RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 CALD1Q05682 793 aaKnown RBP20.31■□□□□ 0.84
CLDND1-211ENST00000506575 PRR5LQ6MZQ0 368 aa20.31■□□□□ 0.84
CLDND1-211ENST00000506575 H0YIN7 160 aa20.3■□□□□ 0.84
CLDND1-211ENST00000506575 PDE6BP35913 854 aa20.3■□□□□ 0.84
CLDND1-211ENST00000506575 ARHGAP27Q6ZUM4 889 aa20.3■□□□□ 0.84
CLDND1-211ENST00000506575 NBPF5PQ86XG9 351 aaPredicted RBP20.3■□□□□ 0.84
CLDND1-211ENST00000506575 C2CD5Q86YS7 1000 aa20.3■□□□□ 0.84
CLDND1-211ENST00000506575 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
CLDND1-211ENST00000506575 NIP7Q9Y221 180 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLDND1-211ENST00000506575 DLEC1Q9Y238 1755 aa20.3■□□□□ 0.84
CLDND1-211ENST00000506575 BRIP1Q9BX63 1249 aa20.29■□□□□ 0.84
CLDND1-211ENST00000506575 PDZRN3Q9UPQ7 1066 aa20.29■□□□□ 0.84
CLDND1-211ENST00000506575 MAP3K15Q6ZN16 1313 aa20.28■□□□□ 0.84
CLDND1-211ENST00000506575 ANKRD31Q8N7Z5 1873 aa20.28■□□□□ 0.84
CLDND1-211ENST00000506575 NUP98P52948 1817 aa20.28■□□□□ 0.84
CLDND1-211ENST00000506575 ERVV-1B6SEH8 477 aa20.28■□□□□ 0.84
CLDND1-211ENST00000506575 HLFQ16534 295 aa20.28■□□□□ 0.84
CLDND1-211ENST00000506575 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
CLDND1-211ENST00000506575 NECTIN2Q92692 538 aa20.28■□□□□ 0.84
CLDND1-211ENST00000506575 GNAI1P63096 354 aa20.27■□□□□ 0.84
CLDND1-211ENST00000506575 TTLL7Q6ZT98 887 aa20.27■□□□□ 0.84
CLDND1-211ENST00000506575 TPTE2Q6XPS3 522 aa20.26■□□□□ 0.83
CLDND1-211ENST00000506575 TTLL6Q8N841 843 aa20.26■□□□□ 0.83
CLDND1-211ENST00000506575 ZBTB3Q9H5J0 574 aa20.26■□□□□ 0.83
CLDND1-211ENST00000506575 IFT57Q9NWB7 429 aa20.26■□□□□ 0.83
CLDND1-211ENST00000506575 FAM177BA6PVY3 158 aa20.25■□□□□ 0.83
CLDND1-211ENST00000506575 PDIA6Q15084 440 aa20.25■□□□□ 0.83
CLDND1-211ENST00000506575 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
CLDND1-211ENST00000506575 ZNF622Q969S3 477 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLDND1-211ENST00000506575 MBIPQ9NS73 344 aa20.25■□□□□ 0.83
CLDND1-211ENST00000506575 HOXB7P09629 217 aa20.24■□□□□ 0.83
CLDND1-211ENST00000506575 GTF2E1P29083 439 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-211ENST00000506575 ATP10DQ9P241 1426 aa20.24■□□□□ 0.83
CLDND1-211ENST00000506575 ANXA1P04083 346 aa20.23■□□□□ 0.83
CLDND1-211ENST00000506575 ZNF853P0CG23 659 aa20.23■□□□□ 0.83
CLDND1-211ENST00000506575 COL11A2P13942 1736 aaPredicted RBP20.23■□□□□ 0.83
CLDND1-211ENST00000506575 PROSER3Q2NL68 480 aa20.23■□□□□ 0.83
CLDND1-211ENST00000506575 HDGFL1Q5TGJ6 251 aa20.23■□□□□ 0.83
CLDND1-211ENST00000506575 GIGYF2Q6Y7W6 1299 aaKnown RBP20.22■□□□□ 0.83
CLDND1-211ENST00000506575 NYXQ9GZU5 481 aa20.22■□□□□ 0.83
CLDND1-211ENST00000506575 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLDND1-211ENST00000506575 ADCY9O60503 1353 aa20.21■□□□□ 0.83
CLDND1-211ENST00000506575 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
CLDND1-211ENST00000506575 GPTP24298 496 aa20.21■□□□□ 0.83
CLDND1-211ENST00000506575 AIMP1Q12904 312 aaKnown RBP20.21■□□□□ 0.83
CLDND1-211ENST00000506575 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
CLDND1-211ENST00000506575 LRP10Q7Z4F1 713 aa20.21■□□□□ 0.83
CLDND1-211ENST00000506575 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
CLDND1-211ENST00000506575 COPS6Q7L5N1 327 aa20.2■□□□□ 0.82
CLDND1-211ENST00000506575 XAGE3Q8WTP9 111 aa20.2■□□□□ 0.82
CLDND1-211ENST00000506575 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
CLDND1-211ENST00000506575 SRGNP10124 158 aa20.19■□□□□ 0.82
CLDND1-211ENST00000506575 STYK1Q6J9G0 422 aa20.19■□□□□ 0.82
CLDND1-211ENST00000506575 CNKSR1Q969H4 720 aa20.19■□□□□ 0.82
CLDND1-211ENST00000506575 MASTLQ96GX5 879 aa20.19■□□□□ 0.82
CLDND1-211ENST00000506575 DBF4Q9UBU7 674 aaPredicted RBP20.19■□□□□ 0.82
CLDND1-211ENST00000506575 CACNA1SQ13698 1873 aa20.19■□□□□ 0.82
CLDND1-211ENST00000506575 C9orf131Q5VYM1 1079 aa20.18■□□□□ 0.82
CLDND1-211ENST00000506575 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
CLDND1-211ENST00000506575 ZNF34Q8IZ26 560 aa20.18■□□□□ 0.82
CLDND1-211ENST00000506575 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
CLDND1-211ENST00000506575 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-211ENST00000506575 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
CLDND1-211ENST00000506575 ELL2O00472 640 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-211ENST00000506575 PARP10Q53GL7 1025 aa20.17■□□□□ 0.82
CLDND1-211ENST00000506575 HSP90AB3PQ58FF7 597 aa20.17■□□□□ 0.82
CLDND1-211ENST00000506575 PPP1R42Q7Z4L9 355 aa20.17■□□□□ 0.82
CLDND1-211ENST00000506575 ZNF219Q9P2Y4 722 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-211ENST00000506575 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
CLDND1-211ENST00000506575 IBTKQ9P2D0 1353 aaPredicted RBP20.17■□□□□ 0.82
CLDND1-211ENST00000506575 ANKRD36CQ5JPF3 1778 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 NPR1P16066 1061 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
CLDND1-211ENST00000506575 NUTM1Q86Y26 1132 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 RNF181Q9P0P0 153 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 ARFGEF2Q9Y6D5 1785 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 SBF1O95248 1867 aa20.16■□□□□ 0.82
CLDND1-211ENST00000506575 C21orf2O43822 256 aa20.15■□□□□ 0.82
CLDND1-211ENST00000506575 ERFEQ4G0M1 354 aa20.15■□□□□ 0.82
CLDND1-211ENST00000506575 SUSD4Q5VX71 490 aa20.15■□□□□ 0.82
CLDND1-211ENST00000506575 SLX4Q8IY92 1834 aa20.14■□□□□ 0.81
CLDND1-211ENST00000506575 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-211ENST00000506575 RASSF7Q02833 373 aa20.14■□□□□ 0.81
CLDND1-211ENST00000506575 PRPF40BQ6NWY9 871 aaKnown RBP20.14■□□□□ 0.81
CLDND1-211ENST00000506575 SALL2Q9Y467 1007 aaPredicted RBP20.14■□□□□ 0.81
CLDND1-211ENST00000506575 ABCC12Q96J65 1359 aa20.13■□□□□ 0.81
CLDND1-211ENST00000506575 IL16Q14005 1332 aa20.13■□□□□ 0.81
CLDND1-211ENST00000506575 NTSR2O95665 410 aa20.13■□□□□ 0.81
CLDND1-211ENST00000506575 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
CLDND1-211ENST00000506575 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
CLDND1-211ENST00000506575 TNRC6CQ9HCJ0 1690 aaKnown RBP20.13■□□□□ 0.81
CLDND1-211ENST00000506575 LMNB1P20700 586 aa20.12■□□□□ 0.81
CLDND1-211ENST00000506575 SOGA3Q5TF21 947 aa20.12■□□□□ 0.81
CLDND1-211ENST00000506575 ANKRD13DQ6ZTN6 518 aa20.12■□□□□ 0.81
CLDND1-211ENST00000506575 PLBD2Q8NHP8 589 aa20.12■□□□□ 0.81
CLDND1-211ENST00000506575 UTP14AQ9BVJ6 771 aaKnown RBP20.12■□□□□ 0.81
CLDND1-211ENST00000506575 CCDC88AQ3V6T2 1871 aa20.11■□□□□ 0.81
CLDND1-211ENST00000506575 RIC1Q4ADV7 1423 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms