RNA–Protein interactions for RNA: ENST00000520143.1

IGHV3-57-201, Transcript of immunoglobulin heavy variable 3-57 (pseudogene), humanhuman

BASIC

Gene IGHV3-57, Length 280 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-57-201ENST00000520143 CEP85Q6P2H3 762 aa8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 ZNF790Q6PG37 636 aa8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 SLC4A10Q6U841 1118 aa8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 NECTIN2Q92692 538 aa8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 MEIS3Q99687 375 aa8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 HYPKQ9NX55 129 aa8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 COL16A1Q07092 1604 aaPredicted RBP8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 PAPPAQ13219 1627 aa8.31□□□□□ -1.08
IGHV3-57-201ENST00000520143 ERVV-2B6SEH9 535 aa8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 CABP4P57796 275 aa8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 NFATC2IPQ8NCF5 419 aa8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 MS4A4AQ96JQ5 239 aa8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 IPO9Q96P70 1041 aaKnown RBP8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 PHAXQ9H814 394 aaKnown RBP8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 CHPF2Q9P2E5 772 aa8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
IGHV3-57-201ENST00000520143 ANKRD45Q5TZF3 282 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 LARP1Q6PKG0 1096 aaKnown RBP8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 KSR2Q6VAB6 950 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 TTC5Q8N0Z6 440 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 DNAAF4Q8WXU2 420 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 MFRPQ9BY79 579 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 LNPKQ9C0E8 428 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 SRCIN1Q9C0H9 1055 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 ITGB4P16144 1822 aa8.29□□□□□ -1.08
IGHV3-57-201ENST00000520143 GLI3P10071 1580 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 PI4KAP2A4QPH2 592 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 ALDH1L1O75891 902 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 SNRPA1P09661 255 aaKnown RBP8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 ATP8B2P98198 1209 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 BEND3Q5T5X7 828 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 PI4KAP1Q8N8J0 262 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 USP44Q9H0E7 712 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 STRN4Q9NRL3 753 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 BTG4Q9NY30 223 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 HDAC5Q9UQL6 1122 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 NRAPQ86VF7 1730 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 NWD2Q9ULI1 1742 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 TOGARAM1Q9Y4F4 1720 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 DISP2A7MBM2 1401 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 ERBB4Q15303 1308 aa8.28□□□□□ -1.08
IGHV3-57-201ENST00000520143 ADCY9O60503 1353 aa8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 TOM1O60784 492 aa8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 UBTFL1P0CB47 393 aaPredicted RBP8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 SLC39A6Q13433 755 aa8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 PDIA6Q15084 440 aa8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 BMP2KLQ5H9B9 411 aa8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 NPM2Q86SE8 214 aaKnown RBP8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 ZNF496Q96IT1 587 aaPredicted RBP8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 LRP6O75581 1613 aa8.27□□□□□ -1.09
IGHV3-57-201ENST00000520143 ANXA1P04083 346 aa8.26□□□□□ -1.09
IGHV3-57-201ENST00000520143 PROSER3Q2NL68 480 aa8.26□□□□□ -1.09
IGHV3-57-201ENST00000520143 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
IGHV3-57-201ENST00000520143 TMEM121BQ9BXQ6 578 aaPredicted RBP8.26□□□□□ -1.09
IGHV3-57-201ENST00000520143 UPF2Q9HAU5 1272 aaKnown RBP8.26□□□□□ -1.09
IGHV3-57-201ENST00000520143 AFDNP55196 1824 aaKnown RBP8.26□□□□□ -1.09
IGHV3-57-201ENST00000520143 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 KAT6BQ8WYB5 2073 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 KCPQ6ZWJ8 1503 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 PRAMEF22A3QJZ6 481 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 EIF5BO60841 1220 aaKnown RBP8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 MICALL2Q8IY33 904 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 LINS1Q8NG48 757 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 SSH3Q8TE77 659 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 FAM163AQ96GL9 167 aaPredicted RBP8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 MAP3K2Q9Y2U5 619 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 LRRFIP2Q9Y608 721 aaKnown RBP8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 TNS2Q63HR2 1409 aa8.25□□□□□ -1.09
IGHV3-57-201ENST00000520143 TUBGCP6Q96RT7 1819 aa8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 LRP10Q7Z4F1 713 aa8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 PLEKHM2Q8IWE5 1019 aa8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 DDX54Q8TDD1 881 aaKnown RBP8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 THRAP3Q9Y2W1 955 aaKnown RBP8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 NOP58Q9Y2X3 529 aaKnown RBP8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 USP16Q9Y5T5 823 aa8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 UTYO14607 1347 aa8.24□□□□□ -1.09
IGHV3-57-201ENST00000520143 NUP188Q5SRE5 1749 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 PNMA6EA0A0J9YXQ4 647 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 RAB11FIP3O75154 756 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 NEXNQ0ZGT2 675 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 MTX1Q13505 466 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 ERICH6Q7L0X2 663 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 RIC3Q7Z5B4 369 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 XAGE3Q8WTP9 111 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 METTL22Q9BUU2 404 aaPredicted RBP8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
IGHV3-57-201ENST00000520143 EXOC5O00471 708 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 NBPF7P0C2Y1 421 aaPredicted RBP8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 MYL6BP14649 208 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 HSP90AB4PQ58FF6 505 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 TTC22Q5TAA0 569 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 ANKRD13DQ6ZTN6 518 aa8.22□□□□□ -1.09
IGHV3-57-201ENST00000520143 COPS6Q7L5N1 327 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms