RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 CCDC180Q9P1Z9 1646 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 WASLO00401 505 aaPredicted RBP3.63□□□□□ -1.83
FDFT1-216ENST00000529521 DYRK3O43781 588 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 FLIIQ13045 1269 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 PPP2R2DQ66LE6 453 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 SDR16C5Q8N3Y7 309 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.63□□□□□ -1.83
FDFT1-216ENST00000529521 ANP32BQ92688 251 aaKnown RBP3.63□□□□□ -1.83
FDFT1-216ENST00000529521 EVI5LQ96CN4 794 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 MTA3Q9BTC8 594 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.63□□□□□ -1.83
FDFT1-216ENST00000529521 GPAMQ9HCL2 828 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 TPSG1Q9NRR2 321 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 HDAC5Q9UQL6 1122 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 RPS6KL1Q9Y6S9 549 aa3.63□□□□□ -1.83
FDFT1-216ENST00000529521 ZCCHC6Q5VYS8 1495 aaKnown RBP3.62□□□□□ -1.83
FDFT1-216ENST00000529521 A6NJR5 290 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 RRP9O43818 475 aaKnown RBP3.62□□□□□ -1.83
FDFT1-216ENST00000529521 BMP4P12644 408 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 CTBSQ01459 385 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 CALD1Q05682 793 aaKnown RBP3.62□□□□□ -1.83
FDFT1-216ENST00000529521 FOXD4Q12950 439 aaPredicted RBP3.62□□□□□ -1.83
FDFT1-216ENST00000529521 PRSS36Q5K4E3 855 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 CASC1Q6TDU7 716 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 TAS1R3Q7RTX0 852 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 DZIP3Q86Y13 1208 aaKnown RBP3.62□□□□□ -1.83
FDFT1-216ENST00000529521 RNF135Q8IUD6 432 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 CLUAP1Q96AJ1 413 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 TRIM11Q96F44 468 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 NLRP3Q96P20 1036 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 HIRIP3Q9BW71 556 aaPredicted RBP3.62□□□□□ -1.83
FDFT1-216ENST00000529521 PRDM4Q9UKN5 801 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 SH3BP1Q9Y3L3 701 aa3.62□□□□□ -1.83
FDFT1-216ENST00000529521 NEURL1BA8MQ27 555 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 NRDCO43847 1150 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 RFC5P40937 340 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 IRX3P78415 501 aaPredicted RBP3.61□□□□□ -1.83
FDFT1-216ENST00000529521 CLN3Q13286 438 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 CCDC96Q2M329 555 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 TMEM259Q4ZIN3 620 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 KRBA2Q6ZNG9 492 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 CHSY3Q70JA7 882 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 SEPT12Q8IYM1 358 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 MICAL1Q8TDZ2 1067 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 TRIM44Q96DX7 344 aaPredicted RBP3.61□□□□□ -1.83
FDFT1-216ENST00000529521 ABHD17AQ96GS6 310 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 DRC1Q96MC2 740 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 UBA5Q9GZZ9 404 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 NDFIP2Q9NV92 336 aa3.61□□□□□ -1.83
FDFT1-216ENST00000529521 ATXN7L1Q9ULK2 861 aaPredicted RBP3.61□□□□□ -1.83
FDFT1-216ENST00000529521 HMGB1P1B2RPK0 211 aaPredicted RBP3.6□□□□□ -1.83
FDFT1-216ENST00000529521 CCER2I3L3R5 266 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 BNIP3LO60238 219 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 PPFIA4O75335 1185 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 AP1G2O75843 785 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 MAP4K4O95819 1239 aaPredicted RBP3.6□□□□□ -1.83
FDFT1-216ENST00000529521 SPATA31C1P0DKV0 1188 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 ARAFP10398 606 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 FGFR3P22607 806 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 CALRP27797 417 aaKnown RBP3.6□□□□□ -1.83
FDFT1-216ENST00000529521 ERVK-9P63128 1117 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 LRP8Q14114 963 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 LONRF3Q496Y0 759 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 ZNF662Q6ZS27 426 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 EGFL6Q8IUX8 553 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 EPS8L1Q8TE68 723 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 MORC4Q8TE76 937 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 TSPAN18Q96SJ8 248 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 PLVAPQ9BX97 442 aa3.6□□□□□ -1.83
FDFT1-216ENST00000529521 ZNF777Q9ULD5 760 aaPredicted RBP3.6□□□□□ -1.83
FDFT1-216ENST00000529521 GOLIM4O00461 696 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 HYAL3O43820 417 aaPredicted RBP3.59□□□□□ -1.83
FDFT1-216ENST00000529521 RAB11FIP3O75154 756 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 ARID4AP29374 1257 aaPredicted RBP3.59□□□□□ -1.83
FDFT1-216ENST00000529521 PHKA2P46019 1235 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 LBRQ14739 615 aaKnown RBP3.59□□□□□ -1.83
FDFT1-216ENST00000529521 NBPF9Q3BBW0 867 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 FBXO31Q5XUX0 539 aaPredicted RBP3.59□□□□□ -1.83
FDFT1-216ENST00000529521 OTUD6BQ8N6M0 293 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 BANK1Q8NDB2 785 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 MKL1Q969V6 931 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 ZNF830Q96NB3 372 aaPredicted RBP3.59□□□□□ -1.83
FDFT1-216ENST00000529521 RUBCNLQ9H714 662 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 PRM3Q9NNZ6 103 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 KLF15Q9UIH9 416 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 SERPINA10Q9UK55 444 aa3.59□□□□□ -1.83
FDFT1-216ENST00000529521 A0A1B0GTH6 734 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 PEX14O75381 377 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 GIGYF1O75420 1035 aaPredicted RBP3.58□□□□□ -1.84
FDFT1-216ENST00000529521 APPP05067 770 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 SCTRP47872 440 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 SEMA3FQ13275 785 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 SETDB1Q15047 1291 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 ZFYVE27Q5T4F4 411 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 CLEC4GQ6UXB4 293 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 ARMCX6Q7L4S7 300 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 SMC5Q8IY18 1101 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 CACTIN-AS1Q8N1I8 211 aa3.58□□□□□ -1.84
FDFT1-216ENST00000529521 TRIM52Q96A61 297 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms