RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.48■■□□□ 1.67
LSM14A-202ENST00000540746 MRC1P22897 1456 aa25.47■■□□□ 1.67
LSM14A-202ENST00000540746 XIRP1Q702N8 1843 aaKnown RBP25.47■■□□□ 1.67
LSM14A-202ENST00000540746 TTC41PQ6P2S7 1318 aa25.47■■□□□ 1.67
LSM14A-202ENST00000540746 LRP10Q7Z4F1 713 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 RIC3Q7Z5B4 369 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 CNTROBQ8N137 903 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 CLASRPQ8N2M8 674 aaKnown RBP25.46■■□□□ 1.67
LSM14A-202ENST00000540746 XAGE3Q8WTP9 111 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 PTMSP20962 102 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 HSPA4P34932 840 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 DCAF5Q96JK2 942 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 USP16Q9Y5T5 823 aa25.46■■□□□ 1.67
LSM14A-202ENST00000540746 EPB41L2O43491 1005 aaKnown RBP25.45■■□□□ 1.67
LSM14A-202ENST00000540746 COPS6Q7L5N1 327 aa25.45■■□□□ 1.67
LSM14A-202ENST00000540746 UPF3BQ9BZI7 483 aaKnown RBP25.45■■□□□ 1.67
LSM14A-202ENST00000540746 HDAC5Q9UQL6 1122 aa25.45■■□□□ 1.67
LSM14A-202ENST00000540746 PANK2Q9BZ23 570 aa25.45■■□□□ 1.66
LSM14A-202ENST00000540746 CPDO75976 1380 aa25.44■■□□□ 1.66
LSM14A-202ENST00000540746 GLRX3O76003 335 aaKnown RBP25.44■■□□□ 1.66
LSM14A-202ENST00000540746 PIP4K2AP48426 406 aaPredicted RBP25.44■■□□□ 1.66
LSM14A-202ENST00000540746 LARP1Q6PKG0 1096 aaKnown RBP25.44■■□□□ 1.66
LSM14A-202ENST00000540746 NEURL1BA8MQ27 555 aa25.44■■□□□ 1.66
LSM14A-202ENST00000540746 MCM2P49736 904 aa25.44■■□□□ 1.66
LSM14A-202ENST00000540746 RAD50Q92878 1312 aa25.43■■□□□ 1.66
LSM14A-202ENST00000540746 GOLGA6L22H0YM25 854 aa25.43■■□□□ 1.66
LSM14A-202ENST00000540746 SASH1O94885 1247 aa25.43■■□□□ 1.66
LSM14A-202ENST00000540746 LSG1Q9H089 658 aaKnown RBP25.43■■□□□ 1.66
LSM14A-202ENST00000540746 CUL4AQ13619 759 aa25.42■■□□□ 1.66
LSM14A-202ENST00000540746 ERC1Q8IUD2 1116 aa25.42■■□□□ 1.66
LSM14A-202ENST00000540746 ECHDC1Q9NTX5 307 aa25.42■■□□□ 1.66
LSM14A-202ENST00000540746 MCTP1Q6DN14 999 aa25.42■■□□□ 1.66
LSM14A-202ENST00000540746 CWC27Q6UX04 472 aaKnown RBP25.42■■□□□ 1.66
LSM14A-202ENST00000540746 NOL8Q76FK4 1167 aaKnown RBP25.42■■□□□ 1.66
LSM14A-202ENST00000540746 GAS2L3Q86XJ1 694 aa25.42■■□□□ 1.66
LSM14A-202ENST00000540746 PLEKHG2Q9H7P9 1386 aa25.42■■□□□ 1.66
LSM14A-202ENST00000540746 SNRPA1P09661 255 aaKnown RBP25.41■■□□□ 1.66
LSM14A-202ENST00000540746 GCKRQ14397 625 aa25.41■■□□□ 1.66
LSM14A-202ENST00000540746 METTL22Q9BUU2 404 aaPredicted RBP25.41■■□□□ 1.66
LSM14A-202ENST00000540746 BRINP3Q76B58 766 aa25.41■■□□□ 1.66
LSM14A-202ENST00000540746 TTC5Q8N0Z6 440 aa25.41■■□□□ 1.66
LSM14A-202ENST00000540746 MYD88Q99836 296 aa25.41■■□□□ 1.66
LSM14A-202ENST00000540746 IFIT2P09913 472 aaKnown RBP25.4■■□□□ 1.66
LSM14A-202ENST00000540746 EPHA10Q5JZY3 1008 aa25.4■■□□□ 1.66
LSM14A-202ENST00000540746 AACSQ86V21 672 aa25.4■■□□□ 1.66
LSM14A-202ENST00000540746 GLI3P10071 1580 aa25.4■■□□□ 1.66
LSM14A-202ENST00000540746 EAF2Q96CJ1 260 aaPredicted RBP25.39■■□□□ 1.66
LSM14A-202ENST00000540746 MRE11P49959 708 aa25.39■■□□□ 1.65
LSM14A-202ENST00000540746 NEXNQ0ZGT2 675 aa25.39■■□□□ 1.65
LSM14A-202ENST00000540746 ANKRD13DQ6ZTN6 518 aa25.39■■□□□ 1.65
LSM14A-202ENST00000540746 KLHL40Q2TBA0 621 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 KLHDC4Q8TBB5 520 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 FMNL2Q96PY5 1086 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 GRPEL1Q9HAV7 217 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 LMBRD1Q9NUN5 540 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 SNX14Q9Y5W7 946 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 RASEFQ8IZ41 740 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 CHAMP1Q96JM3 812 aa25.38■■□□□ 1.65
LSM14A-202ENST00000540746 DDX49Q9Y6V7 483 aaKnown RBP25.38■■□□□ 1.65
LSM14A-202ENST00000540746 CABP4P57796 275 aa25.37■■□□□ 1.65
LSM14A-202ENST00000540746 SIL1Q9H173 461 aa25.37■■□□□ 1.65
LSM14A-202ENST00000540746 G3BP1Q13283 466 aaKnown RBP eCLIP25.37■■□□□ 1.653e-8■■■■■ 29.9
LSM14A-202ENST00000540746 JARID2Q92833 1246 aaPredicted RBP25.36■■□□□ 1.65
LSM14A-202ENST00000540746 TLR7Q9NYK1 1049 aaKnown RBP25.36■■□□□ 1.65
LSM14A-202ENST00000540746 ISY1Q9ULR0 285 aaKnown RBP25.36■■□□□ 1.65
LSM14A-202ENST00000540746 INTS4Q96HW7 963 aaKnown RBP25.35■■□□□ 1.65
LSM14A-202ENST00000540746 GPATCH3Q96I76 525 aa25.35■■□□□ 1.65
LSM14A-202ENST00000540746 CCDC8Q9H0W5 538 aaPredicted RBP25.35■■□□□ 1.65
LSM14A-202ENST00000540746 PARP4Q9UKK3 1724 aaKnown RBP25.35■■□□□ 1.65
LSM14A-202ENST00000540746 DIAPH3Q9NSV4 1193 aa25.35■■□□□ 1.65
LSM14A-202ENST00000540746 AFDNP55196 1824 aaKnown RBP25.35■■□□□ 1.65
LSM14A-202ENST00000540746 ARFGEF2Q9Y6D5 1785 aa25.34■■□□□ 1.65
LSM14A-202ENST00000540746 KIAA1211Q6ZU35 1233 aa25.34■■□□□ 1.65
LSM14A-202ENST00000540746 PTH1RQ03431 593 aa25.33■■□□□ 1.65
LSM14A-202ENST00000540746 FOXD4L5Q5VV16 416 aaPredicted RBP25.33■■□□□ 1.65
LSM14A-202ENST00000540746 FOXD4L4Q8WXT5 416 aaPredicted RBP25.33■■□□□ 1.65
LSM14A-202ENST00000540746 EVI5LQ96CN4 794 aa25.32■■□□□ 1.64
LSM14A-202ENST00000540746 TTC14Q96N46 770 aa25.32■■□□□ 1.64
LSM14A-202ENST00000540746 WDR17Q8IZU2 1322 aa25.32■■□□□ 1.64
LSM14A-202ENST00000540746 LAMB4A4D0S4 1761 aa25.32■■□□□ 1.64
LSM14A-202ENST00000540746 BRD1O95696 1058 aa25.32■■□□□ 1.64
LSM14A-202ENST00000540746 PRDM11Q9NQV5 511 aa25.32■■□□□ 1.64
LSM14A-202ENST00000540746 ATP5J2-PTCD1G3V325 749 aa25.3■■□□□ 1.64
LSM14A-202ENST00000540746 PTCD1O75127 700 aaKnown RBP25.3■■□□□ 1.64
LSM14A-202ENST00000540746 PRPF40AO75400 957 aaKnown RBP25.3■■□□□ 1.64
LSM14A-202ENST00000540746 RUFY2Q8WXA3 655 aa25.3■■□□□ 1.64
LSM14A-202ENST00000540746 RFX5P48382 616 aaPredicted RBP25.29■■□□□ 1.64
LSM14A-202ENST00000540746 UBE3BQ7Z3V4 1068 aa25.29■■□□□ 1.64
LSM14A-202ENST00000540746 NBPF26B4DH59 902 aa25.29■■□□□ 1.64
LSM14A-202ENST00000540746 NBPF14Q5TI25 921 aa25.29■■□□□ 1.64
LSM14A-202ENST00000540746 NBPF10Q6P3W6 841 aaKnown RBP25.29■■□□□ 1.64
LSM14A-202ENST00000540746 TOM1L2Q6ZVM7 507 aa25.29■■□□□ 1.64
LSM14A-202ENST00000540746 NBPF15Q8N660 670 aa25.29■■□□□ 1.64
LSM14A-202ENST00000540746 FAM43AQ8N2R8 423 aa25.28■■□□□ 1.64
LSM14A-202ENST00000540746 ZCRB1Q8TBF4 217 aaKnown RBP25.28■■□□□ 1.64
LSM14A-202ENST00000540746 SOS2Q07890 1332 aaPredicted RBP25.28■■□□□ 1.64
LSM14A-202ENST00000540746 FAM227BQ96M60 508 aa25.28■■□□□ 1.64
LSM14A-202ENST00000540746 COPRSQ9NQ92 184 aa25.28■■□□□ 1.64
LSM14A-202ENST00000540746 COL5A2P05997 1499 aaPredicted RBP25.28■■□□□ 1.64
LSM14A-202ENST00000540746 CPA1P15085 419 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms