RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 SHROOM2Q13796 1616 aa14.45□□□□□ -0.1
NR4A1-215ENST00000550557 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
NR4A1-215ENST00000550557 GPR162Q16538 588 aa14.45□□□□□ -0.1
NR4A1-215ENST00000550557 TRPM1Q7Z4N2 1603 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 IMMTQ16891 758 aaKnown RBP14.44□□□□□ -0.1
NR4A1-215ENST00000550557 EYA3Q99504 573 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 CABP5Q9NP86 173 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.44□□□□□ -0.1
NR4A1-215ENST00000550557 NEK4P51957 841 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 CWC27Q6UX04 472 aaKnown RBP14.44□□□□□ -0.1
NR4A1-215ENST00000550557 GOLGA6L19H0YKK7 550 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 RNMTO43148 476 aaKnown RBP14.44□□□□□ -0.1
NR4A1-215ENST00000550557 NOC3LQ8WTT2 800 aaKnown RBP14.44□□□□□ -0.1
NR4A1-215ENST00000550557 TET3O43151 1660 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 HLA-DOAP06340 250 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 TPM1P09493 284 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 RBM26Q5T8P6 1007 aaKnown RBP14.44□□□□□ -0.1
NR4A1-215ENST00000550557 CYP46A1Q9Y6A2 500 aa14.44□□□□□ -0.1
NR4A1-215ENST00000550557 TPM3P06753 285 aa14.43□□□□□ -0.1
NR4A1-215ENST00000550557 UGGT1Q9NYU2 1555 aa14.43□□□□□ -0.1
NR4A1-215ENST00000550557 PLEKHG3A1L390 1219 aa14.43□□□□□ -0.1
NR4A1-215ENST00000550557 ZNF76P36508 570 aa14.43□□□□□ -0.1
NR4A1-215ENST00000550557 CCDC73Q6ZRK6 1079 aa14.43□□□□□ -0.1
NR4A1-215ENST00000550557 MLH3Q9UHC1 1453 aa14.43□□□□□ -0.1
NR4A1-215ENST00000550557 KRT18P05783 430 aaKnown RBP14.43□□□□□ -0.1
NR4A1-215ENST00000550557 F8W031 263 aaPredicted RBP14.43□□□□□ -0.1
NR4A1-215ENST00000550557 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
NR4A1-215ENST00000550557 MAP3K5Q99683 1374 aa14.42□□□□□ -0.1
NR4A1-215ENST00000550557 ZFYVE9O95405 1425 aa14.42□□□□□ -0.1
NR4A1-215ENST00000550557 ERVK-7P63135 1459 aa14.42□□□□□ -0.1
NR4A1-215ENST00000550557 TXLNAP40222 546 aa14.42□□□□□ -0.1
NR4A1-215ENST00000550557 CFAP65Q6ZU64 1925 aaKnown RBP14.42□□□□□ -0.1
NR4A1-215ENST00000550557 CHMP4BP1P59074 171 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 NUCB2P80303 420 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 CCDC96Q2M329 555 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 CCDC87Q9NVE4 849 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 SBNO1A3KN83 1393 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 KSR2Q6VAB6 950 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 SNRKQ9NRH2 765 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 BLOC1S2Q6QNY1 142 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 ZNF804AQ7Z570 1209 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 FLAD1Q8NFF5 587 aa14.41□□□□□ -0.1
NR4A1-215ENST00000550557 EFCAB6Q5THR3 1501 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 PDCP20941 246 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 GSTO1P78417 241 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 H0YIN7 160 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 ANKRD1Q15327 319 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
NR4A1-215ENST00000550557 RBM17Q96I25 401 aaKnown RBP14.4□□□□□ -0.1
NR4A1-215ENST00000550557 GJA3Q9Y6H8 435 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 RANBP6O60518 1105 aaKnown RBP14.4□□□□□ -0.1
NR4A1-215ENST00000550557 UQCRFS1P1P0C7P4 283 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 FAM196AQ6ZSG2 479 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 IRS4O14654 1257 aaPredicted RBP14.4□□□□□ -0.1
NR4A1-215ENST00000550557 MX1P20591 662 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 KRT32Q14532 448 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 LMBR1LQ6UX01 489 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 ZGPATQ8N5A5 531 aaKnown RBP14.4□□□□□ -0.1
NR4A1-215ENST00000550557 PCDHB15Q9Y5E8 787 aa14.4□□□□□ -0.1
NR4A1-215ENST00000550557 EDC4Q6P2E9 1401 aaKnown RBP14.39□□□□□ -0.11
NR4A1-215ENST00000550557 VEZTQ9HBM0 779 aa14.39□□□□□ -0.11
NR4A1-215ENST00000550557 NLRP1Q9C000 1473 aa14.39□□□□□ -0.11
NR4A1-215ENST00000550557 RIMBP2O15034 1052 aa14.39□□□□□ -0.11
NR4A1-215ENST00000550557 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
NR4A1-215ENST00000550557 KIF1BO60333 1816 aa14.39□□□□□ -0.11
NR4A1-215ENST00000550557 MCM4P33991 863 aa14.39□□□□□ -0.11
NR4A1-215ENST00000550557 IQCA1Q86XH1 822 aa14.39□□□□□ -0.11
NR4A1-215ENST00000550557 IQSEC3Q9UPP2 1182 aaPredicted RBP14.39□□□□□ -0.11
NR4A1-215ENST00000550557 KRT27Q7Z3Y8 459 aa14.39□□□□□ -0.11
NR4A1-215ENST00000550557 CDKL5O76039 1030 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 STK3Q13188 491 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 CERKQ8TCT0 537 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 SEC63Q9UGP8 760 aaKnown RBP14.38□□□□□ -0.11
NR4A1-215ENST00000550557 HDAC1Q13547 482 aaPredicted RBP14.38□□□□□ -0.11
NR4A1-215ENST00000550557 RABEP1Q15276 862 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 ATP2B3Q16720 1220 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 ZNF790Q6PG37 636 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 ALDH1L1O75891 902 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 IBSPP21815 317 aaPredicted RBP14.38□□□□□ -0.11
NR4A1-215ENST00000550557 MCM2P49736 904 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 PARP10Q53GL7 1025 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 ARHGAP45Q92619 1136 aa14.38□□□□□ -0.11
NR4A1-215ENST00000550557 C8orf34Q49A92 452 aa14.37□□□□□ -0.11
NR4A1-215ENST00000550557 RNF41Q9H4P4 317 aaPredicted RBP14.37□□□□□ -0.11
NR4A1-215ENST00000550557 GRM8O00222 908 aa14.37□□□□□ -0.11
NR4A1-215ENST00000550557 TRIM37O94972 964 aa14.37□□□□□ -0.11
NR4A1-215ENST00000550557 ARID3AQ99856 593 aa14.37□□□□□ -0.11
NR4A1-215ENST00000550557 KDM2BQ8NHM5 1336 aa14.36□□□□□ -0.11
NR4A1-215ENST00000550557 IPO7O95373 1038 aaKnown RBP14.36□□□□□ -0.11
NR4A1-215ENST00000550557 LINS1Q8NG48 757 aa14.36□□□□□ -0.11
NR4A1-215ENST00000550557 CLTCL1P53675 1640 aa14.36□□□□□ -0.11
NR4A1-215ENST00000550557 GOLIM4O00461 696 aa14.36□□□□□ -0.11
NR4A1-215ENST00000550557 SMARCA5O60264 1052 aaPredicted RBP14.36□□□□□ -0.11
NR4A1-215ENST00000550557 RLBP1P12271 317 aa14.36□□□□□ -0.11
NR4A1-215ENST00000550557 NASPP49321 788 aaPredicted RBP14.36□□□□□ -0.11
NR4A1-215ENST00000550557 ANKRD2Q9GZV1 360 aa14.36□□□□□ -0.11
NR4A1-215ENST00000550557 EIF6P56537 245 aaKnown RBP14.36□□□□□ -0.11
NR4A1-215ENST00000550557 CTCFLQ8NI51 663 aaPredicted RBP14.36□□□□□ -0.11
NR4A1-215ENST00000550557 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms