RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 GSTA5Q7RTV2 222 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 PDCL2Q8N4E4 241 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 C8orf76Q96K31 380 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 SMARCA5O60264 1052 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-216ENST00000555002 URI1O94763 535 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-216ENST00000555002 SATB1Q01826 763 aa7.91□□□□□ -1.14
SYNE2-216ENST00000555002 MYD88Q99836 296 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 ZSCAN12O43309 604 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 ATXN8OSP0DMR3 200 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 PTPN14Q15678 1187 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 TCP11L2Q8N4U5 519 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 PRKRIP1Q9H875 184 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-216ENST00000555002 STXBP4Q6ZWJ1 553 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 CCDC83Q8IWF9 413 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 CCT6BQ92526 530 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 JPH4Q96JJ6 628 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 PANK2Q9BZ23 570 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 GOLGA8AA7E2F4 631 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 RRS1Q15050 365 aaKnown RBP7.9□□□□□ -1.14
SYNE2-216ENST00000555002 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 CCT2P78371 535 aaKnown RBP7.9□□□□□ -1.14
SYNE2-216ENST00000555002 GABPAQ06546 454 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 CDK19Q9BWU1 502 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 RNF216Q9NWF9 866 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-216ENST00000555002 CIZ1Q9ULV3 898 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-216ENST00000555002 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 GTPBP4Q9BZE4 634 aaKnown RBP7.9□□□□□ -1.14
SYNE2-216ENST00000555002 ADAMTS8Q9UP79 889 aa7.9□□□□□ -1.14
SYNE2-216ENST00000555002 SETD1BQ9UPS6 1966 aaKnown RBP7.9□□□□□ -1.15
SYNE2-216ENST00000555002 ZC3H6P61129 1189 aaKnown RBP7.9□□□□□ -1.15
SYNE2-216ENST00000555002 F8W031 263 aaPredicted RBP7.9□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC50Q8IVM0 306 aa7.9□□□□□ -1.15
SYNE2-216ENST00000555002 FAM114A1Q8IWE2 563 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 PNISRQ8TF01 805 aaKnown RBP7.89□□□□□ -1.15
SYNE2-216ENST00000555002 NGLY1Q96IV0 654 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 NAA15Q9BXJ9 866 aaKnown RBP7.89□□□□□ -1.15
SYNE2-216ENST00000555002 GTF2F1P35269 517 aaKnown RBP eCLIP7.89□□□□□ -1.15
SYNE2-216ENST00000555002 MPRIPQ6WCQ1 1025 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 ERMNQ8TAM6 284 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 SMIM23A6NLE4 172 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 CUL4BQ13620 913 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 GRPEL1Q9HAV7 217 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 EXOC1Q9NV70 894 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 RASAL2Q9UJF2 1139 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 OSCARQ8IYS5 282 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 FSIP1Q8NA03 581 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 ZSWIM4Q9H7M6 989 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 JADE2Q9NQC1 790 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 IFIT3O14879 490 aaKnown RBP7.89□□□□□ -1.15
SYNE2-216ENST00000555002 GMNNO75496 209 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 MAP3K12Q12852 859 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 TMC6Q7Z403 805 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC155Q8N6L0 562 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 HYPKQ9NX55 129 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 KIF4AO95239 1232 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 HLA-DOAP06340 250 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 GPTP24298 496 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 IFIT5Q13325 482 aaKnown RBP7.89□□□□□ -1.15
SYNE2-216ENST00000555002 SEPT6Q14141 434 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 FYCO1Q9BQS8 1478 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 KRT13P13646 458 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 EPSTI1Q96J88 318 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 BOLA2Q9H3K6 86 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 RASA3Q14644 834 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 ZBTB9Q96C00 473 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 CLIP2Q9UDT6 1046 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 ARID5AQ03989 594 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 FLIIQ13045 1269 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 CABP5Q9NP86 173 aa7.89□□□□□ -1.15
SYNE2-216ENST00000555002 ZNF526Q8TF50 670 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CLGNO14967 610 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-216ENST00000555002 PRPF31Q8WWY3 499 aaKnown RBP7.88□□□□□ -1.15
SYNE2-216ENST00000555002 SMARCC1Q92922 1105 aaPredicted RBP7.88□□□□□ -1.15
SYNE2-216ENST00000555002 GCC1Q96CN9 775 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 KIF5BP33176 963 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 MSL1Q68DK7 614 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 EP400NLQ6ZTU2 488 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 FANCIQ9NVI1 1328 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CALM1P0DP23 149 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CALM2P0DP24 149 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CALM3P0DP25 149 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CFAP157Q5JU67 520 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 USHBP1Q8N6Y0 703 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 KIF18AQ8NI77 898 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 IQCA1Q86XH1 822 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 TRMT112Q9UI30 125 aaKnown RBP7.88□□□□□ -1.15
SYNE2-216ENST00000555002 ISM2Q6H9L7 571 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 AKAP2Q9Y2D5 859 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC196A0A1B0GTZ2 297 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 HSF2BPO75031 334 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC88BA6NC98 1476 aa7.88□□□□□ -1.15
SYNE2-216ENST00000555002 SEPT14Q6ZU15 432 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 SELENOSQ9BQE4 189 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 MKRN1Q9UHC7 482 aaKnown RBP7.87□□□□□ -1.15
SYNE2-216ENST00000555002 CNNM3Q8NE01 707 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 NSRP1Q9H0G5 558 aaKnown RBP7.87□□□□□ -1.15
SYNE2-216ENST00000555002 FAM13AO94988 1023 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 KIAA0753Q2KHM9 967 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms