RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
HMGB1P46-201ENST00000520062 GPR182O15218 404 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 ZAP70P43403 619 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 SLC27A3Q5K4L6 730 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 ATCAYQ86WG3 371 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
HMGB1P46-201ENST00000520062 SPATA31C2B4DYI2 1134 aa8.6□□□□□ -1.03
HMGB1P46-201ENST00000520062 SPINT1O43278 529 aa8.6□□□□□ -1.03
HMGB1P46-201ENST00000520062 PRPF40AO75400 957 aaKnown RBP8.6□□□□□ -1.03
HMGB1P46-201ENST00000520062 RECKO95980 971 aa8.6□□□□□ -1.03
HMGB1P46-201ENST00000520062 RPLP1P05386 114 aaKnown RBP8.6□□□□□ -1.03
HMGB1P46-201ENST00000520062 PCSK2P16519 638 aa8.6□□□□□ -1.03
HMGB1P46-201ENST00000520062 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
HMGB1P46-201ENST00000520062 PDGFAP04085 211 aa8.59□□□□□ -1.03
HMGB1P46-201ENST00000520062 LDHBP07195 334 aaKnown RBP8.59□□□□□ -1.03
HMGB1P46-201ENST00000520062 TXLNAP40222 546 aa8.59□□□□□ -1.03
HMGB1P46-201ENST00000520062 PLA2G4AP47712 749 aa8.59□□□□□ -1.03
HMGB1P46-201ENST00000520062 ATP2B2Q01814 1243 aa8.59□□□□□ -1.03
HMGB1P46-201ENST00000520062 C4orf17Q53FE4 359 aa8.59□□□□□ -1.03
HMGB1P46-201ENST00000520062 EDEM1Q92611 657 aa8.59□□□□□ -1.03
HMGB1P46-201ENST00000520062 TNFRSF10AO00220 468 aa8.58□□□□□ -1.04
HMGB1P46-201ENST00000520062 UPP2O95045 317 aa8.58□□□□□ -1.04
HMGB1P46-201ENST00000520062 MAPK8P45983 427 aa8.58□□□□□ -1.04
HMGB1P46-201ENST00000520062 DNM1Q05193 864 aaKnown RBP8.58□□□□□ -1.04
HMGB1P46-201ENST00000520062 WDR44Q5JSH3 913 aa8.58□□□□□ -1.04
HMGB1P46-201ENST00000520062 IER5Q5VY09 327 aa8.58□□□□□ -1.04
HMGB1P46-201ENST00000520062 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
HMGB1P46-201ENST00000520062 TGFBR3LH3BV60 316 aa8.57□□□□□ -1.04
HMGB1P46-201ENST00000520062 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
HMGB1P46-201ENST00000520062 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
HMGB1P46-201ENST00000520062 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
HMGB1P46-201ENST00000520062 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
HMGB1P46-201ENST00000520062 HPS1Q92902 700 aa8.57□□□□□ -1.04
HMGB1P46-201ENST00000520062 INSM2Q96T92 566 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P46-201ENST00000520062 NEFLP07196 543 aa8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 TATP17735 454 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 XPCQ01831 940 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 ALG1LQ6GMV1 187 aa8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 TRIM67Q6ZTA4 783 aa8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 TMC4Q7Z404 712 aa8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 BCS1LQ9Y276 419 aa8.56□□□□□ -1.04
HMGB1P46-201ENST00000520062 MICAL2O94851 1124 aa8.55□□□□□ -1.04
HMGB1P46-201ENST00000520062 FBF1Q8TES7 1133 aa8.55□□□□□ -1.04
HMGB1P46-201ENST00000520062 NIF3L1Q9GZT8 377 aa8.55□□□□□ -1.04
HMGB1P46-201ENST00000520062 ANKIB1Q9P2G1 1089 aa8.55□□□□□ -1.04
HMGB1P46-201ENST00000520062 PARP2Q9UGN5 583 aa8.55□□□□□ -1.04
HMGB1P46-201ENST00000520062 CAPN5O15484 640 aaPredicted RBP8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 IGSF3O75054 1194 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 DAB2P98082 770 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 TSNAXIP1Q2TAA8 658 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 TTC16Q8NEE8 873 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 GPR152Q8TDT2 470 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 PIK3R5Q8WYR1 880 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 NUDT16Q96DE0 195 aaKnown RBP8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 SUSD3Q96L08 255 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 C8orf37Q96NL8 207 aa8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 DUSP9Q99956 384 aaKnown RBP8.54□□□□□ -1.04
HMGB1P46-201ENST00000520062 PNMA6FA0A0J9YX94 578 aa8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 CTSOP43234 321 aaPredicted RBP8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 NBPF10Q6P3W6 841 aaKnown RBP8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 AIDAQ96BJ3 306 aa8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 FRMD6Q96NE9 622 aa8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 DNAJC25Q9H1X3 360 aa8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 MRS2Q9HD23 443 aa8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 DMGDHQ9UI17 866 aaKnown RBP8.53□□□□□ -1.04
HMGB1P46-201ENST00000520062 SCAMP3O14828 347 aaKnown RBP8.52□□□□□ -1.05
HMGB1P46-201ENST00000520062 SORBS3O60504 671 aa8.52□□□□□ -1.05
HMGB1P46-201ENST00000520062 RNF217Q8TC41 542 aa8.52□□□□□ -1.05
HMGB1P46-201ENST00000520062 CSRNP1Q96S65 589 aa8.52□□□□□ -1.05
HMGB1P46-201ENST00000520062 A0A1B0GTH6 734 aa8.51□□□□□ -1.05
HMGB1P46-201ENST00000520062 OPLAHO14841 1288 aa8.51□□□□□ -1.05
HMGB1P46-201ENST00000520062 ATP4AP20648 1035 aa8.51□□□□□ -1.05
HMGB1P46-201ENST00000520062 PSMD2Q13200 908 aa8.51□□□□□ -1.05
HMGB1P46-201ENST00000520062 LYSMD3Q7Z3D4 306 aa8.51□□□□□ -1.05
HMGB1P46-201ENST00000520062 BMP2P12643 396 aa8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 GNA15P30679 374 aa8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 IDH3AP50213 366 aa8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 ARSDP51689 593 aa8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 MRPL14Q6P1L8 145 aaKnown RBP8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 XKR5Q6UX68 686 aa8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 GGNBP2Q9H3C7 697 aa8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 FNDC3AQ9Y2H6 1198 aaKnown RBP8.5□□□□□ -1.05
HMGB1P46-201ENST00000520062 EIF1AYO14602 144 aaKnown RBP8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 INPP5BP32019 993 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 PHKA2P46019 1235 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 POU4F2Q12837 409 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 C8orf34Q49A92 452 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 LDLRAD1Q5T700 205 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 BICDL1Q6ZP65 573 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 ZNF280CQ8ND82 737 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 CFHR5Q9BXR6 569 aa8.49□□□□□ -1.05
HMGB1P46-201ENST00000520062 PDE12Q6L8Q7 609 aaKnown RBP8.48□□□□□ -1.05
HMGB1P46-201ENST00000520062 PRICKLE2Q7Z3G6 844 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms