RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 ANKIB1Q9P2G1 1089 aa11.56□□□□□ -0.56
TRAV11-201ENST00000539512 ALKBH2Q6NS38 261 aa11.55□□□□□ -0.56
TRAV11-201ENST00000539512 DYRK1BQ9Y463 629 aa11.55□□□□□ -0.56
TRAV11-201ENST00000539512 NOM1Q5C9Z4 860 aaKnown RBP11.54□□□□□ -0.56
TRAV11-201ENST00000539512 IFT43Q96FT9 208 aa11.54□□□□□ -0.56
TRAV11-201ENST00000539512 KLK14Q9P0G3 267 aa11.54□□□□□ -0.56
TRAV11-201ENST00000539512 SOBPA7XYQ1 873 aa11.53□□□□□ -0.56
TRAV11-201ENST00000539512 F11P03951 625 aa11.53□□□□□ -0.56
TRAV11-201ENST00000539512 MPSTP25325 297 aa11.53□□□□□ -0.56
TRAV11-201ENST00000539512 MFAP1P55081 439 aaKnown RBP11.53□□□□□ -0.56
TRAV11-201ENST00000539512 RIPOR1Q6ZS17 1223 aa11.53□□□□□ -0.56
TRAV11-201ENST00000539512 TRIM47Q96LD4 638 aa11.53□□□□□ -0.56
TRAV11-201ENST00000539512 GMPR2Q9P2T1 348 aaKnown RBP11.53□□□□□ -0.56
TRAV11-201ENST00000539512 EFHC2Q5JST6 749 aa11.52□□□□□ -0.57
TRAV11-201ENST00000539512 LRFN2Q9ULH4 789 aa11.52□□□□□ -0.57
TRAV11-201ENST00000539512 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
TRAV11-201ENST00000539512 ATP4AP20648 1035 aa11.51□□□□□ -0.57
TRAV11-201ENST00000539512 TNFRSF10BO14763 440 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 NDUFB5O43674 189 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 MARSP56192 900 aaKnown RBP11.5□□□□□ -0.57
TRAV11-201ENST00000539512 PTSQ03393 145 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 LRRC69Q6ZNQ3 347 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 TTC16Q8NEE8 873 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 RUBCNLQ9H714 662 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 FAM13BQ9NYF5 915 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 BRPF3Q9ULD4 1205 aa11.5□□□□□ -0.57
TRAV11-201ENST00000539512 A0A1W2PNR3 127 aa11.49□□□□□ -0.57
TRAV11-201ENST00000539512 TGFBR3LH3BV60 316 aa11.49□□□□□ -0.57
TRAV11-201ENST00000539512 PCSK2P16519 638 aa11.49□□□□□ -0.57
TRAV11-201ENST00000539512 EIF1AXP47813 144 aaKnown RBP11.49□□□□□ -0.57
TRAV11-201ENST00000539512 H7C1W4 665 aa11.48□□□□□ -0.57
TRAV11-201ENST00000539512 MAPK1P28482 360 aa11.48□□□□□ -0.57
TRAV11-201ENST00000539512 TREML1Q86YW5 311 aa11.48□□□□□ -0.57
TRAV11-201ENST00000539512 HSH2DQ96JZ2 352 aa11.48□□□□□ -0.57
TRAV11-201ENST00000539512 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
TRAV11-201ENST00000539512 NPR3P17342 541 aa11.47□□□□□ -0.57
TRAV11-201ENST00000539512 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
TRAV11-201ENST00000539512 CRISPLD1Q9H336 500 aa11.47□□□□□ -0.57
TRAV11-201ENST00000539512 DCTN4Q9UJW0 460 aa11.47□□□□□ -0.57
TRAV11-201ENST00000539512 ZAP70P43403 619 aa11.46□□□□□ -0.57
TRAV11-201ENST00000539512 LBRQ14739 615 aaKnown RBP11.46□□□□□ -0.57
TRAV11-201ENST00000539512 IER5Q5VY09 327 aa11.46□□□□□ -0.57
TRAV11-201ENST00000539512 FIGNL1Q6PIW4 674 aa11.46□□□□□ -0.57
TRAV11-201ENST00000539512 ZSCAN29Q8IWY8 852 aaPredicted RBP11.46□□□□□ -0.57
TRAV11-201ENST00000539512 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.57
TRAV11-201ENST00000539512 MICAL2O94851 1124 aa11.45□□□□□ -0.58
TRAV11-201ENST00000539512 EPB42P16452 691 aa11.45□□□□□ -0.58
TRAV11-201ENST00000539512 NLRP8Q86W28 1048 aa11.45□□□□□ -0.58
TRAV11-201ENST00000539512 CCDC155Q8N6L0 562 aa11.45□□□□□ -0.58
TRAV11-201ENST00000539512 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
TRAV11-201ENST00000539512 SENP3-EIF4A1A0A087X0R7 540 aa11.44□□□□□ -0.58
TRAV11-201ENST00000539512 DNM1Q05193 864 aaKnown RBP11.44□□□□□ -0.58
TRAV11-201ENST00000539512 ZNF280CQ8ND82 737 aa11.44□□□□□ -0.58
TRAV11-201ENST00000539512 NUCKS1Q9H1E3 243 aaKnown RBP11.44□□□□□ -0.58
TRAV11-201ENST00000539512 SLC35F4A4IF30 521 aa11.43□□□□□ -0.58
TRAV11-201ENST00000539512 SNRPBP14678 240 aaKnown RBP11.43□□□□□ -0.58
TRAV11-201ENST00000539512 IDH3AP50213 366 aa11.43□□□□□ -0.58
TRAV11-201ENST00000539512 ARHGAP4P98171 946 aa11.43□□□□□ -0.58
TRAV11-201ENST00000539512 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
TRAV11-201ENST00000539512 USP5P45974 858 aa11.42□□□□□ -0.58
TRAV11-201ENST00000539512 ARSDP51689 593 aa11.42□□□□□ -0.58
TRAV11-201ENST00000539512 BTLAQ7Z6A9 289 aa11.42□□□□□ -0.58
TRAV11-201ENST00000539512 ZBTB39O15060 712 aa11.41□□□□□ -0.58
TRAV11-201ENST00000539512 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
TRAV11-201ENST00000539512 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
TRAV11-201ENST00000539512 ATCAYQ86WG3 371 aa11.41□□□□□ -0.58
TRAV11-201ENST00000539512 GPR152Q8TDT2 470 aa11.41□□□□□ -0.58
TRAV11-201ENST00000539512 C7orf43Q8WVR3 580 aa11.41□□□□□ -0.58
TRAV11-201ENST00000539512 EDEM1Q92611 657 aa11.41□□□□□ -0.58
TRAV11-201ENST00000539512 BCS1LQ9Y276 419 aa11.41□□□□□ -0.58
TRAV11-201ENST00000539512 ERCC3P19447 782 aa11.4□□□□□ -0.58
TRAV11-201ENST00000539512 MZF1P28698 734 aaPredicted RBP11.4□□□□□ -0.58
TRAV11-201ENST00000539512 PDE3BQ13370 1112 aa11.4□□□□□ -0.58
TRAV11-201ENST00000539512 TRIM22Q8IYM9 498 aa11.4□□□□□ -0.58
TRAV11-201ENST00000539512 RGL4Q8IZJ4 473 aa11.4□□□□□ -0.58
TRAV11-201ENST00000539512 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
TRAV11-201ENST00000539512 ATXN7O15265 892 aaPredicted RBP11.39□□□□□ -0.59
TRAV11-201ENST00000539512 ITGA6P23229 1130 aa11.39□□□□□ -0.59
TRAV11-201ENST00000539512 CITED4Q96RK1 184 aa11.39□□□□□ -0.59
TRAV11-201ENST00000539512 FNDC3AQ9Y2H6 1198 aaKnown RBP11.39□□□□□ -0.59
TRAV11-201ENST00000539512 CDC14CA4D256 554 aa11.38□□□□□ -0.59
TRAV11-201ENST00000539512 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
TRAV11-201ENST00000539512 CCDC87Q9NVE4 849 aa11.38□□□□□ -0.59
TRAV11-201ENST00000539512 POLIQ9UNA4 740 aa11.38□□□□□ -0.59
TRAV11-201ENST00000539512 PCDHGC4Q9Y5F7 938 aa11.38□□□□□ -0.59
TRAV11-201ENST00000539512 FZD6O60353 706 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 TYRO3Q06418 890 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 ECM1Q16610 540 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 FAM26DQ5JW98 314 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
TRAV11-201ENST00000539512 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 ZCCHC2Q9C0B9 1178 aaKnown RBP11.37□□□□□ -0.59
TRAV11-201ENST00000539512 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 PHF24Q9UPV7 400 aa11.37□□□□□ -0.59
TRAV11-201ENST00000539512 KHNYNO15037 678 aaKnown RBP11.36□□□□□ -0.59
TRAV11-201ENST00000539512 EHHADHQ08426 723 aa11.36□□□□□ -0.59
TRAV11-201ENST00000539512 NUDT16Q96DE0 195 aaKnown RBP11.36□□□□□ -0.59
TRAV11-201ENST00000539512 KLRG1Q96E93 195 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms