RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 HLFQ16534 295 aa17.17■□□□□ 0.34
APEX1-208ENST00000554813 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
APEX1-208ENST00000554813 TTLL7Q6ZT98 887 aa17.17■□□□□ 0.34
APEX1-208ENST00000554813 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
APEX1-208ENST00000554813 PIM2Q9P1W9 311 aa17.17■□□□□ 0.34
APEX1-208ENST00000554813 NIP7Q9Y221 180 aaKnown RBP eCLIP17.17■□□□□ 0.34
APEX1-208ENST00000554813 KCNA3P22001 575 aa17.16■□□□□ 0.34
APEX1-208ENST00000554813 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
APEX1-208ENST00000554813 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
APEX1-208ENST00000554813 BRIP1Q9BX63 1249 aa17.16■□□□□ 0.34
APEX1-208ENST00000554813 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
APEX1-208ENST00000554813 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
APEX1-208ENST00000554813 PDE6BP35913 854 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 ST5P78524 1137 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 PROSER3Q2NL68 480 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 TPTE2Q6XPS3 522 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 ZBTB3Q9H5J0 574 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
APEX1-208ENST00000554813 PDZRN3Q9UPQ7 1066 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
APEX1-208ENST00000554813 IL16Q14005 1332 aa17.15■□□□□ 0.34
APEX1-208ENST00000554813 GOLGB1Q14789 3259 aaKnown RBP17.15■□□□□ 0.34
APEX1-208ENST00000554813 H0YIN7 160 aa17.14■□□□□ 0.33
APEX1-208ENST00000554813 ANXA1P04083 346 aa17.14■□□□□ 0.33
APEX1-208ENST00000554813 CHRNA5P30532 468 aa17.14■□□□□ 0.33
APEX1-208ENST00000554813 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
APEX1-208ENST00000554813 LRP10Q7Z4F1 713 aa17.14■□□□□ 0.33
APEX1-208ENST00000554813 WDR63Q8IWG1 891 aa17.14■□□□□ 0.33
APEX1-208ENST00000554813 BCORQ6W2J9 1755 aa17.14■□□□□ 0.33
APEX1-208ENST00000554813 AFDNP55196 1824 aaKnown RBP17.14■□□□□ 0.33
APEX1-208ENST00000554813 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
APEX1-208ENST00000554813 N4BP2Q86UW6 1770 aaPredicted RBP17.13■□□□□ 0.33
APEX1-208ENST00000554813 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
APEX1-208ENST00000554813 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
APEX1-208ENST00000554813 GIGYF2Q6Y7W6 1299 aaKnown RBP17.13■□□□□ 0.33
APEX1-208ENST00000554813 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
APEX1-208ENST00000554813 C2CD5Q86YS7 1000 aa17.13■□□□□ 0.33
APEX1-208ENST00000554813 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
APEX1-208ENST00000554813 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
APEX1-208ENST00000554813 GTF2E1P29083 439 aaPredicted RBP17.12■□□□□ 0.33
APEX1-208ENST00000554813 CCDC24Q8N4L8 307 aa17.12■□□□□ 0.33
APEX1-208ENST00000554813 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
APEX1-208ENST00000554813 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
APEX1-208ENST00000554813 HYPKQ9NX55 129 aa17.12■□□□□ 0.33
APEX1-208ENST00000554813 KIAA1551Q9HCM1 1747 aa17.11■□□□□ 0.33
APEX1-208ENST00000554813 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
APEX1-208ENST00000554813 TSR2Q969E8 191 aaKnown RBP17.11■□□□□ 0.33
APEX1-208ENST00000554813 NYXQ9GZU5 481 aa17.11■□□□□ 0.33
APEX1-208ENST00000554813 UTRNP46939 3433 aa17.1■□□□□ 0.33
APEX1-208ENST00000554813 CHD4Q14839 1912 aa17.1■□□□□ 0.33
APEX1-208ENST00000554813 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
APEX1-208ENST00000554813 GPTP24298 496 aa17.09■□□□□ 0.33
APEX1-208ENST00000554813 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
APEX1-208ENST00000554813 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
APEX1-208ENST00000554813 ARHGAP27Q6ZUM4 889 aa17.09■□□□□ 0.33
APEX1-208ENST00000554813 TTLL6Q8N841 843 aa17.09■□□□□ 0.33
APEX1-208ENST00000554813 ATP10DQ9P241 1426 aa17.09■□□□□ 0.33
APEX1-208ENST00000554813 PARP10Q53GL7 1025 aa17.08■□□□□ 0.32
APEX1-208ENST00000554813 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.32
APEX1-208ENST00000554813 ANKRD13DQ6ZTN6 518 aa17.08■□□□□ 0.32
APEX1-208ENST00000554813 PPP1R42Q7Z4L9 355 aa17.08■□□□□ 0.32
APEX1-208ENST00000554813 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
APEX1-208ENST00000554813 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.32
APEX1-208ENST00000554813 NUP98P52948 1817 aa17.07■□□□□ 0.32
APEX1-208ENST00000554813 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
APEX1-208ENST00000554813 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
APEX1-208ENST00000554813 SRGNP10124 158 aa17.06■□□□□ 0.32
APEX1-208ENST00000554813 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
APEX1-208ENST00000554813 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
APEX1-208ENST00000554813 SUSD4Q5VX71 490 aa17.06■□□□□ 0.32
APEX1-208ENST00000554813 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
APEX1-208ENST00000554813 MASTLQ96GX5 879 aa17.06■□□□□ 0.32
APEX1-208ENST00000554813 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
APEX1-208ENST00000554813 UBN2Q6ZU65 1347 aa17.05■□□□□ 0.32
APEX1-208ENST00000554813 KLRG2A4D1S0 409 aaPredicted RBP17.05■□□□□ 0.32
APEX1-208ENST00000554813 CNKSR1Q969H4 720 aa17.05■□□□□ 0.32
APEX1-208ENST00000554813 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
APEX1-208ENST00000554813 STK31Q9BXU1 1019 aa17.05■□□□□ 0.32
APEX1-208ENST00000554813 BRCA1P38398 1863 aaKnown RBP17.05■□□□□ 0.32
APEX1-208ENST00000554813 IBTKQ9P2D0 1353 aaPredicted RBP17.04■□□□□ 0.32
APEX1-208ENST00000554813 FANCIQ9NVI1 1328 aa17.04■□□□□ 0.32
APEX1-208ENST00000554813 NPR1P16066 1061 aa17.04■□□□□ 0.32
APEX1-208ENST00000554813 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
APEX1-208ENST00000554813 RIC3Q7Z5B4 369 aa17.04■□□□□ 0.32
APEX1-208ENST00000554813 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
APEX1-208ENST00000554813 ZNF784Q8NCA9 323 aaPredicted RBP17.03■□□□□ 0.32
APEX1-208ENST00000554813 PHAXQ9H814 394 aaKnown RBP17.03■□□□□ 0.32
APEX1-208ENST00000554813 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
APEX1-208ENST00000554813 NTSR2O95665 410 aa17.02■□□□□ 0.32
APEX1-208ENST00000554813 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
APEX1-208ENST00000554813 NLRP10Q86W26 655 aa17.02■□□□□ 0.32
APEX1-208ENST00000554813 RNF123Q5XPI4 1314 aa17.01■□□□□ 0.31
APEX1-208ENST00000554813 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
APEX1-208ENST00000554813 ALDH1B1P30837 517 aa17.01■□□□□ 0.31
APEX1-208ENST00000554813 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
APEX1-208ENST00000554813 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
APEX1-208ENST00000554813 TRMT112Q9UI30 125 aaKnown RBP17.01■□□□□ 0.31
APEX1-208ENST00000554813 DLEC1Q9Y238 1755 aa17■□□□□ 0.31
APEX1-208ENST00000554813 VAMP4O75379 141 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms