RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 USP4Q13107 963 aa8.29□□□□□ -1.08
FOXN3-217ENST00000557572 C20orf204Q6ZNR8 217 aa8.29□□□□□ -1.08
FOXN3-217ENST00000557572 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
FOXN3-217ENST00000557572 SLC24A3Q9HC58 644 aa8.27□□□□□ -1.09
FOXN3-217ENST00000557572 ZDHHC3Q9NYG2 299 aa8.27□□□□□ -1.09
FOXN3-217ENST00000557572 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
FOXN3-217ENST00000557572 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
FOXN3-217ENST00000557572 OAS3Q9Y6K5 1087 aaKnown RBP8.26□□□□□ -1.09
FOXN3-217ENST00000557572 INHAP05111 366 aa8.25□□□□□ -1.09
FOXN3-217ENST00000557572 SMTNP53814 917 aa8.25□□□□□ -1.09
FOXN3-217ENST00000557572 GDF10P55107 478 aa8.25□□□□□ -1.09
FOXN3-217ENST00000557572 NEUROD1Q13562 356 aa8.25□□□□□ -1.09
FOXN3-217ENST00000557572 TSGA10IPQ3SY00 556 aa8.25□□□□□ -1.09
FOXN3-217ENST00000557572 CABP1Q9NZU7 370 aa8.25□□□□□ -1.09
FOXN3-217ENST00000557572 IREB2P48200 963 aaKnown RBP8.24□□□□□ -1.09
FOXN3-217ENST00000557572 SFSWAPQ12872 951 aaKnown RBP8.24□□□□□ -1.09
FOXN3-217ENST00000557572 RAB44Q7Z6P3 723 aaPredicted RBP8.24□□□□□ -1.09
FOXN3-217ENST00000557572 WFDC12Q8WWY7 111 aa8.24□□□□□ -1.09
FOXN3-217ENST00000557572 DOLKQ9UPQ8 538 aa8.24□□□□□ -1.09
FOXN3-217ENST00000557572 CD97P48960 835 aa8.23□□□□□ -1.09
FOXN3-217ENST00000557572 SCNN1DP51172 638 aa8.23□□□□□ -1.09
FOXN3-217ENST00000557572 GP2P55259 537 aaKnown RBP8.23□□□□□ -1.09
FOXN3-217ENST00000557572 PRR23CQ6ZRP0 262 aa8.23□□□□□ -1.09
FOXN3-217ENST00000557572 JPH1Q9HDC5 661 aaPredicted RBP8.23□□□□□ -1.09
FOXN3-217ENST00000557572 PARP3Q9Y6F1 533 aa8.23□□□□□ -1.09
FOXN3-217ENST00000557572 LRRC69Q6ZNQ3 347 aa8.22□□□□□ -1.09
FOXN3-217ENST00000557572 FMR1NBQ8N0W7 255 aaPredicted RBP8.22□□□□□ -1.09
FOXN3-217ENST00000557572 NUDT8Q8WV74 236 aa8.22□□□□□ -1.09
FOXN3-217ENST00000557572 SERTAD1Q9UHV2 236 aa8.22□□□□□ -1.09
FOXN3-217ENST00000557572 TBC1D8BQ0IIM8 1120 aa8.21□□□□□ -1.1
FOXN3-217ENST00000557572 SPEM2Q0P670 501 aa8.21□□□□□ -1.1
FOXN3-217ENST00000557572 TMEM259Q4ZIN3 620 aa8.21□□□□□ -1.1
FOXN3-217ENST00000557572 OXLD1Q5BKU9 147 aa8.21□□□□□ -1.1
FOXN3-217ENST00000557572 DMRTC2Q8IXT2 367 aaPredicted RBP8.21□□□□□ -1.1
FOXN3-217ENST00000557572 NEUROD4Q9HD90 331 aa8.21□□□□□ -1.1
FOXN3-217ENST00000557572 FSTP19883 344 aa8.2□□□□□ -1.1
FOXN3-217ENST00000557572 ZNF295-AS1Q8N0V1 137 aa8.2□□□□□ -1.1
FOXN3-217ENST00000557572 NOS3P29474 1203 aa8.19□□□□□ -1.1
FOXN3-217ENST00000557572 JAG1P78504 1218 aa8.19□□□□□ -1.1
FOXN3-217ENST00000557572 SIRT1Q96EB6 747 aa8.19□□□□□ -1.1
FOXN3-217ENST00000557572 DDRGK1Q96HY6 314 aa8.19□□□□□ -1.1
FOXN3-217ENST00000557572 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
FOXN3-217ENST00000557572 CDK2AP1O14519 115 aa8.18□□□□□ -1.1
FOXN3-217ENST00000557572 SLC51AQ86UW1 340 aa8.18□□□□□ -1.1
FOXN3-217ENST00000557572 MEGF10Q96KG7 1140 aa8.18□□□□□ -1.1
FOXN3-217ENST00000557572 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
FOXN3-217ENST00000557572 A6NJY4 79 aa8.17□□□□□ -1.1
FOXN3-217ENST00000557572 MED26O95402 600 aa8.17□□□□□ -1.1
FOXN3-217ENST00000557572 TXLNAP40222 546 aa8.17□□□□□ -1.1
FOXN3-217ENST00000557572 IGFLR1Q9H665 355 aa8.17□□□□□ -1.1
FOXN3-217ENST00000557572 IQSEC3Q9UPP2 1182 aaPredicted RBP8.17□□□□□ -1.1
FOXN3-217ENST00000557572 AFF1P51825 1210 aaKnown RBP8.15□□□□□ -1.1
FOXN3-217ENST00000557572 UBE2OQ9C0C9 1292 aaKnown RBP8.15□□□□□ -1.1
FOXN3-217ENST00000557572 BHMTQ93088 406 aa8.14□□□□□ -1.11
FOXN3-217ENST00000557572 MTFR1Q15390 333 aa8.13□□□□□ -1.11
FOXN3-217ENST00000557572 SLFNL1Q499Z3 407 aa8.13□□□□□ -1.11
FOXN3-217ENST00000557572 SLC4A9Q96Q91 983 aa8.13□□□□□ -1.11
FOXN3-217ENST00000557572 PSAPL1Q6NUJ1 521 aa8.12□□□□□ -1.11
FOXN3-217ENST00000557572 PHTF2Q8N3S3 785 aa8.12□□□□□ -1.11
FOXN3-217ENST00000557572 SLC6A14Q9UN76 642 aa8.12□□□□□ -1.11
FOXN3-217ENST00000557572 KIAA1324LA8MWY0 1029 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-217ENST00000557572 PTCD1O75127 700 aaKnown RBP8.11□□□□□ -1.11
FOXN3-217ENST00000557572 FBXO11Q86XK2 927 aa8.11□□□□□ -1.11
FOXN3-217ENST00000557572 KDM4CQ9H3R0 1056 aa8.11□□□□□ -1.11
FOXN3-217ENST00000557572 GPBP1L1Q9HC44 474 aaPredicted RBP8.11□□□□□ -1.11
FOXN3-217ENST00000557572 BRD7Q9NPI1 651 aa8.11□□□□□ -1.11
FOXN3-217ENST00000557572 RGS9O75916 674 aaPredicted RBP8.1□□□□□ -1.11
FOXN3-217ENST00000557572 TGFB1P01137 390 aa8.1□□□□□ -1.11
FOXN3-217ENST00000557572 L3MBTL2Q969R5 705 aa8.1□□□□□ -1.11
FOXN3-217ENST00000557572 CEP63Q96MT8 703 aa8.1□□□□□ -1.11
FOXN3-217ENST00000557572 KRTAP4-11Q9BYQ6 195 aa8.1□□□□□ -1.11
FOXN3-217ENST00000557572 TMEM229AB2RXF0 380 aa8.09□□□□□ -1.11
FOXN3-217ENST00000557572 GPR37L1O60883 481 aa8.09□□□□□ -1.11
FOXN3-217ENST00000557572 MSL1Q68DK7 614 aa8.09□□□□□ -1.11
FOXN3-217ENST00000557572 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.11
FOXN3-217ENST00000557572 ILDR2Q71H61 639 aa8.09□□□□□ -1.11
FOXN3-217ENST00000557572 EML1O00423 815 aa8.08□□□□□ -1.12
FOXN3-217ENST00000557572 SOCS7O14512 581 aa8.08□□□□□ -1.12
FOXN3-217ENST00000557572 ADAMTS4O75173 837 aa8.08□□□□□ -1.12
FOXN3-217ENST00000557572 DTWD1Q8N5C7 304 aa8.08□□□□□ -1.12
FOXN3-217ENST00000557572 ZDHHC1Q8WTX9 485 aa8.08□□□□□ -1.12
FOXN3-217ENST00000557572 KCNH4Q9UQ05 1017 aa8.08□□□□□ -1.12
FOXN3-217ENST00000557572 NDUFB9Q9Y6M9 179 aa8.08□□□□□ -1.12
FOXN3-217ENST00000557572 DZIP1LQ8IYY4 767 aaKnown RBP8.07□□□□□ -1.12
FOXN3-217ENST00000557572 ZNF232Q9UNY5 417 aa8.07□□□□□ -1.12
FOXN3-217ENST00000557572 NOS2P35228 1153 aa8.06□□□□□ -1.12
FOXN3-217ENST00000557572 SFI1A8K8P3 1242 aa8.05□□□□□ -1.12
FOXN3-217ENST00000557572 ALX3O95076 343 aa8.05□□□□□ -1.12
FOXN3-217ENST00000557572 RHPN1Q8TCX5 695 aa8.05□□□□□ -1.12
FOXN3-217ENST00000557572 C7orf43Q8WVR3 580 aa8.05□□□□□ -1.12
FOXN3-217ENST00000557572 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
FOXN3-217ENST00000557572 AKTIPQ9H8T0 292 aa8.05□□□□□ -1.12
FOXN3-217ENST00000557572 DNAJB12Q9NXW2 375 aaKnown RBP8.05□□□□□ -1.12
FOXN3-217ENST00000557572 GPC6Q9Y625 555 aaPredicted RBP8.05□□□□□ -1.12
FOXN3-217ENST00000557572 GSC2O15499 205 aa8.04□□□□□ -1.12
FOXN3-217ENST00000557572 IGLV1-40P01703 118 aa8.04□□□□□ -1.12
FOXN3-217ENST00000557572 TEAD4Q15561 434 aa8.04□□□□□ -1.12
FOXN3-217ENST00000557572 LCE4AQ5TA78 99 aa8.04□□□□□ -1.12
FOXN3-217ENST00000557572 OGFOD2Q6N063 350 aa8.04□□□□□ -1.12
FOXN3-217ENST00000557572 NAGPAQ9UK23 515 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms