RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-215	ENST00000537551	HLF	Q16534	295 aa		30.15	■■■□□ 2.42
CHFR-215	ENST00000537551	HDGFL1	Q5TGJ6	251 aa		30.15	■■■□□ 2.42
CHFR-215	ENST00000537551	BCOR	Q6W2J9	1755 aa		30.15	■■■□□ 2.42
CHFR-215	ENST00000537551	ERVV-1	B6SEH8	477 aa		30.14	■■■□□ 2.42
CHFR-215	ENST00000537551	RGL2	O15211	777 aa		30.14	■■■□□ 2.42
CHFR-215	ENST00000537551	NIP7	Q9Y221	180 aa	Known RBP eCLIP	30.14	■■■□□ 2.42
CHFR-215	ENST00000537551	AFDN	P55196	1824 aa	Known RBP	30.14	■■■□□ 2.42
CHFR-215	ENST00000537551	MAP3K15	Q6ZN16	1313 aa		30.14	■■■□□ 2.42
CHFR-215	ENST00000537551	N4BP2	Q86UW6	1770 aa	Predicted RBP	30.13	■■■□□ 2.41
CHFR-215	ENST00000537551	PROSER3	Q2NL68	480 aa		30.13	■■■□□ 2.41
CHFR-215	ENST00000537551	ZBTB3	Q9H5J0	574 aa		30.13	■■■□□ 2.41
CHFR-215	ENST00000537551	ELL2	O00472	640 aa	Predicted RBP	30.12	■■■□□ 2.41
CHFR-215	ENST00000537551	CHRNA5	P30532	468 aa		30.12	■■■□□ 2.41
CHFR-215	ENST00000537551	BCS1L	Q9Y276	419 aa		30.12	■■■□□ 2.41
CHFR-215	ENST00000537551	PRR5L	Q6MZQ0	368 aa		30.11	■■■□□ 2.41
CHFR-215	ENST00000537551	NBPF5P	Q86XG9	351 aa	Predicted RBP	30.11	■■■□□ 2.41
CHFR-215	ENST00000537551	CCDC24	Q8N4L8	307 aa		30.11	■■■□□ 2.41
CHFR-215	ENST00000537551	CNBD1	Q8NA66	436 aa		30.11	■■■□□ 2.41
CHFR-215	ENST00000537551	DDX21	Q9NR30	783 aa	Known RBP eCLIP	30.11	■■■□□ 2.41
CHFR-215	ENST00000537551	PIM2	Q9P1W9	311 aa		30.11	■■■□□ 2.41
CHFR-215	ENST00000537551	KCNA3	P22001	575 aa		30.1	■■■□□ 2.41
CHFR-215	ENST00000537551	AIMP1	Q12904	312 aa	Known RBP	30.1	■■■□□ 2.41
CHFR-215	ENST00000537551	CHPF2	Q9P2E5	772 aa		30.1	■■■□□ 2.41
CHFR-215	ENST00000537551	NRXN2	Q9P2S2	1712 aa		30.1	■■■□□ 2.41
CHFR-215	ENST00000537551	ST5	P78524	1137 aa		30.09	■■■□□ 2.41
CHFR-215	ENST00000537551	COPS6	Q7L5N1	327 aa		30.09	■■■□□ 2.41
CHFR-215	ENST00000537551	LRP10	Q7Z4F1	713 aa		30.09	■■■□□ 2.41
CHFR-215	ENST00000537551	TSR2	Q969E8	191 aa	Known RBP	30.09	■■■□□ 2.41
CHFR-215	ENST00000537551	KIAA1551	Q9HCM1	1747 aa		30.08	■■■□□ 2.41
CHFR-215	ENST00000537551	IL16	Q14005	1332 aa		30.08	■■■□□ 2.41
CHFR-215	ENST00000537551	FAM177B	A6PVY3	158 aa		30.08	■■■□□ 2.41
CHFR-215	ENST00000537551	C8orf58	Q8NAV2	365 aa		30.08	■■■□□ 2.41
CHFR-215	ENST00000537551	CCER2	I3L3R5	266 aa		30.07	■■■□□ 2.4
CHFR-215	ENST00000537551	C2CD5	Q86YS7	1000 aa		30.07	■■■□□ 2.4
CHFR-215	ENST00000537551	WDR63	Q8IWG1	891 aa		30.07	■■■□□ 2.4
CHFR-215	ENST00000537551	XAGE3	Q8WTP9	111 aa		30.07	■■■□□ 2.4
CHFR-215	ENST00000537551	DBF4	Q9UBU7	674 aa	Predicted RBP	30.07	■■■□□ 2.4
CHFR-215	ENST00000537551		H0YIN7	160 aa		30.06	■■■□□ 2.4
CHFR-215	ENST00000537551	PDE6B	P35913	854 aa		30.06	■■■□□ 2.4
CHFR-215	ENST00000537551	DIEXF	Q68CQ4	756 aa	Known RBP	30.06	■■■□□ 2.4
CHFR-215	ENST00000537551	TPTE2	Q6XPS3	522 aa		30.06	■■■□□ 2.4
CHFR-215	ENST00000537551	BRIP1	Q9BX63	1249 aa		30.06	■■■□□ 2.4
CHFR-215	ENST00000537551	DALRD3	Q5D0E6	543 aa	Known RBP	30.05	■■■□□ 2.4
CHFR-215	ENST00000537551	GIGYF2	Q6Y7W6	1299 aa	Known RBP	30.05	■■■□□ 2.4
CHFR-215	ENST00000537551	GPT	P24298	496 aa		30.04	■■■□□ 2.4
CHFR-215	ENST00000537551	GTF2E1	P29083	439 aa	Predicted RBP	30.04	■■■□□ 2.4
CHFR-215	ENST00000537551	CHMP4A	Q9BY43	222 aa		30.03	■■■□□ 2.4
CHFR-215	ENST00000537551	HYPK	Q9NX55	129 aa		30.02	■■■□□ 2.4
CHFR-215	ENST00000537551	PDZRN3	Q9UPQ7	1066 aa		30.02	■■■□□ 2.4
CHFR-215	ENST00000537551	NUP98	P52948	1817 aa		30.01	■■■□□ 2.4
CHFR-215	ENST00000537551	UTRN	P46939	3433 aa		30.01	■■■□□ 2.39
CHFR-215	ENST00000537551	CHD4	Q14839	1912 aa		30.01	■■■□□ 2.39
CHFR-215	ENST00000537551	TSPYL6	Q8N831	410 aa		30.01	■■■□□ 2.39
CHFR-215	ENST00000537551	ATP10D	Q9P241	1426 aa		30	■■■□□ 2.39
CHFR-215	ENST00000537551	ZNF622	Q969S3	477 aa	Known RBP eCLIP	30	■■■□□ 2.39
CHFR-215	ENST00000537551	NYX	Q9GZU5	481 aa		30	■■■□□ 2.39
CHFR-215	ENST00000537551	GOLGB1	Q14789	3259 aa	Known RBP	29.99	■■■□□ 2.39
CHFR-215	ENST00000537551	CCDC30	Q5VVM6	783 aa		29.99	■■■□□ 2.39
CHFR-215	ENST00000537551	ARHGAP27	Q6ZUM4	889 aa		29.99	■■■□□ 2.39
CHFR-215	ENST00000537551	ZNF34	Q8IZ26	560 aa		29.99	■■■□□ 2.39
CHFR-215	ENST00000537551	HSP90AB3P	Q58FF7	597 aa		29.98	■■■□□ 2.39
CHFR-215	ENST00000537551	TTLL6	Q8N841	843 aa		29.98	■■■□□ 2.39
CHFR-215	ENST00000537551	TWISTNB	Q3B726	338 aa	Predicted RBP	29.97	■■■□□ 2.39
CHFR-215	ENST00000537551	ANKRD13D	Q6ZTN6	518 aa		29.97	■■■□□ 2.39
CHFR-215	ENST00000537551	UBN2	Q6ZU65	1347 aa		29.96	■■■□□ 2.39
CHFR-215	ENST00000537551	FANCI	Q9NVI1	1328 aa		29.96	■■■□□ 2.39
CHFR-215	ENST00000537551	BRCA1	P38398	1863 aa	Known RBP	29.96	■■■□□ 2.39
CHFR-215	ENST00000537551	SUSD4	Q5VX71	490 aa		29.96	■■■□□ 2.39
CHFR-215	ENST00000537551	GOLGA2	Q08379	1002 aa		29.95	■■■□□ 2.39
CHFR-215	ENST00000537551	PARP10	Q53GL7	1025 aa		29.95	■■■□□ 2.39
CHFR-215	ENST00000537551	PPP1R42	Q7Z4L9	355 aa		29.95	■■■□□ 2.39
CHFR-215	ENST00000537551	NUTM1	Q86Y26	1132 aa		29.95	■■■□□ 2.39
CHFR-215	ENST00000537551	PLBD2	Q8NHP8	589 aa		29.95	■■■□□ 2.39
CHFR-215	ENST00000537551	ANKRD31	Q8N7Z5	1873 aa		29.95	■■■□□ 2.38
CHFR-215	ENST00000537551	MYH16	Q9H6N6	1097 aa		29.94	■■■□□ 2.38
CHFR-215	ENST00000537551	TCIRG1	Q13488	830 aa		29.93	■■■□□ 2.38
CHFR-215	ENST00000537551	PHAX	Q9H814	394 aa	Known RBP	29.93	■■■□□ 2.38
CHFR-215	ENST00000537551	ERFE	Q4G0M1	354 aa		29.92	■■■□□ 2.38
CHFR-215	ENST00000537551	MIER1	Q8N108	512 aa		29.92	■■■□□ 2.38
CHFR-215	ENST00000537551	STK31	Q9BXU1	1019 aa		29.92	■■■□□ 2.38
CHFR-215	ENST00000537551	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.92	■■■□□ 2.38
CHFR-215	ENST00000537551	TCERG1	O14776	1098 aa	Known RBP	29.91	■■■□□ 2.38
CHFR-215	ENST00000537551	SRGN	P10124	158 aa		29.91	■■■□□ 2.38
CHFR-215	ENST00000537551	MASTL	Q96GX5	879 aa		29.91	■■■□□ 2.38
CHFR-215	ENST00000537551	UTP14A	Q9BVJ6	771 aa	Known RBP	29.91	■■■□□ 2.38
CHFR-215	ENST00000537551	EXOSC9	Q06265	439 aa	Known RBP	29.9	■■■□□ 2.38
CHFR-215	ENST00000537551	STYK1	Q6J9G0	422 aa		29.9	■■■□□ 2.38
CHFR-215	ENST00000537551	RIC3	Q7Z5B4	369 aa		29.9	■■■□□ 2.38
CHFR-215	ENST00000537551	CNKSR1	Q969H4	720 aa		29.9	■■■□□ 2.38
CHFR-215	ENST00000537551	IBTK	Q9P2D0	1353 aa	Predicted RBP	29.9	■■■□□ 2.38
CHFR-215	ENST00000537551	NTSR2	O95665	410 aa		29.89	■■■□□ 2.38
CHFR-215	ENST00000537551	DLEC1	Q9Y238	1755 aa		29.88	■■■□□ 2.37
CHFR-215	ENST00000537551	ARFGEF1	Q9Y6D6	1849 aa		29.88	■■■□□ 2.37
CHFR-215	ENST00000537551	NLRP10	Q86W26	655 aa		29.88	■■■□□ 2.37
CHFR-215	ENST00000537551	KLRG2	A4D1S0	409 aa	Predicted RBP	29.87	■■■□□ 2.37
CHFR-215	ENST00000537551	NPR1	P16066	1061 aa		29.87	■■■□□ 2.37
CHFR-215	ENST00000537551	ZNF219	Q9P2Y4	722 aa	Predicted RBP	29.87	■■■□□ 2.37
CHFR-215	ENST00000537551	ABCC12	Q96J65	1359 aa		29.87	■■■□□ 2.37
CHFR-215	ENST00000537551	DDX58	O95786	925 aa	Known RBP	29.86	■■■□□ 2.37
CHFR-215	ENST00000537551	ZNF521	Q96K83	1311 aa		29.86	■■■□□ 2.37

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms