RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
DNMT1-203ENST00000540357 ZNF330Q9Y3S2 320 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-203ENST00000540357 RIOK3O14730 519 aaKnown RBP15.24■□□□□ 0.03
DNMT1-203ENST00000540357 APPP05067 770 aa15.24■□□□□ 0.03
DNMT1-203ENST00000540357 A0A0G2JS52 829 aa15.24■□□□□ 0.03
DNMT1-203ENST00000540357 FILIP1LQ4L180 1135 aa15.24■□□□□ 0.03
DNMT1-203ENST00000540357 ABTB2Q8N961 1025 aa15.24■□□□□ 0.03
DNMT1-203ENST00000540357 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
DNMT1-203ENST00000540357 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
DNMT1-203ENST00000540357 NPHP3Q7Z494 1330 aa15.24■□□□□ 0.03
DNMT1-203ENST00000540357 GADD45BO75293 160 aaPredicted RBP15.24■□□□□ 0.03
DNMT1-203ENST00000540357 SKILP12757 684 aa15.24■□□□□ 0.03
DNMT1-203ENST00000540357 IL13P35225 146 aa15.23■□□□□ 0.03
DNMT1-203ENST00000540357 DDX54Q8TDD1 881 aaKnown RBP15.23■□□□□ 0.03
DNMT1-203ENST00000540357 NUTM2GQ5VZR2 741 aa15.23■□□□□ 0.03
DNMT1-203ENST00000540357 CCAR1Q8IX12 1150 aaKnown RBP15.23■□□□□ 0.03
DNMT1-203ENST00000540357 KLHL34Q8N239 644 aa15.23■□□□□ 0.03
DNMT1-203ENST00000540357 BTBD11A6QL63 1104 aa15.22■□□□□ 0.03
DNMT1-203ENST00000540357 OSCARQ8IYS5 282 aa15.22■□□□□ 0.03
DNMT1-203ENST00000540357 GABPB1Q06547 395 aaPredicted RBP15.22■□□□□ 0.03
DNMT1-203ENST00000540357 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
DNMT1-203ENST00000540357 SLU7O95391 586 aaKnown RBP15.22■□□□□ 0.03
DNMT1-203ENST00000540357 UTP14CQ5TAP6 766 aaKnown RBP15.22■□□□□ 0.03
DNMT1-203ENST00000540357 NECAB1Q8N987 351 aa15.22■□□□□ 0.03
DNMT1-203ENST00000540357 NOC3LQ8WTT2 800 aaKnown RBP15.22■□□□□ 0.03
DNMT1-203ENST00000540357 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
DNMT1-203ENST00000540357 CTNNA3Q9UI47 895 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 PSME1Q06323 249 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 CFAP100Q494V2 611 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 FSIP1Q8NA03 581 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 MADDQ8WXG6 1647 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 PPFIBP1Q86W92 1011 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 NPATQ14207 1427 aa15.21■□□□□ 0.03
DNMT1-203ENST00000540357 ERICH2A1L162 156 aa15.21■□□□□ 0.02
DNMT1-203ENST00000540357 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.02
DNMT1-203ENST00000540357 ZNF530Q6P9A1 599 aaPredicted RBP15.21■□□□□ 0.02
DNMT1-203ENST00000540357 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.02
DNMT1-203ENST00000540357 BCL2L12Q9HB09 334 aa15.21■□□□□ 0.02
DNMT1-203ENST00000540357 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
DNMT1-203ENST00000540357 CDKL5O76039 1030 aa15.2■□□□□ 0.02
DNMT1-203ENST00000540357 FAM177A1Q8N128 213 aaPredicted RBP15.2■□□□□ 0.02
DNMT1-203ENST00000540357 CASQ1P31415 396 aa15.2■□□□□ 0.02
DNMT1-203ENST00000540357 RBM8AQ9Y5S9 174 aaKnown RBP15.2■□□□□ 0.02
DNMT1-203ENST00000540357 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
DNMT1-203ENST00000540357 YTHDC2Q9H6S0 1430 aaKnown RBP15.2■□□□□ 0.02
DNMT1-203ENST00000540357 GOLGA6L9A6NEM1 432 aa15.2■□□□□ 0.02
DNMT1-203ENST00000540357 CHL1O00533 1208 aa15.2■□□□□ 0.02
DNMT1-203ENST00000540357 PIP4K2AP48426 406 aaPredicted RBP15.2■□□□□ 0.02
DNMT1-203ENST00000540357 RUFY3Q7L099 469 aa15.2■□□□□ 0.02
DNMT1-203ENST00000540357 PDLIM2Q96JY6 352 aa15.2■□□□□ 0.02
DNMT1-203ENST00000540357 FAM177BA6PVY3 158 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 HSPA4P34932 840 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 TMC6Q7Z403 805 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 RUFY1Q96T51 708 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 FAM135BQ49AJ0 1406 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 C17orf53Q8N3J3 647 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-203ENST00000540357 RGS12O14924 1447 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 DMTNQ08495 405 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 KRT24Q2M2I5 525 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 NEK1Q96PY6 1258 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 CCDC47Q96A33 483 aaKnown RBP15.19■□□□□ 0.02
DNMT1-203ENST00000540357 GBP3Q9H0R5 595 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 SNX14Q9Y5W7 946 aa15.19■□□□□ 0.02
DNMT1-203ENST00000540357 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
DNMT1-203ENST00000540357 RAPGEF4Q8WZA2 1011 aa15.18■□□□□ 0.02
DNMT1-203ENST00000540357 RAD50Q92878 1312 aa15.18■□□□□ 0.02
DNMT1-203ENST00000540357 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
DNMT1-203ENST00000540357 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
DNMT1-203ENST00000540357 XBP1P17861 261 aa15.18■□□□□ 0.02
DNMT1-203ENST00000540357 U2AF2P26368 475 aaKnown RBP eCLIP15.18■□□□□ 0.026e-7■■■□□ 16.6
DNMT1-203ENST00000540357 TXLNBQ8N3L3 684 aa15.18■□□□□ 0.02
DNMT1-203ENST00000540357 SRRTQ9BXP5 876 aaKnown RBP15.18■□□□□ 0.02
DNMT1-203ENST00000540357 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-203ENST00000540357 ERO1AQ96HE7 468 aa15.17■□□□□ 0.02
DNMT1-203ENST00000540357 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-203ENST00000540357 OSBPL3Q9H4L5 887 aa15.17■□□□□ 0.02
DNMT1-203ENST00000540357 EDC4Q6P2E9 1401 aaKnown RBP15.17■□□□□ 0.02
DNMT1-203ENST00000540357 SGSM2O43147 1006 aa15.17■□□□□ 0.02
DNMT1-203ENST00000540357 SLC3A2P08195 630 aaKnown RBP15.17■□□□□ 0.02
DNMT1-203ENST00000540357 CUL4AQ13619 759 aa15.17■□□□□ 0.02
DNMT1-203ENST00000540357 CCDC158Q5M9N0 1113 aa15.17■□□□□ 0.02
DNMT1-203ENST00000540357 ZNF75DP51815 510 aa15.16■□□□□ 0.02
DNMT1-203ENST00000540357 PCMTD1Q96MG8 357 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-203ENST00000540357 CCDC69A6NI79 296 aa15.16■□□□□ 0.02
DNMT1-203ENST00000540357 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
DNMT1-203ENST00000540357 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
DNMT1-203ENST00000540357 CAGE1Q8TC20 777 aa15.16■□□□□ 0.02
DNMT1-203ENST00000540357 POLR3GO15318 223 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-203ENST00000540357 C8orf76Q96K31 380 aa15.16■□□□□ 0.02
DNMT1-203ENST00000540357 CLSTN2Q9H4D0 955 aa15.16■□□□□ 0.02
DNMT1-203ENST00000540357 BRMS1Q9HCU9 246 aa15.16■□□□□ 0.02
DNMT1-203ENST00000540357 NCOA3Q9Y6Q9 1424 aa15.15■□□□□ 0.02
DNMT1-203ENST00000540357 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
DNMT1-203ENST00000540357 SART3Q15020 963 aaKnown RBP15.15■□□□□ 0.02
DNMT1-203ENST00000540357 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
DNMT1-203ENST00000540357 MAP3K4Q9Y6R4 1608 aa15.15■□□□□ 0.02
DNMT1-203ENST00000540357 PI4KAP2A4QPH2 592 aa15.14■□□□□ 0.01
DNMT1-203ENST00000540357 HSP90AB2PQ58FF8 381 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms