RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 MTHFSDQ2M296 383 aaKnown RBP7.36□□□□□ -1.23
KDM3B-204ENST00000507996 MCM10Q7L590 875 aa7.36□□□□□ -1.23
KDM3B-204ENST00000507996 CERKQ8TCT0 537 aa7.36□□□□□ -1.23
KDM3B-204ENST00000507996 SYAP1Q96A49 352 aaPredicted RBP7.36□□□□□ -1.23
KDM3B-204ENST00000507996 ALS2Q96Q42 1657 aa7.36□□□□□ -1.23
KDM3B-204ENST00000507996 RBM27Q9P2N5 1060 aaKnown RBP7.36□□□□□ -1.23
KDM3B-204ENST00000507996 USP25Q9UHP3 1055 aa7.36□□□□□ -1.23
KDM3B-204ENST00000507996 IGSF1Q8N6C5 1336 aa7.36□□□□□ -1.23
KDM3B-204ENST00000507996 TOM1L2Q6ZVM7 507 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 ZNF397Q8NF99 534 aaPredicted RBP7.35□□□□□ -1.23
KDM3B-204ENST00000507996 RTF1Q92541 710 aaKnown RBP7.35□□□□□ -1.23
KDM3B-204ENST00000507996 RTL1A6NKG5 1358 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 CCDC27Q2M243 656 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 WDR63Q8IWG1 891 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 CEP120Q8N960 986 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 ERBB3P21860 1342 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 KIF24Q5T7B8 1368 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 SLIT3O75094 1523 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 ELL2O00472 640 aaPredicted RBP7.35□□□□□ -1.23
KDM3B-204ENST00000507996 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 ZDHHC9Q9Y397 364 aa7.35□□□□□ -1.23
KDM3B-204ENST00000507996 FAM177BA6PVY3 158 aa7.34□□□□□ -1.23
KDM3B-204ENST00000507996 PRPF40AO75400 957 aaKnown RBP7.34□□□□□ -1.23
KDM3B-204ENST00000507996 MKRN4PQ13434 485 aaPredicted RBP7.34□□□□□ -1.23
KDM3B-204ENST00000507996 BTG4Q9NY30 223 aa7.34□□□□□ -1.23
KDM3B-204ENST00000507996 MIS18AQ9NYP9 233 aa7.34□□□□□ -1.23
KDM3B-204ENST00000507996 PAXBP1Q9Y5B6 917 aa7.34□□□□□ -1.23
KDM3B-204ENST00000507996 VASPP50552 380 aaPredicted RBP7.34□□□□□ -1.23
KDM3B-204ENST00000507996 BRPF1P55201 1214 aaPredicted RBP7.34□□□□□ -1.23
KDM3B-204ENST00000507996 RAPGEF4Q8WZA2 1011 aa7.34□□□□□ -1.23
KDM3B-204ENST00000507996 MYCBPQ99417 103 aaPredicted RBP7.34□□□□□ -1.23
KDM3B-204ENST00000507996 NCAPGQ9BPX3 1015 aa7.34□□□□□ -1.23
KDM3B-204ENST00000507996 BCL2L13Q9BXK5 485 aa7.34□□□□□ -1.23
KDM3B-204ENST00000507996 RGPD5Q99666 1765 aa7.34□□□□□ -1.24
KDM3B-204ENST00000507996 LMOD3Q0VAK6 560 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 KCNF1Q9H3M0 494 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 EXOSC9Q06265 439 aaKnown RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 RASSF4Q9H2L5 321 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 RGPD2P0DJD1 1756 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 DHX16O60231 1041 aaKnown RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 ADCY5O95622 1261 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 HNRNPH2P55795 449 aaKnown RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 ICE2Q659A1 982 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 ZNF530Q6P9A1 599 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 LARP1Q6PKG0 1096 aaKnown RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 TMEM87AQ8NBN3 555 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 TTC12Q9H892 705 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 NSFL1CQ9UNZ2 370 aaKnown RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 CCDC9Q9Y3X0 531 aaKnown RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 NHSL1Q5SYE7 1610 aa7.33□□□□□ -1.24
KDM3B-204ENST00000507996 PHRF1Q9P1Y6 1649 aaKnown RBP7.33□□□□□ -1.24
KDM3B-204ENST00000507996 USP54Q70EL1 1684 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 GUCY2CP25092 1073 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 RNF20Q5VTR2 975 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 MPRIPQ6WCQ1 1025 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 CERS3Q8IU89 383 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 DHX37Q8IY37 1157 aaKnown RBP7.32□□□□□ -1.24
KDM3B-204ENST00000507996 DDX19BQ9UMR2 479 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 PHLPP1O60346 1717 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 GNAT3A8MTJ3 354 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 KDM4AO75164 1064 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 TATP17735 454 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-204ENST00000507996 PLEKHO1Q53GL0 409 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-204ENST00000507996 C1orf141Q5JVX7 400 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 ZKSCAN2Q63HK3 967 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 ATG3Q9NT62 314 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 KDRP35968 1356 aa7.32□□□□□ -1.24
KDM3B-204ENST00000507996 TBC1D9Q6ZT07 1266 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 DZIP1LQ8IYY4 767 aaKnown RBP7.31□□□□□ -1.24
KDM3B-204ENST00000507996 PYCARDQ9ULZ3 195 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 CHD1LQ86WJ1 897 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 C17orf53Q8N3J3 647 aaPredicted RBP7.31□□□□□ -1.24
KDM3B-204ENST00000507996 TXLNBQ8N3L3 684 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 C8orf37Q96NL8 207 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 CARD10Q9BWT7 1032 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 SMC4Q9NTJ3 1288 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 TNNQ9UQP3 1299 aa7.31□□□□□ -1.24
KDM3B-204ENST00000507996 CPDO75976 1380 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 GOLGA6L6A8MZA4 724 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 BRD1O95696 1058 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 CASQ1P31415 396 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 GNAI1P63096 354 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 KMT5BQ4FZB7 885 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 RNF214Q8ND24 703 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 DDX54Q8TDD1 881 aaKnown RBP7.3□□□□□ -1.24
KDM3B-204ENST00000507996 LGR6Q9HBX8 967 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 MBIPQ9NS73 344 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 RSPH14Q9UHP6 348 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 KCNG1Q9UIX4 513 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 WDR17Q8IZU2 1322 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 HSPA1LP34931 641 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 GTF2A1P52655 376 aaPredicted RBP7.3□□□□□ -1.24
KDM3B-204ENST00000507996 RBM6P78332 1123 aaKnown RBP7.3□□□□□ -1.24
KDM3B-204ENST00000507996 PKP1Q13835 747 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 GRIPAP1Q4V328 841 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 IQUBQ8NA54 791 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 NFATC2IPQ8NCF5 419 aa7.3□□□□□ -1.24
KDM3B-204ENST00000507996 NOL10Q9BSC4 688 aaKnown RBP7.3□□□□□ -1.24
KDM3B-204ENST00000507996 RBM42Q9BTD8 480 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms