RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 TNRC6CQ9HCJ0 1690 aaKnown RBP10.97□□□□□ -0.65
MARK3-225ENST00000561225 ARFGEF1Q9Y6D6 1849 aa10.96□□□□□ -0.65
MARK3-225ENST00000561225 NCAPD2Q15021 1401 aa10.96□□□□□ -0.65
MARK3-225ENST00000561225 KDRP35968 1356 aa10.96□□□□□ -0.65
MARK3-225ENST00000561225 NEUROD1Q13562 356 aa10.96□□□□□ -0.65
MARK3-225ENST00000561225 DALRD3Q5D0E6 543 aaKnown RBP10.96□□□□□ -0.65
MARK3-225ENST00000561225 ATG3Q9NT62 314 aa10.96□□□□□ -0.65
MARK3-225ENST00000561225 PARP3Q9Y6F1 533 aa10.96□□□□□ -0.65
MARK3-225ENST00000561225 KIF24Q5T7B8 1368 aa10.95□□□□□ -0.66
MARK3-225ENST00000561225 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
MARK3-225ENST00000561225 SLC4A9Q96Q91 983 aa10.95□□□□□ -0.66
MARK3-225ENST00000561225 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
MARK3-225ENST00000561225 RFC4P35249 363 aa10.94□□□□□ -0.66
MARK3-225ENST00000561225 ARSIQ5FYB1 569 aa10.94□□□□□ -0.66
MARK3-225ENST00000561225 TESK2Q96S53 571 aa10.94□□□□□ -0.66
MARK3-225ENST00000561225 ZC3H4Q9UPT8 1303 aaKnown RBP10.93□□□□□ -0.66
MARK3-225ENST00000561225 PHKG2P15735 406 aa10.93□□□□□ -0.66
MARK3-225ENST00000561225 RC3H1Q5TC82 1133 aaKnown RBP10.93□□□□□ -0.66
MARK3-225ENST00000561225 KDM6AO15550 1401 aaPredicted RBP10.92□□□□□ -0.66
MARK3-225ENST00000561225 CNTNAP4Q9C0A0 1308 aa10.92□□□□□ -0.66
MARK3-225ENST00000561225 GLTPD2A6NH11 291 aa10.92□□□□□ -0.66
MARK3-225ENST00000561225 RPS6KA4O75676 772 aa10.92□□□□□ -0.66
MARK3-225ENST00000561225 VEGFAP15692 232 aaPredicted RBP10.92□□□□□ -0.66
MARK3-225ENST00000561225 CHRNA5P30532 468 aa10.92□□□□□ -0.66
MARK3-225ENST00000561225 LSM11P83369 360 aaKnown RBP eCLIP10.92□□□□□ -0.665e-18■■■■■ 28.9
MARK3-225ENST00000561225 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
MARK3-225ENST00000561225 TMC2Q8TDI7 906 aa10.92□□□□□ -0.66
MARK3-225ENST00000561225 EMILIN1Q9Y6C2 1016 aa10.92□□□□□ -0.66
MARK3-225ENST00000561225 TONSLQ96HA7 1378 aa10.91□□□□□ -0.66
MARK3-225ENST00000561225 ZNF316A6NFI3 1004 aaPredicted RBP10.91□□□□□ -0.66
MARK3-225ENST00000561225 RASSF7Q02833 373 aa10.91□□□□□ -0.66
MARK3-225ENST00000561225 DDR1Q08345 913 aa10.91□□□□□ -0.66
MARK3-225ENST00000561225 SBF1O95248 1867 aa10.9□□□□□ -0.66
MARK3-225ENST00000561225 ZNF831Q5JPB2 1677 aa10.9□□□□□ -0.66
MARK3-225ENST00000561225 ST20-MTHFSA0A0A6YYL1 179 aa10.9□□□□□ -0.66
MARK3-225ENST00000561225 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
MARK3-225ENST00000561225 SRP68Q9UHB9 627 aaKnown RBP10.9□□□□□ -0.66
MARK3-225ENST00000561225 COL5A3P25940 1745 aaPredicted RBP10.89□□□□□ -0.67
MARK3-225ENST00000561225 POTECB2RU33 542 aa10.89□□□□□ -0.67
MARK3-225ENST00000561225 LMNB1P20700 586 aa10.89□□□□□ -0.67
MARK3-225ENST00000561225 EYA1Q99502 592 aa10.89□□□□□ -0.67
MARK3-225ENST00000561225 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
MARK3-225ENST00000561225 POLRMTO00411 1230 aaKnown RBP10.88□□□□□ -0.67
MARK3-225ENST00000561225 FOXN1O15353 648 aa10.88□□□□□ -0.67
MARK3-225ENST00000561225 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
MARK3-225ENST00000561225 PPM1GO15355 546 aaPredicted RBP10.87□□□□□ -0.67
MARK3-225ENST00000561225 PRDM10Q9NQV6 1147 aa10.87□□□□□ -0.67
MARK3-225ENST00000561225 MKRN1Q9UHC7 482 aaKnown RBP10.87□□□□□ -0.67
MARK3-225ENST00000561225 MYH14Q7Z406 1995 aaKnown RBP10.86□□□□□ -0.67
MARK3-225ENST00000561225 WASHC2AQ641Q2 1341 aa10.86□□□□□ -0.67
MARK3-225ENST00000561225 SLC24A1O60721 1099 aa10.86□□□□□ -0.67
MARK3-225ENST00000561225 TM4SF1P30408 202 aa10.86□□□□□ -0.67
MARK3-225ENST00000561225 CRKLP46109 303 aaKnown RBP10.86□□□□□ -0.67
MARK3-225ENST00000561225 KHSRPQ92945 711 aaKnown RBP eCLIP10.86□□□□□ -0.677e-11■□□□□ 11.1
MARK3-225ENST00000561225 NFKBIEO00221 500 aa10.85□□□□□ -0.67
MARK3-225ENST00000561225 KIF20BQ96Q89 1820 aa10.85□□□□□ -0.67
MARK3-225ENST00000561225 ANKRD26Q9UPS8 1709 aa10.84□□□□□ -0.67
MARK3-225ENST00000561225 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
MARK3-225ENST00000561225 CNTNAP1P78357 1384 aa10.84□□□□□ -0.67
MARK3-225ENST00000561225 TIAM2Q8IVF5 1701 aa10.84□□□□□ -0.67
MARK3-225ENST00000561225 PPP1R37O75864 691 aa10.83□□□□□ -0.68
MARK3-225ENST00000561225 HSP90AB1P08238 724 aaKnown RBP10.83□□□□□ -0.68
MARK3-225ENST00000561225 CTCFP49711 727 aaPredicted RBP10.83□□□□□ -0.68
MARK3-225ENST00000561225 CABP4P57796 275 aa10.83□□□□□ -0.68
MARK3-225ENST00000561225 FAM161AQ3B820 660 aa10.83□□□□□ -0.68
MARK3-225ENST00000561225 TTLL6Q8N841 843 aa10.83□□□□□ -0.68
MARK3-225ENST00000561225 CARD14Q9BXL6 1004 aa10.83□□□□□ -0.68
MARK3-225ENST00000561225 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
MARK3-225ENST00000561225 ADAMTS7Q9UKP4 1686 aa10.82□□□□□ -0.68
MARK3-225ENST00000561225 EIF4A2Q14240 407 aaKnown RBP10.82□□□□□ -0.68
MARK3-225ENST00000561225 USPL1Q5W0Q7 1092 aa10.82□□□□□ -0.68
MARK3-225ENST00000561225 INTS5Q6P9B9 1019 aaKnown RBP10.82□□□□□ -0.68
MARK3-225ENST00000561225 POLKQ9UBT6 870 aa10.82□□□□□ -0.68
MARK3-225ENST00000561225 C2orf72A6NCS6 295 aa10.81□□□□□ -0.68
MARK3-225ENST00000561225 ZPR1O75312 459 aa10.81□□□□□ -0.68
MARK3-225ENST00000561225 PBX2P40425 430 aa10.81□□□□□ -0.68
MARK3-225ENST00000561225 NFIXQ14938 502 aa10.81□□□□□ -0.68
MARK3-225ENST00000561225 AIDAQ96BJ3 306 aa10.81□□□□□ -0.68
MARK3-225ENST00000561225 PASKQ96RG2 1323 aa10.81□□□□□ -0.68
MARK3-225ENST00000561225 VEGFBP49765 207 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 LBX1P52954 281 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 ABHD8Q96I13 439 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 WBP1LQ9NX94 342 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 TJP1Q07157 1748 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 NRXN2Q9P2S2 1712 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 SOS1Q07889 1333 aaPredicted RBP10.8□□□□□ -0.68
MARK3-225ENST00000561225 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
MARK3-225ENST00000561225 CARMIL3Q8ND23 1372 aa10.79□□□□□ -0.68
MARK3-225ENST00000561225 SERPINB2P05120 415 aa10.79□□□□□ -0.68
MARK3-225ENST00000561225 PLEKHO1Q53GL0 409 aaPredicted RBP10.79□□□□□ -0.68
MARK3-225ENST00000561225 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
MARK3-225ENST00000561225 C2CD5Q86YS7 1000 aa10.79□□□□□ -0.68
MARK3-225ENST00000561225 NFATC2IPQ8NCF5 419 aa10.79□□□□□ -0.68
MARK3-225ENST00000561225 H0YIN7 160 aa10.78□□□□□ -0.68
MARK3-225ENST00000561225 DDNO94850 711 aaPredicted RBP10.78□□□□□ -0.68
MARK3-225ENST00000561225 MTHFSP49914 203 aa10.78□□□□□ -0.68
MARK3-225ENST00000561225 BCL2L12Q9HB09 334 aa10.78□□□□□ -0.68
MARK3-225ENST00000561225 NARFQ9UHQ1 456 aa10.78□□□□□ -0.68
MARK3-225ENST00000561225 AFDNP55196 1824 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms