RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 HINFPQ9BQA5 517 aa6.16□□□□□ -1.42
RNU6-1088P-201ENST00000516850 TSPAN10Q9H1Z9 355 aaPredicted RBP6.16□□□□□ -1.42
RNU6-1088P-201ENST00000516850 AVENQ9NQS1 362 aaPredicted RBP6.16□□□□□ -1.42
RNU6-1088P-201ENST00000516850 MAFBQ9Y5Q3 323 aaPredicted RBP6.16□□□□□ -1.42
RNU6-1088P-201ENST00000516850 PPP1R12BO60237 982 aaPredicted RBP6.15□□□□□ -1.42
RNU6-1088P-201ENST00000516850 TSEN2Q8NCE0 465 aaKnown RBP6.15□□□□□ -1.42
RNU6-1088P-201ENST00000516850 GAS2L2Q8NHY3 880 aa6.15□□□□□ -1.42
RNU6-1088P-201ENST00000516850 PPP1R12CQ9BZL4 782 aa6.15□□□□□ -1.42
RNU6-1088P-201ENST00000516850 VRTNQ9H8Y1 702 aa6.15□□□□□ -1.42
RNU6-1088P-201ENST00000516850 HCN4Q9Y3Q4 1203 aa6.15□□□□□ -1.42
RNU6-1088P-201ENST00000516850 ATAD2Q6PL18 1390 aa6.15□□□□□ -1.43
RNU6-1088P-201ENST00000516850 EPXP11678 715 aa6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ALAS2P22557 587 aa6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 LMOD1P29536 600 aaPredicted RBP6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 SNRPNP63162 240 aaKnown RBP6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 NEUROD1Q13562 356 aa6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 HIF1AQ16665 826 aa6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 C1orf53Q5VUE5 145 aa6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 DCAF5Q96JK2 942 aa6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 BTBD6Q96KE9 485 aa6.14□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ALYREFQ86V81 257 aaKnown RBP6.13□□□□□ -1.43
RNU6-1088P-201ENST00000516850 SCG3Q8WXD2 468 aaKnown RBP6.13□□□□□ -1.43
RNU6-1088P-201ENST00000516850 CEP63Q96MT8 703 aa6.13□□□□□ -1.43
RNU6-1088P-201ENST00000516850 PHACTR1Q9C0D0 580 aa6.13□□□□□ -1.43
RNU6-1088P-201ENST00000516850 EFSO43281 561 aa6.12□□□□□ -1.43
RNU6-1088P-201ENST00000516850 HIRAP54198 1017 aaPredicted RBP6.12□□□□□ -1.43
RNU6-1088P-201ENST00000516850 PCBP4P57723 403 aaKnown RBP6.12□□□□□ -1.43
RNU6-1088P-201ENST00000516850 SH3PXD2AQ5TCZ1 1133 aa6.12□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ZNF468Q5VIY5 522 aaPredicted RBP6.12□□□□□ -1.43
RNU6-1088P-201ENST00000516850 CHSY3Q70JA7 882 aa6.12□□□□□ -1.43
RNU6-1088P-201ENST00000516850 GNB5O14775 395 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 MSTNO14793 375 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 DPYDQ12882 1025 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 GRIN2CQ14957 1233 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 PLA2G4EQ3MJ16 856 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 SYT9Q86SS6 491 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 STAG2Q8N3U4 1231 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 NGLY1Q96IV0 654 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 BRD7Q9NPI1 651 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 STRN4Q9NRL3 753 aa6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 NOP53Q9NZM5 478 aaKnown RBP6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ZNF777Q9ULD5 760 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1088P-201ENST00000516850 FAM196BA6NMK8 535 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L15C9J2P7 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L10C9JJH3 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L13C9JLJ4 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L12C9JPN9 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L11C9JVI0 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L21D6R901 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L18D6R9N7 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L22D6RA61 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L17D6RBQ6 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L19D6RCP7 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L20D6RJB6 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 USP17L24Q0WX57 530 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 PTK7Q13308 1070 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 CRTC2Q53ET0 693 aaPredicted RBP6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ANKMY2Q8IV38 441 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ALDH16A1Q8IZ83 802 aa6.1□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ELOA3CA0A087WX78 387 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ELOA3DA6NLF2 546 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 DKK1O94907 266 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 RFX1P22670 979 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ELOA3BQ3SY89 546 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 KANK4Q5T7N3 995 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 LINC00114Q6XXX2 140 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 FCHSD1Q86WN1 690 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 ELOA3Q8NG57 546 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 C7orf43Q8WVR3 580 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 VTI1AQ96AJ9 217 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 HSH2DQ96JZ2 352 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 SUSD3Q96L08 255 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 C2orf49Q9BVC5 232 aaPredicted RBP6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 KLF15Q9UIH9 416 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 KCNH4Q9UQ05 1017 aa6.09□□□□□ -1.43
RNU6-1088P-201ENST00000516850 C21orf2O43822 256 aa6.08□□□□□ -1.44
RNU6-1088P-201ENST00000516850 SIN3BO75182 1162 aa6.08□□□□□ -1.44
RNU6-1088P-201ENST00000516850 SPEM2Q0P670 501 aa6.08□□□□□ -1.44
RNU6-1088P-201ENST00000516850 POTEAQ6S8J7 498 aa6.08□□□□□ -1.44
RNU6-1088P-201ENST00000516850 FAM200AQ8TCP9 573 aa6.08□□□□□ -1.44
RNU6-1088P-201ENST00000516850 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.08□□□□□ -1.44
RNU6-1088P-201ENST00000516850 HCN2Q9UL51 889 aa6.08□□□□□ -1.44
RNU6-1088P-201ENST00000516850 SPDYE3A6NKU9 549 aa6.07□□□□□ -1.44
RNU6-1088P-201ENST00000516850 IGFBP4P22692 258 aa6.07□□□□□ -1.44
RNU6-1088P-201ENST00000516850 DGKGP49619 791 aa6.07□□□□□ -1.44
RNU6-1088P-201ENST00000516850 LGR5O75473 907 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 KCNQ4P56696 695 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 SUZ12Q15022 739 aaKnown RBP6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 RTN1Q16799 776 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 BTLAQ7Z6A9 289 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 ZNF280CQ8ND82 737 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 PNMA5Q96PV4 448 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 SLC30A3Q99726 388 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 SPOCK3Q9BQ16 436 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 SUV39H2Q9H5I1 410 aa6.06□□□□□ -1.44
RNU6-1088P-201ENST00000516850 KRBA1A5PL33 1030 aa6.05□□□□□ -1.44
RNU6-1088P-201ENST00000516850 ADARB2-AS1A8MUL3 147 aa6.05□□□□□ -1.44
RNU6-1088P-201ENST00000516850 EPB42P16452 691 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms