RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 NEXNQ0ZGT2 675 aa13.66□□□□□ -0.22
PABPN1-203ENST00000553960 CEP85Q6P2H3 762 aa13.66□□□□□ -0.22
PABPN1-203ENST00000553960 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
PABPN1-203ENST00000553960 CCDC191Q8NCU4 936 aa13.66□□□□□ -0.22
PABPN1-203ENST00000553960 MEIS3Q99687 375 aa13.66□□□□□ -0.22
PABPN1-203ENST00000553960 TAF1LQ8IZX4 1826 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 A1BGP04217 495 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 HSP90AB3PQ58FF7 597 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
PABPN1-203ENST00000553960 KRT27Q7Z3Y8 459 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 SSH3Q8TE77 659 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
PABPN1-203ENST00000553960 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 NEURL1BA8MQ27 555 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 GRM8O00222 908 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 POLA2Q14181 598 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 GCKRQ14397 625 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 CCDC87Q9NVE4 849 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 MAP3K15Q6ZN16 1313 aa13.64□□□□□ -0.23
PABPN1-203ENST00000553960 KCNQ2O43526 872 aa13.63□□□□□ -0.23
PABPN1-203ENST00000553960 UBTFL1P0CB47 393 aaPredicted RBP13.63□□□□□ -0.23
PABPN1-203ENST00000553960 CLEC4GQ6UXB4 293 aa13.63□□□□□ -0.23
PABPN1-203ENST00000553960 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
PABPN1-203ENST00000553960 RIC3Q7Z5B4 369 aa13.63□□□□□ -0.23
PABPN1-203ENST00000553960 A0A087WZG4 1122 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 H7C1W4 665 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 PLSCR1O15162 318 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 ANXA1P04083 346 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 CASP7P55210 303 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 NUCB1Q02818 461 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 TCIRG1Q13488 830 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 ITPK1Q13572 414 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
PABPN1-203ENST00000553960 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
PABPN1-203ENST00000553960 PLA2G12BQ9BX93 195 aa13.62□□□□□ -0.23
PABPN1-203ENST00000553960 NOP58Q9Y2X3 529 aaKnown RBP13.62□□□□□ -0.23
PABPN1-203ENST00000553960 MYL6BP14649 208 aa13.61□□□□□ -0.23
PABPN1-203ENST00000553960 RXRBP28702 533 aa13.61□□□□□ -0.23
PABPN1-203ENST00000553960 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
PABPN1-203ENST00000553960 CRKLP46109 303 aaKnown RBP13.61□□□□□ -0.23
PABPN1-203ENST00000553960 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
PABPN1-203ENST00000553960 AK7Q96M32 723 aa13.61□□□□□ -0.23
PABPN1-203ENST00000553960 RGS17Q9UGC6 210 aaPredicted RBP13.61□□□□□ -0.23
PABPN1-203ENST00000553960 NUP98P52948 1817 aa13.61□□□□□ -0.23
PABPN1-203ENST00000553960 BCORQ6W2J9 1755 aa13.6□□□□□ -0.23
PABPN1-203ENST00000553960 ADRA2BP18089 450 aa13.6□□□□□ -0.23
PABPN1-203ENST00000553960 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
PABPN1-203ENST00000553960 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
PABPN1-203ENST00000553960 AFDNP55196 1824 aaKnown RBP13.6□□□□□ -0.23
PABPN1-203ENST00000553960 RPS6KA4O75676 772 aa13.59□□□□□ -0.23
PABPN1-203ENST00000553960 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
PABPN1-203ENST00000553960 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
PABPN1-203ENST00000553960 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
PABPN1-203ENST00000553960 ACSBG1Q96GR2 724 aa13.59□□□□□ -0.23
PABPN1-203ENST00000553960 ZBTB1Q9Y2K1 713 aa13.59□□□□□ -0.23
PABPN1-203ENST00000553960 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
PABPN1-203ENST00000553960 ZNF34Q8IZ26 560 aa13.58□□□□□ -0.24
PABPN1-203ENST00000553960 KAZALD1Q96I82 304 aa13.58□□□□□ -0.24
PABPN1-203ENST00000553960 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
PABPN1-203ENST00000553960 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
PABPN1-203ENST00000553960 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
PABPN1-203ENST00000553960 SCN7AQ01118 1682 aa13.57□□□□□ -0.24
PABPN1-203ENST00000553960 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
PABPN1-203ENST00000553960 AIMP1Q12904 312 aaKnown RBP13.57□□□□□ -0.24
PABPN1-203ENST00000553960 PARP10Q53GL7 1025 aa13.57□□□□□ -0.24
PABPN1-203ENST00000553960 LRRFIP2Q9Y608 721 aaKnown RBP13.57□□□□□ -0.24
PABPN1-203ENST00000553960 C4BP0C0L5 1744 aa13.56□□□□□ -0.24
PABPN1-203ENST00000553960 CAMTA2O94983 1202 aa13.56□□□□□ -0.24
PABPN1-203ENST00000553960 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
PABPN1-203ENST00000553960 CWF19L2Q2TBE0 894 aaKnown RBP13.56□□□□□ -0.24
PABPN1-203ENST00000553960 CHD1LQ86WJ1 897 aa13.56□□□□□ -0.24
PABPN1-203ENST00000553960 MYD88Q99836 296 aa13.56□□□□□ -0.24
PABPN1-203ENST00000553960 OSBPL3Q9H4L5 887 aa13.56□□□□□ -0.24
PABPN1-203ENST00000553960 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
PABPN1-203ENST00000553960 A0A0G2JS52 829 aa13.55□□□□□ -0.24
PABPN1-203ENST00000553960 MYT1Q01538 1121 aa13.55□□□□□ -0.24
PABPN1-203ENST00000553960 DZIP3Q86Y13 1208 aaKnown RBP13.55□□□□□ -0.24
PABPN1-203ENST00000553960 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
PABPN1-203ENST00000553960 LINC00116Q8NCU8 138 aa13.55□□□□□ -0.24
PABPN1-203ENST00000553960 COPRSQ9NQ92 184 aa13.55□□□□□ -0.24
PABPN1-203ENST00000553960 UBR3Q6ZT12 1888 aa13.55□□□□□ -0.24
PABPN1-203ENST00000553960 CSF1RP07333 972 aa13.54□□□□□ -0.24
PABPN1-203ENST00000553960 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
PABPN1-203ENST00000553960 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
PABPN1-203ENST00000553960 ZNF652Q9Y2D9 606 aa13.54□□□□□ -0.24
PABPN1-203ENST00000553960 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
PABPN1-203ENST00000553960 TNS1Q9HBL0 1735 aaKnown RBP13.53□□□□□ -0.24
PABPN1-203ENST00000553960 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
PABPN1-203ENST00000553960 PTF1AQ7RTS3 328 aa13.53□□□□□ -0.24
PABPN1-203ENST00000553960 PPP1R42Q7Z4L9 355 aa13.53□□□□□ -0.24
PABPN1-203ENST00000553960 NPM2Q86SE8 214 aaKnown RBP13.53□□□□□ -0.24
PABPN1-203ENST00000553960 ERC1Q8IUD2 1116 aa13.53□□□□□ -0.24
PABPN1-203ENST00000553960 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
PABPN1-203ENST00000553960 AOX1Q06278 1338 aa13.53□□□□□ -0.24
PABPN1-203ENST00000553960 RIC1Q4ADV7 1423 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms