RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 SSH3Q8TE77 659 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 OSBPL3Q9H4L5 887 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 NAP1L2Q9ULW6 460 aaPredicted RBP11.75□□□□□ -0.53
DDX11-229ENST00000545668 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
DDX11-229ENST00000545668 KSR2Q6VAB6 950 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 BRINP3Q76B58 766 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 ZNF771Q7L3S4 317 aaPredicted RBP11.75□□□□□ -0.53
DDX11-229ENST00000545668 TTC5Q8N0Z6 440 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 KIF2CQ99661 725 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 PRDM11Q9NQV5 511 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 CHMP3Q9Y3E7 222 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 TRERF1Q96PN7 1200 aa11.75□□□□□ -0.53
DDX11-229ENST00000545668 LMO7Q8WWI1 1683 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 CCDC173Q0VFZ6 552 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.74□□□□□ -0.53
DDX11-229ENST00000545668 OVOS2A0A0G2JMS6 1433 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 ERBB4Q15303 1308 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 ADCY9O60503 1353 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 MYL6BP14649 208 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 USP26Q9BXU7 913 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 UQCRHLA0A096LP55 91 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 UQCRHP07919 91 aa11.74□□□□□ -0.53
DDX11-229ENST00000545668 ERC2O15083 957 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 RAB11FIP3O75154 756 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 KCNJ4P48050 445 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 CWF19L2Q2TBE0 894 aaKnown RBP11.73□□□□□ -0.53
DDX11-229ENST00000545668 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 DDX21Q9NR30 783 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX11-229ENST00000545668 SLAIN2Q9P270 581 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 TPM2P07951 284 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 DCAF5Q96JK2 942 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 ALS2Q96Q42 1657 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 RGPD5Q99666 1765 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 STRCP1A6NGW2 1772 aa11.73□□□□□ -0.53
DDX11-229ENST00000545668 ALDH1L1O75891 902 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
DDX11-229ENST00000545668 CABP4P57796 275 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 ZSCAN30Q86W11 494 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 RHPN1Q8TCX5 695 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
DDX11-229ENST00000545668 KDM3BQ7LBC6 1761 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 CYP27B1O15528 508 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 ZNF496Q96IT1 587 aaPredicted RBP11.72□□□□□ -0.53
DDX11-229ENST00000545668 TAOK2Q9UL54 1235 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 POLA2Q14181 598 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 ZNF335Q9H4Z2 1342 aaPredicted RBP11.72□□□□□ -0.53
DDX11-229ENST00000545668 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 MEGF6O75095 1541 aa11.72□□□□□ -0.53
DDX11-229ENST00000545668 ISY1Q9ULR0 285 aaKnown RBP11.71□□□□□ -0.53
DDX11-229ENST00000545668 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.53
DDX11-229ENST00000545668 LINS1Q8NG48 757 aa11.71□□□□□ -0.53
DDX11-229ENST00000545668 DDX54Q8TDD1 881 aaKnown RBP11.71□□□□□ -0.54
DDX11-229ENST00000545668 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
DDX11-229ENST00000545668 SALL3Q9BXA9 1300 aa11.7□□□□□ -0.54
DDX11-229ENST00000545668 SNRPA1P09661 255 aaKnown RBP11.7□□□□□ -0.54
DDX11-229ENST00000545668 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
DDX11-229ENST00000545668 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
DDX11-229ENST00000545668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
DDX11-229ENST00000545668 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
DDX11-229ENST00000545668 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
DDX11-229ENST00000545668 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
DDX11-229ENST00000545668 GRM8O00222 908 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
DDX11-229ENST00000545668 PDIA6Q15084 440 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
DDX11-229ENST00000545668 STRN4Q9NRL3 753 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 CPDO75976 1380 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 RBSNQ9H1K0 784 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 EVA1CP58658 441 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 TSC1Q92574 1164 aa11.69□□□□□ -0.54
DDX11-229ENST00000545668 CLASRPQ8N2M8 674 aaKnown RBP11.68□□□□□ -0.54
DDX11-229ENST00000545668 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
DDX11-229ENST00000545668 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
DDX11-229ENST00000545668 ZCRB1Q8TBF4 217 aaKnown RBP11.68□□□□□ -0.54
DDX11-229ENST00000545668 CHMLP26374 656 aa11.68□□□□□ -0.54
DDX11-229ENST00000545668 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.68□□□□□ -0.54
DDX11-229ENST00000545668 UNC5CLQ8IV45 518 aa11.68□□□□□ -0.54
DDX11-229ENST00000545668 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
DDX11-229ENST00000545668 WDR17Q8IZU2 1322 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 KDM4FA0A1W2PPD8 638 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 TNNT3P45378 269 aaPredicted RBP11.67□□□□□ -0.54
DDX11-229ENST00000545668 ANKRD13DQ6ZTN6 518 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 SYAP1Q96A49 352 aaPredicted RBP11.67□□□□□ -0.54
DDX11-229ENST00000545668 MYD88Q99836 296 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 FIBPO43427 364 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 KIAA2012Q0VF49 1180 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 TMX3Q96JJ7 454 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 CWC22Q9HCG8 908 aaKnown RBP11.67□□□□□ -0.54
DDX11-229ENST00000545668 AOX1Q06278 1338 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 MTX1Q13505 466 aa11.67□□□□□ -0.54
DDX11-229ENST00000545668 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms