RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TBC1D12O60347 775 aa12.57□□□□□ -0.4
CTNNA1-221ENST00000520339 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
CTNNA1-221ENST00000520339 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
CTNNA1-221ENST00000520339 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
CTNNA1-221ENST00000520339 CNTNAP4Q9C0A0 1308 aa12.57□□□□□ -0.4
CTNNA1-221ENST00000520339 MAP2P11137 1827 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-221ENST00000520339 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
CTNNA1-221ENST00000520339 AKAP4Q5JQC9 854 aa12.56□□□□□ -0.4
CTNNA1-221ENST00000520339 CC2D1BQ5T0F9 858 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-221ENST00000520339 C4BP0C0L5 1744 aa12.55□□□□□ -0.4
CTNNA1-221ENST00000520339 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
CTNNA1-221ENST00000520339 MMP10P09238 476 aa12.55□□□□□ -0.4
CTNNA1-221ENST00000520339 NLGN1Q8N2Q7 840 aa12.55□□□□□ -0.4
CTNNA1-221ENST00000520339 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
CTNNA1-221ENST00000520339 DIAPH1O60610 1272 aaKnown RBP12.54□□□□□ -0.4
CTNNA1-221ENST00000520339 HMOX1P09601 288 aa12.54□□□□□ -0.4
CTNNA1-221ENST00000520339 DDX12PQ92771 950 aa12.54□□□□□ -0.4
CTNNA1-221ENST00000520339 LGR6Q9HBX8 967 aa12.54□□□□□ -0.4
CTNNA1-221ENST00000520339 NPC1L1Q9UHC9 1359 aa12.54□□□□□ -0.4
CTNNA1-221ENST00000520339 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-221ENST00000520339 EVI5O60447 810 aa12.53□□□□□ -0.4
CTNNA1-221ENST00000520339 GYS1P13807 737 aa12.53□□□□□ -0.4
CTNNA1-221ENST00000520339 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
CTNNA1-221ENST00000520339 SLC52A2Q9HAB3 445 aa12.53□□□□□ -0.4
CTNNA1-221ENST00000520339 C5P01031 1676 aa12.53□□□□□ -0.4
CTNNA1-221ENST00000520339 OSBPP22059 807 aa12.52□□□□□ -0.41
CTNNA1-221ENST00000520339 RFC4P35249 363 aa12.52□□□□□ -0.41
CTNNA1-221ENST00000520339 CRKLP46109 303 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-221ENST00000520339 C1QTNF8P60827 252 aa12.52□□□□□ -0.41
CTNNA1-221ENST00000520339 INTS5Q6P9B9 1019 aaKnown RBP12.52□□□□□ -0.41
CTNNA1-221ENST00000520339 ITGB4P16144 1822 aa12.51□□□□□ -0.41
CTNNA1-221ENST00000520339 TGFB2P61812 414 aa12.5□□□□□ -0.41
CTNNA1-221ENST00000520339 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
CTNNA1-221ENST00000520339 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
CTNNA1-221ENST00000520339 WWC3Q9ULE0 1092 aa12.5□□□□□ -0.41
CTNNA1-221ENST00000520339 GPR37O15354 613 aa12.49□□□□□ -0.41
CTNNA1-221ENST00000520339 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-221ENST00000520339 PTCD2Q8WV60 388 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-221ENST00000520339 SRP68Q9UHB9 627 aaKnown RBP12.49□□□□□ -0.41
CTNNA1-221ENST00000520339 TAF1LQ8IZX4 1826 aa12.48□□□□□ -0.41
CTNNA1-221ENST00000520339 A0A0G2JLW4 131 aa12.48□□□□□ -0.41
CTNNA1-221ENST00000520339 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-221ENST00000520339 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-221ENST00000520339 IFFO2Q5TF58 517 aa12.48□□□□□ -0.41
CTNNA1-221ENST00000520339 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
CTNNA1-221ENST00000520339 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
CTNNA1-221ENST00000520339 UBR3Q6ZT12 1888 aa12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 USP42Q9H9J4 1324 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 DPEP1P16444 411 aa12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 SP7Q8TDD2 431 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-221ENST00000520339 SOS1Q07889 1333 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-221ENST00000520339 TRIM66O15016 1216 aa12.46□□□□□ -0.41
CTNNA1-221ENST00000520339 TM4SF1P30408 202 aa12.46□□□□□ -0.41
CTNNA1-221ENST00000520339 DDR1Q08345 913 aa12.46□□□□□ -0.41
CTNNA1-221ENST00000520339 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
CTNNA1-221ENST00000520339 GPBP1L1Q9HC44 474 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-221ENST00000520339 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.42
CTNNA1-221ENST00000520339 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
CTNNA1-221ENST00000520339 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
CTNNA1-221ENST00000520339 ADCY9O60503 1353 aa12.45□□□□□ -0.42
CTNNA1-221ENST00000520339 KCNA3P22001 575 aa12.45□□□□□ -0.42
CTNNA1-221ENST00000520339 COL3A1P02461 1466 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-221ENST00000520339 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 SLC34A2O95436 690 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 USPL1Q5W0Q7 1092 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 PHACTR3Q96KR7 559 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 ZBTB1Q9Y2K1 713 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 MRC1P22897 1456 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 ZNF831Q5JPB2 1677 aa12.44□□□□□ -0.42
CTNNA1-221ENST00000520339 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
CTNNA1-221ENST00000520339 POLRMTO00411 1230 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-221ENST00000520339 ZPR1O75312 459 aa12.43□□□□□ -0.42
CTNNA1-221ENST00000520339 FCHSD2O94868 740 aa12.43□□□□□ -0.42
CTNNA1-221ENST00000520339 NARFQ9UHQ1 456 aa12.43□□□□□ -0.42
CTNNA1-221ENST00000520339 GOLGB1Q14789 3259 aaKnown RBP12.43□□□□□ -0.42
CTNNA1-221ENST00000520339 STARD3NLO95772 234 aa12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 PPP2R1AP30153 589 aa12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 PDE4DQ08499 809 aa12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 ZNF496Q96IT1 587 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 BCL2L12Q9HB09 334 aa12.42□□□□□ -0.42
CTNNA1-221ENST00000520339 CICQ96RK0 1608 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 CHD4Q14839 1912 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 TEFQ10587 303 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 NFIXQ14938 502 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 ARHGAP27Q6ZUM4 889 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 PIM2Q9P1W9 311 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 NUDCQ9Y266 331 aa12.41□□□□□ -0.42
CTNNA1-221ENST00000520339 CANXP27824 592 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms