RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 LZTFL1Q9NQ48 299 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 BAIAP2L1Q9UHR4 511 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 SUFUQ9UMX1 484 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 GUCA1BQ9UMX6 200 aa4.25□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC12Q8WUD4 166 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-248ENST00000558190 MAGEA9P43362 315 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 ZSCAN25Q6NSZ9 544 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 RASEFQ8IZ41 740 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 ANKRD65E5RJM6 399 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 HDAC1Q13547 482 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 BRD3Q15059 726 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 HOMEZQ8IX15 550 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 GPR161Q8N6U8 529 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 GOLGA5Q8TBA6 731 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 SELENOOQ9BVL4 669 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 NAA15Q9BXJ9 866 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 CBX8Q9HC52 389 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 CLTAP09496 248 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 EVCP57679 992 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 SPATA24Q86W54 205 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 FAM114A1Q8IWE2 563 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 ATP2B2Q01814 1243 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 RALYLQ86SE5 291 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 DNAJC25Q9H1X3 360 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 FRMD3A2A2Y4 597 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 LMOD1P29536 600 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 C8orf34Q49A92 452 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 GCKP35557 465 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 TNIKQ9UKE5 1360 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 KIF3BO15066 747 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 SEC62Q99442 399 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 RAB11FIP3O75154 756 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 ODF2LQ9ULJ1 636 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 KARSQ15046 597 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 POLE2P56282 527 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 HOOK3Q86VS8 718 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 FCHSD2O94868 740 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 NUCKS1Q9H1E3 243 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 AKR1B10O60218 316 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 FAM43BQ6ZT52 329 aaPredicted RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 IFT20Q8IY31 132 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 NGDNQ8NEJ9 315 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 RIPOR2Q9Y4F9 1068 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 CETN2P41208 172 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 CCT4P50991 539 aaKnown RBP4.24□□□□□ -1.73
ATXN3-248ENST00000558190 AFAP1L1Q8TED9 768 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 GOLGA1Q92805 767 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 BOLA2Q9H3K6 86 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 WDR66Q8TBY9 1149 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 PPP2R5AQ15172 486 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 MCTP2Q6DN12 878 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 TSPYL4Q9UJ04 414 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 MRFAP1Q9Y605 127 aa4.24□□□□□ -1.73
ATXN3-248ENST00000558190 FYB1O15117 783 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 SETDB1Q15047 1291 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 BAG1Q99933 345 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 U3KPZ7 1027 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 ZNF215Q9UL58 517 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 NDUFAB1O14561 156 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 ATP8B1O43520 1251 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 EVA1CP58658 441 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 MYO1BO43795 1136 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 MARCKSP29966 332 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 CNNM3Q8NE01 707 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 VAT1LQ9HCJ6 419 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 VPS52Q8N1B4 723 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 CABP2Q9NPB3 220 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 DTNBO60941 627 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 HSP90AA4PQ58FG1 418 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 PRC1O43663 620 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 GBP1P32455 592 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 CHAMP1Q96JM3 812 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 UBXN1Q04323 297 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 PSMD2Q13200 908 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 MRFAP1L1Q96HT8 127 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 CEP126Q9P2H0 1117 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 EPS15P42566 896 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 VPS37DQ86XT2 251 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 YY1AP1Q9H869 796 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 DDX19AQ9NUU7 478 aaKnown RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 RRP15Q9Y3B9 282 aaKnown RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 GJB2P29033 226 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 ELF2Q15723 593 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 TWISTNBQ3B726 338 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 SYKP43405 635 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 PRPF4BQ13523 1007 aaKnown RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC42Q96M95 316 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 CCT5P48643 541 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 CEP128Q6ZU80 1094 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 LMNTD2Q8IXW0 634 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 FAM200AQ8TCP9 573 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 XBP1P17861 261 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 UBAC1Q9BSL1 405 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 HOMER2Q9NSB8 354 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 ORC3Q9UBD5 711 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 ARHGAP25P42331 645 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 NAA30Q147X3 362 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 NEK11Q8NG66 645 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 TRIM7Q9C029 511 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 TRIM66O15016 1216 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms