RNA–Protein interactions for RNA: ENST00000535731.1

LRP6-202, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-202ENST00000535731 C7orf43Q8WVR3 580 aa26.42■■□□□ 1.82
LRP6-202ENST00000535731 CAMTA2O94983 1202 aa26.41■■□□□ 1.82
LRP6-202ENST00000535731 A1BGP04217 495 aa26.4■■□□□ 1.82
LRP6-202ENST00000535731 TEFQ10587 303 aa26.4■■□□□ 1.82
LRP6-202ENST00000535731 EAPPQ56P03 285 aaPredicted RBP26.4■■□□□ 1.82
LRP6-202ENST00000535731 CLEC11AQ9Y240 323 aa26.4■■□□□ 1.82
LRP6-202ENST00000535731 DIAPH1O60610 1272 aaKnown RBP26.39■■□□□ 1.82
LRP6-202ENST00000535731 SLC34A2O95436 690 aa26.39■■□□□ 1.82
LRP6-202ENST00000535731 DEFB115Q30KQ5 88 aa26.39■■□□□ 1.82
LRP6-202ENST00000535731 CCDC93Q567U6 631 aa26.39■■□□□ 1.82
LRP6-202ENST00000535731 HACL1Q9UJ83 578 aa26.39■■□□□ 1.82
LRP6-202ENST00000535731 SLX4Q8IY92 1834 aa26.39■■□□□ 1.81
LRP6-202ENST00000535731 AMER1Q5JTC6 1135 aaPredicted RBP26.38■■□□□ 1.81
LRP6-202ENST00000535731 IL17REQ8NFR9 667 aa26.38■■□□□ 1.81
LRP6-202ENST00000535731 UBR2Q8IWV8 1755 aa26.38■■□□□ 1.81
LRP6-202ENST00000535731 COL11A2P13942 1736 aaPredicted RBP26.37■■□□□ 1.81
LRP6-202ENST00000535731 RASSF10A6NK89 507 aa26.37■■□□□ 1.81
LRP6-202ENST00000535731 FKBP4Q02790 459 aaKnown RBP eCLIP26.37■■□□□ 1.81
LRP6-202ENST00000535731 FMNL2Q96PY5 1086 aa26.37■■□□□ 1.81
LRP6-202ENST00000535731 SCN4AP35499 1836 aa26.37■■□□□ 1.81
LRP6-202ENST00000535731 EPHX2P34913 555 aa26.36■■□□□ 1.81
LRP6-202ENST00000535731 PNMA8AQ86V59 439 aaPredicted RBP26.36■■□□□ 1.81
LRP6-202ENST00000535731 DZIP3Q86Y13 1208 aaKnown RBP26.36■■□□□ 1.81
LRP6-202ENST00000535731 GNAT3A8MTJ3 354 aa26.35■■□□□ 1.81
LRP6-202ENST00000535731 NPR1P16066 1061 aa26.35■■□□□ 1.81
LRP6-202ENST00000535731 MAP2K1Q02750 393 aaPredicted RBP26.35■■□□□ 1.81
LRP6-202ENST00000535731 CLEC4GQ6UXB4 293 aa26.35■■□□□ 1.81
LRP6-202ENST00000535731 CNTROBQ8N137 903 aa26.35■■□□□ 1.81
LRP6-202ENST00000535731 ABHD8Q96I13 439 aa26.35■■□□□ 1.81
LRP6-202ENST00000535731 HSPA8P11142 646 aaKnown RBP26.34■■□□□ 1.81
LRP6-202ENST00000535731 NBPF5PQ86XG9 351 aaPredicted RBP26.34■■□□□ 1.81
LRP6-202ENST00000535731 RTKN2Q8IZC4 609 aa26.34■■□□□ 1.81
LRP6-202ENST00000535731 ZNF277Q9NRM2 450 aaPredicted RBP26.34■■□□□ 1.81
LRP6-202ENST00000535731 ZNF541Q9H0D2 1346 aa26.34■■□□□ 1.81
LRP6-202ENST00000535731 VIRMAQ69YN4 1812 aaKnown RBP26.33■■□□□ 1.81
LRP6-202ENST00000535731 KLRG2A4D1S0 409 aaPredicted RBP26.33■■□□□ 1.81
LRP6-202ENST00000535731 SCN7AQ01118 1682 aa26.33■■□□□ 1.81
LRP6-202ENST00000535731 GAS2L2Q8NHY3 880 aa26.32■■□□□ 1.8
LRP6-202ENST00000535731 WDR33Q9C0J8 1336 aaKnown RBP26.32■■□□□ 1.8
LRP6-202ENST00000535731 MAP1SQ66K74 1059 aaPredicted RBP26.31■■□□□ 1.8
LRP6-202ENST00000535731 FZD9O00144 591 aa26.3■■□□□ 1.8
LRP6-202ENST00000535731 TPTE2Q6XPS3 522 aa26.3■■□□□ 1.8
LRP6-202ENST00000535731 FAM161AQ3B820 660 aa26.29■■□□□ 1.8
LRP6-202ENST00000535731 ZNF652Q9Y2D9 606 aa26.29■■□□□ 1.8
LRP6-202ENST00000535731 USP16Q9Y5T5 823 aa26.29■■□□□ 1.8
LRP6-202ENST00000535731 CLSPNQ9HAW4 1339 aa26.29■■□□□ 1.8
LRP6-202ENST00000535731 ALDH1B1P30837 517 aa26.28■■□□□ 1.8
LRP6-202ENST00000535731 GPC2Q8N158 579 aa26.28■■□□□ 1.8
LRP6-202ENST00000535731 SYNE4Q8N205 404 aa26.28■■□□□ 1.8
LRP6-202ENST00000535731 ABT1Q9ULW3 272 aaKnown RBP26.28■■□□□ 1.8
LRP6-202ENST00000535731 RNF123Q5XPI4 1314 aa26.28■■□□□ 1.8
LRP6-202ENST00000535731 BTBD11A6QL63 1104 aa26.27■■□□□ 1.8
LRP6-202ENST00000535731 KCNQ3O43525 872 aa26.27■■□□□ 1.8
LRP6-202ENST00000535731 IARSP41252 1262 aaKnown RBP26.27■■□□□ 1.8
LRP6-202ENST00000535731 OLFM4Q6UX06 510 aa26.27■■□□□ 1.8
LRP6-202ENST00000535731 ARFGEF2Q9Y6D5 1785 aa26.26■■□□□ 1.79
LRP6-202ENST00000535731 DDX21Q9NR30 783 aaKnown RBP eCLIP26.25■■□□□ 1.79
LRP6-202ENST00000535731 U2SURPO15042 1029 aaKnown RBP26.24■■□□□ 1.79
LRP6-202ENST00000535731 RGL2O15211 777 aa26.24■■□□□ 1.79
LRP6-202ENST00000535731 PIP4K2AP48426 406 aaPredicted RBP26.24■■□□□ 1.79
LRP6-202ENST00000535731 JDP2Q8WYK2 163 aa26.24■■□□□ 1.79
LRP6-202ENST00000535731 CACNA1SQ13698 1873 aa26.23■■□□□ 1.79
LRP6-202ENST00000535731 ADAMTSL1Q8N6G6 1762 aa26.23■■□□□ 1.79
LRP6-202ENST00000535731 CEMIPQ8WUJ3 1361 aa26.23■■□□□ 1.79
LRP6-202ENST00000535731 NIP7Q9Y221 180 aaKnown RBP eCLIP26.23■■□□□ 1.79
LRP6-202ENST00000535731 PSMD1Q99460 953 aa26.22■■□□□ 1.79
LRP6-202ENST00000535731 BEGAINQ9BUH8 593 aa26.22■■□□□ 1.79
LRP6-202ENST00000535731 PER1O15534 1290 aaPredicted RBP26.21■■□□□ 1.79
LRP6-202ENST00000535731 SNRPA1P09661 255 aaKnown RBP26.21■■□□□ 1.79
LRP6-202ENST00000535731 ECE1P42892 770 aa26.21■■□□□ 1.79
LRP6-202ENST00000535731 RGS19P49795 217 aa26.21■■□□□ 1.79
LRP6-202ENST00000535731 MLLT1Q03111 559 aaPredicted RBP26.21■■□□□ 1.79
LRP6-202ENST00000535731 CCDC85CA6NKD9 419 aa26.2■■□□□ 1.78
LRP6-202ENST00000535731 EIF6P56537 245 aaKnown RBP26.2■■□□□ 1.78
LRP6-202ENST00000535731 CC2D1BQ5T0F9 858 aaKnown RBP26.2■■□□□ 1.78
LRP6-202ENST00000535731 PRAMEF22A3QJZ6 481 aa26.19■■□□□ 1.78
LRP6-202ENST00000535731 FAM177BA6PVY3 158 aa26.19■■□□□ 1.78
LRP6-202ENST00000535731 LMOD1P29536 600 aaPredicted RBP26.19■■□□□ 1.78
LRP6-202ENST00000535731 CAPNS2Q96L46 248 aa26.19■■□□□ 1.78
LRP6-202ENST00000535731 GPR101Q96P66 508 aaPredicted RBP26.19■■□□□ 1.78
LRP6-202ENST00000535731 GTF2E1P29083 439 aaPredicted RBP26.18■■□□□ 1.78
LRP6-202ENST00000535731 CC2D2BQ6DHV5 1058 aa26.18■■□□□ 1.78
LRP6-202ENST00000535731 GJA3Q9Y6H8 435 aa26.18■■□□□ 1.78
LRP6-202ENST00000535731 SIPA1L3O60292 1781 aaPredicted RBP26.18■■□□□ 1.78
LRP6-202ENST00000535731 BCORQ6W2J9 1755 aa26.18■■□□□ 1.78
LRP6-202ENST00000535731 PAXIP1Q6ZW49 1069 aaPredicted RBP26.17■■□□□ 1.78
LRP6-202ENST00000535731 NBPF26B4DH59 902 aa26.15■■□□□ 1.78
LRP6-202ENST00000535731 FMR1Q06787 632 aaKnown RBP eCLIP26.15■■□□□ 1.78
LRP6-202ENST00000535731 CYP4F22Q6NT55 531 aa26.15■■□□□ 1.78
LRP6-202ENST00000535731 NBPF10Q6P3W6 841 aaKnown RBP26.15■■□□□ 1.78
LRP6-202ENST00000535731 NBPF15Q8N660 670 aa26.15■■□□□ 1.78
LRP6-202ENST00000535731 PHACTR3Q96KR7 559 aa26.15■■□□□ 1.78
LRP6-202ENST00000535731 EPS15P42566 896 aa26.14■■□□□ 1.78
LRP6-202ENST00000535731 GRIPAP1Q4V328 841 aa26.14■■□□□ 1.78
LRP6-202ENST00000535731 USP50Q70EL3 339 aaPredicted RBP26.14■■□□□ 1.78
LRP6-202ENST00000535731 MAP2K2P36507 400 aa26.13■■□□□ 1.77
LRP6-202ENST00000535731 HLFQ16534 295 aa26.13■■□□□ 1.77
LRP6-202ENST00000535731 CRY2Q49AN0 593 aa26.13■■□□□ 1.77
LRP6-202ENST00000535731 CST9Q5W186 159 aa26.13■■□□□ 1.77
LRP6-202ENST00000535731 KIF7Q2M1P5 1343 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms