RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 AIDAQ96BJ3 306 aa15.83■□□□□ 0.12
HNRNPC-206ENST00000553444 WBP1LQ9NX94 342 aa15.83■□□□□ 0.12
HNRNPC-206ENST00000553444 CCDC93Q567U6 631 aa15.82■□□□□ 0.12
HNRNPC-206ENST00000553444 GAS2L2Q8NHY3 880 aa15.82■□□□□ 0.12
HNRNPC-206ENST00000553444 FMNL2Q96PY5 1086 aa15.82■□□□□ 0.12
HNRNPC-206ENST00000553444 ZNF541Q9H0D2 1346 aa15.82■□□□□ 0.12
HNRNPC-206ENST00000553444 GNAT3A8MTJ3 354 aa15.81■□□□□ 0.12
HNRNPC-206ENST00000553444 FKBP4Q02790 459 aaKnown RBP eCLIP15.81■□□□□ 0.12
HNRNPC-206ENST00000553444 NPM2Q86SE8 214 aaKnown RBP15.81■□□□□ 0.12
HNRNPC-206ENST00000553444 DZIP3Q86Y13 1208 aaKnown RBP15.81■□□□□ 0.12
HNRNPC-206ENST00000553444 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
HNRNPC-206ENST00000553444 SCN7AQ01118 1682 aa15.8■□□□□ 0.12
HNRNPC-206ENST00000553444 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
HNRNPC-206ENST00000553444 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
HNRNPC-206ENST00000553444 ANKRD31Q8N7Z5 1873 aa15.8■□□□□ 0.12
HNRNPC-206ENST00000553444 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
HNRNPC-206ENST00000553444 CEMIPQ8WUJ3 1361 aa15.79■□□□□ 0.12
HNRNPC-206ENST00000553444 KLRG2A4D1S0 409 aaPredicted RBP15.79■□□□□ 0.12
HNRNPC-206ENST00000553444 KCNQ3O43525 872 aa15.79■□□□□ 0.12
HNRNPC-206ENST00000553444 NPR1P16066 1061 aa15.79■□□□□ 0.12
HNRNPC-206ENST00000553444 LBX1P52954 281 aa15.79■□□□□ 0.12
HNRNPC-206ENST00000553444 NBPF5PQ86XG9 351 aaPredicted RBP15.79■□□□□ 0.12
HNRNPC-206ENST00000553444 HACL1Q9UJ83 578 aa15.79■□□□□ 0.12
HNRNPC-206ENST00000553444 FER1L6Q2WGJ9 1857 aa15.78■□□□□ 0.12
HNRNPC-206ENST00000553444 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
HNRNPC-206ENST00000553444 EPHX2P34913 555 aa15.78■□□□□ 0.12
HNRNPC-206ENST00000553444 CLEC4GQ6UXB4 293 aa15.78■□□□□ 0.12
HNRNPC-206ENST00000553444 PER1O15534 1290 aaPredicted RBP15.77■□□□□ 0.12
HNRNPC-206ENST00000553444 HSPA8P11142 646 aaKnown RBP15.77■□□□□ 0.12
HNRNPC-206ENST00000553444 PIP4K2AP48426 406 aaPredicted RBP15.77■□□□□ 0.12
HNRNPC-206ENST00000553444 OLFM4Q6UX06 510 aa15.77■□□□□ 0.12
HNRNPC-206ENST00000553444 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
HNRNPC-206ENST00000553444 USP16Q9Y5T5 823 aa15.77■□□□□ 0.12
HNRNPC-206ENST00000553444 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 FZD9O00144 591 aa15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 SLC34A2O95436 690 aa15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 DEFB115Q30KQ5 88 aa15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 PNMA8AQ86V59 439 aaPredicted RBP15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 RTKN2Q8IZC4 609 aa15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
HNRNPC-206ENST00000553444 SLX4Q8IY92 1834 aa15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 KIF7Q2M1P5 1343 aa15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 PRAMEF22A3QJZ6 481 aa15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 BTBD11A6QL63 1104 aa15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 U2SURPO15042 1029 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 IARSP41252 1262 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 CC2D1BQ5T0F9 858 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 ABHD8Q96I13 439 aa15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 ZNF652Q9Y2D9 606 aa15.75■□□□□ 0.11
HNRNPC-206ENST00000553444 RGL2O15211 777 aa15.74■□□□□ 0.11
HNRNPC-206ENST00000553444 TPTE2Q6XPS3 522 aa15.74■□□□□ 0.11
HNRNPC-206ENST00000553444 WDR33Q9C0J8 1336 aaKnown RBP15.73■□□□□ 0.11
HNRNPC-206ENST00000553444 DICER1Q9UPY3 1922 aaKnown RBP15.73■□□□□ 0.11
HNRNPC-206ENST00000553444 MAP2K1Q02750 393 aaPredicted RBP15.73■□□□□ 0.11
HNRNPC-206ENST00000553444 GPC2Q8N158 579 aa15.73■□□□□ 0.11
HNRNPC-206ENST00000553444 SYNE4Q8N205 404 aa15.73■□□□□ 0.11
HNRNPC-206ENST00000553444 PCGF6Q9BYE7 350 aa15.73■□□□□ 0.11
HNRNPC-206ENST00000553444 NIP7Q9Y221 180 aaKnown RBP eCLIP15.73■□□□□ 0.11
HNRNPC-206ENST00000553444 CCDC88AQ3V6T2 1871 aa15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 SNED1Q8TER0 1413 aa15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 PHACTR3Q96KR7 559 aa15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 ABT1Q9ULW3 272 aaKnown RBP15.72■□□□□ 0.11
HNRNPC-206ENST00000553444 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
HNRNPC-206ENST00000553444 FAM161AQ3B820 660 aa15.71■□□□□ 0.11
HNRNPC-206ENST00000553444 PSMD1Q99460 953 aa15.71■□□□□ 0.11
HNRNPC-206ENST00000553444 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
HNRNPC-206ENST00000553444 ADAMTSL1Q8N6G6 1762 aa15.71■□□□□ 0.11
HNRNPC-206ENST00000553444 FAM177BA6PVY3 158 aa15.7■□□□□ 0.1
HNRNPC-206ENST00000553444 PRKAR2BP31323 418 aa15.7■□□□□ 0.1
HNRNPC-206ENST00000553444 NPC1L1Q9UHC9 1359 aa15.7■□□□□ 0.1
HNRNPC-206ENST00000553444 SCN4AP35499 1836 aa15.7■□□□□ 0.1
HNRNPC-206ENST00000553444 HLFQ16534 295 aa15.69■□□□□ 0.1
HNRNPC-206ENST00000553444 CRY2Q49AN0 593 aa15.69■□□□□ 0.1
HNRNPC-206ENST00000553444 JDP2Q8WYK2 163 aa15.69■□□□□ 0.1
HNRNPC-206ENST00000553444 RSPH6AQ9H0K4 717 aa15.69■□□□□ 0.1
HNRNPC-206ENST00000553444 ABCC12Q96J65 1359 aa15.68■□□□□ 0.1
HNRNPC-206ENST00000553444 EIF6P56537 245 aaKnown RBP15.68■□□□□ 0.1
HNRNPC-206ENST00000553444 GJA3Q9Y6H8 435 aa15.68■□□□□ 0.1
HNRNPC-206ENST00000553444 BCORQ6W2J9 1755 aa15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 ARFGEF2Q9Y6D5 1785 aa15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 LMOD1P29536 600 aaPredicted RBP15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 SCNN1DP51172 638 aa15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 FMR1Q06787 632 aaKnown RBP eCLIP15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 CC2D2BQ6DHV5 1058 aa15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 MCM10Q7L590 875 aa15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 CAPNS2Q96L46 248 aa15.67■□□□□ 0.1
HNRNPC-206ENST00000553444 GTF2E1P29083 439 aaPredicted RBP15.66■□□□□ 0.1
HNRNPC-206ENST00000553444 EPS15P42566 896 aa15.66■□□□□ 0.1
HNRNPC-206ENST00000553444 ECE1P42892 770 aa15.66■□□□□ 0.1
HNRNPC-206ENST00000553444 SIPA1L3O60292 1781 aaPredicted RBP15.65■□□□□ 0.1
HNRNPC-206ENST00000553444 COL4A5P29400 1685 aa15.65■□□□□ 0.1
HNRNPC-206ENST00000553444 CST9Q5W186 159 aa15.65■□□□□ 0.1
HNRNPC-206ENST00000553444 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
HNRNPC-206ENST00000553444 PAXIP1Q6ZW49 1069 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms