L099 469 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 UNC5CLQ8IV45 518 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 MPNDQ8N594 471 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 SSH3Q8TE77 659 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 JARID2Q92833 1246 aaPredicted RBP22.22■■□□□ 1.15
BBS4-204ENST00000562084 TM6SF1Q9BZW5 370 aa22.22■■□□□ 1.15
BBS4-204ENST00000562084 FLIIQ13045 1269 aa22.21■■□□□ 1.15
BBS4-204ENST00000562084 VPS53Q5VIR6 699 aa22.21■■□□□ 1.15
BBS4-204ENST00000562084 KRT28Q7Z3Y7 464 aa22.21■■□□□ 1.15
BBS4-204ENST00000562084 OVOS2A0A0J9YW53 1432 aa22.21■■□□□ 1.15
BBS4-204ENST00000562084 OVOS2Q6IE36 1432 aa22.21■■□□□ 1.15
BBS4-204ENST00000562084 AHDC1Q5TGY3 1603 aaPredicted RBP22.21■■□□□ 1.15
BBS4-204ENST00000562084 MTMR6Q9Y217 621 aa22.2■■□□□ 1.14
BBS4-204ENST00000562084 PAXBP1Q9Y5B6 917 aa22.2■■□□□ 1.14
BBS4-204ENST00000562084 LRRC37A3O60309 1634 aa22.2■■□□□ 1.14
BBS4-204ENST00000562084 GABPB1Q06547 395 aaPredicted RBP22.2■■□□□ 1.14
BBS4-204ENST00000562084 PXDNQ92626 1479 aa22.2■■□□□ 1.14
BBS4-204ENST00000562084 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
BBS4-204ENST00000562084 USP6P35125 1406 aa22.19■■□□□ 1.14
BBS4-204ENST00000562084 AP5Z1O43299 807 aa22.19■■□□□ 1.14
BBS4-204ENST00000562084 PLCB2Q00722 1185 aa22.19■■□□□ 1.14
BBS4-204ENST00000562084 MAP3K11Q16584 847 aa22.19■■□□□ 1.14
BBS4-204ENST00000562084 RUFY2Q8WXA3 655 aa22.19■■□□□ 1.14
BBS4-204ENST00000562084 CGNQ9P2M7 1197 aaKnown RBP22.19■■□□□ 1.14
BBS4-204ENST00000562084 MAP3K5Q99683 1374 aa22.18■■□□□ 1.14
BBS4-204ENST00000562084 SOS2Q07890 1332 aaPredicted RBP22.18■■□□□ 1.14
BBS4-204ENST00000562084 USP42Q9H9J4 1324 aaKnown RBP22.18■■□□□ 1.14
BBS4-204ENST00000562084 PI4K2BQ8TCG2 481 aa22.18■■□□□ 1.14
BBS4-204ENST00000562084 BABAM1Q9NWV8 329 aa22.18■■□□□ 1.14
BBS4-204ENST00000562084 TRPM3Q9HCF6 1732 aaPredicted RBP22.18■■□□□ 1.14
BBS4-204ENST00000562084 ZBTB7CA1YPR0 619 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 KCNB2Q92953 911 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 HYPKQ9NX55 129 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 LRRFIP2Q9Y608 721 aaKnown RBP22.17■■□□□ 1.14
BBS4-204ENST00000562084 USP31Q70CQ4 1352 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 CAVIN2O95810 425 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 UBTFL1P0CB47 393 aaPredicted RBP22.17■■□□□ 1.14
BBS4-204ENST00000562084 GJB2P29033 226 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 KRT85P78386 507 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 DNM1Q05193 864 aaKnown RBP22.17■■□□□ 1.14
BBS4-204ENST00000562084 FBXO41Q8TF61 875 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 NUP62CLQ9H1M0 184 aa22.17■■□□□ 1.14
BBS4-204ENST00000562084 POLA2Q14181 598 aa22.16■■□□□ 1.14
BBS4-204ENST00000562084 HSP90AB4PQ58FF6 505 aa22.16■■□□□ 1.14
BBS4-204ENST00000562084 KIF1BPQ96EK5 621 aa22.16■■□□□ 1.14
BBS4-204ENST00000562084 IL25Q9H293 177 aa22.16■■□□□ 1.14
BBS4-204ENST00000562084 PEAK1Q9H792 1746 aa22.16■■□□□ 1.14
BBS4-204ENST00000562084 PDCP20941 246 aa22.15■■□□□ 1.14
BBS4-204ENST00000562084 KDRP35968 1356 aa22.15■■□□□ 1.14
BBS4-204ENST00000562084 TTC41PQ6P2S7 1318 aa22.15■■□□□ 1.14
BBS4-204ENST00000562084 COL16A1Q07092 1604 aaPredicted RBP22.14■■□□□ 1.14
BBS4-204ENST00000562084 U2AF2P26368 475 aaKnown RBP eCLIP22.14■■□□□ 1.133e-6■■■■□ 23.8
BBS4-204ENST00000562084 TYRO3Q06418 890 aa22.14■■□□□ 1.13
BBS4-204ENST00000562084 NCBP1Q09161 790 aaKnown RBP22.14■■□□□ 1.13
BBS4-204ENST00000562084 SPC24Q8NBT2 197 aa22.14■■□□□ 1.13
BBS4-204ENST00000562084 ZSWIM6Q9HCJ5 1215 aa22.14■■□□□ 1.13
BBS4-204ENST00000562084 PDRG1Q9NUG6 133 aa22.14■■□□□ 1.13
BBS4-204ENST00000562084 DDX19AQ9NUU7 478 aaKnown RBP22.14■■□□□ 1.13
BBS4-204ENST00000562084 RASEFQ8IZ41 740 aa22.13■■□□□ 1.13
BBS4-204ENST00000562084 RHPN1Q8TCX5 695 aa22.13■■□□□ 1.13
BBS4-204ENST00000562084 CYP46A1Q9Y6A2 500 aa22.13■■□□□ 1.13
BBS4-204ENST00000562084 CASTP20810 708 aaKnown RBP22.13■■□□□ 1.13
BBS4-204ENST00000562084 PTGS1P23219 599 aa22.13■■□□□ 1.13
BBS4-204ENST00000562084 CDC25BP30305 580 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms