RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 CEP57Q86XR8 500 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 ARFGAP3Q9NP61 516 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 SH2B1Q9NRF2 756 aaPredicted RBP8.83□□□□□ -1
CTNND1-223ENST00000529986 POLR3DP05423 398 aaPredicted RBP8.83□□□□□ -1
CTNND1-223ENST00000529986 UBE2HP62256 183 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 RAB11FIP4Q86YS3 637 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 FAM135AQ9P2D6 1515 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 PLEKHO1Q53GL0 409 aaPredicted RBP8.83□□□□□ -1
CTNND1-223ENST00000529986 CEP131Q9UPN4 1083 aa8.83□□□□□ -1
CTNND1-223ENST00000529986 RPRD2Q5VT52 1461 aaKnown RBP8.82□□□□□ -1
CTNND1-223ENST00000529986 USO1O60763 962 aaKnown RBP8.82□□□□□ -1
CTNND1-223ENST00000529986 USP5P45974 858 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 CCDC8Q9H0W5 538 aaPredicted RBP8.82□□□□□ -1
CTNND1-223ENST00000529986 SLC52A1Q9NWF4 448 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 TMCO5BA8MYB1 307 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 PRPF4BQ13523 1007 aaKnown RBP8.82□□□□□ -1
CTNND1-223ENST00000529986 MCM10Q7L590 875 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 USP48Q86UV5 1035 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 GTF3C6Q969F1 213 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 CEP63Q96MT8 703 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 NCOA1Q15788 1441 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 WASF1Q92558 559 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 KIF1BPQ96EK5 621 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 CCDC171Q6TFL3 1326 aa8.82□□□□□ -1
CTNND1-223ENST00000529986 GCOM1H8Y6P7 765 aaPredicted RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 GLRX3O76003 335 aaKnown RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 MYZAPP0CAP1 466 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 TRIM27P14373 513 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 ATRIPQ8WXE1 791 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 VPS18Q9P253 973 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 PDIA4P13667 645 aaKnown RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 TTC31Q49AM3 519 aaPredicted RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 NECAB1Q8N987 351 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 TMX3Q96JJ7 454 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 UBA5Q9GZZ9 404 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 PLEKHH1Q9ULM0 1364 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 NKTRP30414 1462 aaKnown RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 IVLP07476 585 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 HSPA4P34932 840 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 CCDC96Q2M329 555 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 DNAJC21Q5F1R6 531 aaKnown RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 DRC1Q96MC2 740 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 LRPPRCP42704 1394 aaKnown RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 MYO1BO43795 1136 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 HSF2BPO75031 334 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 DUSP27Q5VZP5 1158 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 ZSCAN25Q6NSZ9 544 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 ZNF530Q6P9A1 599 aaPredicted RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 CCDC144CPQ8IYA2 1237 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 CCDC150Q8NCX0 1101 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 CDK19Q9BWU1 502 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 DNAJC25Q9H1X3 360 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 U3KPZ7 1027 aaPredicted RBP8.81□□□□□ -1
CTNND1-223ENST00000529986 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
CTNND1-223ENST00000529986 SLU7O95391 586 aaKnown RBP8.8□□□□□ -1
CTNND1-223ENST00000529986 PTGS1P23219 599 aa8.8□□□□□ -1
CTNND1-223ENST00000529986 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -11e-10■■□□□ 14
CTNND1-223ENST00000529986 HYPKQ9NX55 129 aa8.8□□□□□ -1
CTNND1-223ENST00000529986 AIDAQ96BJ3 306 aa8.8□□□□□ -1
CTNND1-223ENST00000529986 GNL3LQ9NVN8 582 aaKnown RBP8.8□□□□□ -1
CTNND1-223ENST00000529986 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.8□□□□□ -1
CTNND1-223ENST00000529986 MTIF2P46199 727 aaKnown RBP8.8□□□□□ -1
CTNND1-223ENST00000529986 UBASH3AP57075 661 aa8.8□□□□□ -1
CTNND1-223ENST00000529986 NFE2L2Q16236 605 aa8.8□□□□□ -1
CTNND1-223ENST00000529986 SPECC1LQ69YQ0 1117 aa8.8□□□□□ -1
CTNND1-223ENST00000529986 GPRASP1Q5JY77 1395 aa8.8□□□□□ -1
CTNND1-223ENST00000529986 ZNF608Q9ULD9 1512 aaPredicted RBP8.8□□□□□ -1
CTNND1-223ENST00000529986 MINDY4BA8MYZ0 360 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 NOP2P46087 812 aaKnown RBP8.79□□□□□ -1
CTNND1-223ENST00000529986 TXNDC2Q86VQ3 553 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 CEP112Q8N8E3 955 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 MAPKBP1O60336 1514 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 ATAD2Q6PL18 1390 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 GOLGA8BA8MQT2 603 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 ZSCAN22P10073 491 aaPredicted RBP8.79□□□□□ -1
CTNND1-223ENST00000529986 C8orf34Q49A92 452 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 SCLT1Q96NL6 688 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 ALS2CR12Q96Q35 445 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 NAA15Q9BXJ9 866 aaKnown RBP8.79□□□□□ -1
CTNND1-223ENST00000529986 GOLGA6L9A6NEM1 432 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 BMP2KLQ5H9B9 411 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 LRP2BPQ9P2M1 347 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 CTAGE15A4D2H0 777 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 CTAGE8P0CG41 777 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 SPTY2D1Q68D10 685 aaPredicted RBP8.79□□□□□ -1
CTNND1-223ENST00000529986 GIGYF2Q6Y7W6 1299 aaKnown RBP8.79□□□□□ -1
CTNND1-223ENST00000529986 CTAGE6Q86UF2 777 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 CTAGE4Q8IX94 777 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 SMAP1Q8IYB5 467 aaPredicted RBP8.79□□□□□ -1
CTNND1-223ENST00000529986 AOPEPQ8N6M6 819 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 FBF1Q8TES7 1133 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 TCEANC2Q96MN5 208 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 MPHOSPH8Q99549 860 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 PUF60Q9UHX1 559 aaKnown RBP8.79□□□□□ -1
CTNND1-223ENST00000529986 ADGRL1O94910 1474 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 ZNF76P36508 570 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 ABCF2Q9UG63 623 aa8.79□□□□□ -1
CTNND1-223ENST00000529986 BTBD11A6QL63 1104 aa8.78□□□□□ -1
CTNND1-223ENST00000529986 FCHSD2O94868 740 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms