RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CHMP5Q9NZZ3 219 aa21.15■□□□□ 0.98
TRAPPC11-204ENST00000505676 CIZ1Q9ULV3 898 aaPredicted RBP21.15■□□□□ 0.98
TRAPPC11-204ENST00000505676 LRP6O75581 1613 aa21.15■□□□□ 0.98
TRAPPC11-204ENST00000505676 IGKV5-2P06315 115 aa21.14■□□□□ 0.98
TRAPPC11-204ENST00000505676 OS9Q13438 667 aaPredicted RBP21.14■□□□□ 0.98
TRAPPC11-204ENST00000505676 DISP2A7MBM2 1401 aa21.13■□□□□ 0.97
TRAPPC11-204ENST00000505676 MCCP23508 829 aa21.13■□□□□ 0.97
TRAPPC11-204ENST00000505676 VSIG10Q8N0Z9 540 aa21.13■□□□□ 0.97
TRAPPC11-204ENST00000505676 GLRX3O76003 335 aaKnown RBP21.12■□□□□ 0.97
TRAPPC11-204ENST00000505676 SUCLG2Q96I99 432 aa21.12■□□□□ 0.97
TRAPPC11-204ENST00000505676 MYD88Q99836 296 aa21.12■□□□□ 0.97
TRAPPC11-204ENST00000505676 ARFGEF2Q9Y6D5 1785 aa21.12■□□□□ 0.97
TRAPPC11-204ENST00000505676 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC11-204ENST00000505676 K7ELQ4 463 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC11-204ENST00000505676 CNTROBQ8N137 903 aa21.11■□□□□ 0.97
TRAPPC11-204ENST00000505676 ESYT1Q9BSJ8 1104 aa21.11■□□□□ 0.97
TRAPPC11-204ENST00000505676 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
TRAPPC11-204ENST00000505676 TRIM6-TRIM34B2RNG4 842 aa21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 G3BP1Q13283 466 aaKnown RBP eCLIP21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 BICC1Q9H694 974 aaKnown RBP21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 IL1RAPL2Q9NP60 686 aa21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 BTG4Q9NY30 223 aa21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 TMOD3Q9NYL9 352 aa21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 CHMLP26374 656 aa21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 ANAPC15P60006 121 aa21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 PI4K2BQ8TCG2 481 aa21.1■□□□□ 0.97
TRAPPC11-204ENST00000505676 DDX54Q8TDD1 881 aaKnown RBP21.09■□□□□ 0.97
TRAPPC11-204ENST00000505676 IL17RAQ96F46 866 aa21.09■□□□□ 0.97
TRAPPC11-204ENST00000505676 BCL11AQ9H165 835 aa21.09■□□□□ 0.97
TRAPPC11-204ENST00000505676 ST18O60284 1047 aa21.08■□□□□ 0.97
TRAPPC11-204ENST00000505676 RABL6Q3YEC7 729 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC11-204ENST00000505676 KAZALD1Q96I82 304 aa21.08■□□□□ 0.97
TRAPPC11-204ENST00000505676 RILPL2Q969X0 211 aa21.08■□□□□ 0.96
TRAPPC11-204ENST00000505676 COL16A1Q07092 1604 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC11-204ENST00000505676 TOGARAM1Q9Y4F4 1720 aa21.07■□□□□ 0.96
TRAPPC11-204ENST00000505676 IFIT2P09913 472 aaKnown RBP21.07■□□□□ 0.96
TRAPPC11-204ENST00000505676 ECHDC1Q9NTX5 307 aa21.07■□□□□ 0.96
TRAPPC11-204ENST00000505676 NUTM1Q86Y26 1132 aa21.06■□□□□ 0.96
TRAPPC11-204ENST00000505676 COPRSQ9NQ92 184 aa21.06■□□□□ 0.96
TRAPPC11-204ENST00000505676 AFDNP55196 1824 aaKnown RBP21.06■□□□□ 0.96
TRAPPC11-204ENST00000505676 THRAP3Q9Y2W1 955 aaKnown RBP21.06■□□□□ 0.96
TRAPPC11-204ENST00000505676 NUP188Q5SRE5 1749 aa21.05■□□□□ 0.96
TRAPPC11-204ENST00000505676 DDIT3P35638 169 aa21.05■□□□□ 0.96
TRAPPC11-204ENST00000505676 MCM2P49736 904 aa21.05■□□□□ 0.96
TRAPPC11-204ENST00000505676 WNK3Q9BYP7 1800 aa21.05■□□□□ 0.96
TRAPPC11-204ENST00000505676 NBPF26B4DH59 902 aa21.04■□□□□ 0.96
TRAPPC11-204ENST00000505676 NBPF14Q5TI25 921 aa21.04■□□□□ 0.96
TRAPPC11-204ENST00000505676 NBPF10Q6P3W6 841 aaKnown RBP21.04■□□□□ 0.96
TRAPPC11-204ENST00000505676 NBPF15Q8N660 670 aa21.04■□□□□ 0.96
TRAPPC11-204ENST00000505676 CCDC191Q8NCU4 936 aa21.04■□□□□ 0.96
TRAPPC11-204ENST00000505676 RUFY2Q8WXA3 655 aa21.04■□□□□ 0.96
TRAPPC11-204ENST00000505676 HIP1O00291 1037 aa21.04■□□□□ 0.96
TRAPPC11-204ENST00000505676 HSP90AA1P07900 732 aaKnown RBP21.03■□□□□ 0.96
TRAPPC11-204ENST00000505676 TSHZ3Q63HK5 1081 aa21.03■□□□□ 0.96
TRAPPC11-204ENST00000505676 CWC25Q9NXE8 425 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC11-204ENST00000505676 AK9Q5TCS8 1911 aa21.03■□□□□ 0.96
TRAPPC11-204ENST00000505676 A0A087WZG4 1122 aa21.02■□□□□ 0.96
TRAPPC11-204ENST00000505676 H7C1W4 665 aa21.02■□□□□ 0.96
TRAPPC11-204ENST00000505676 STARD3NLO95772 234 aa21.02■□□□□ 0.96
TRAPPC11-204ENST00000505676 CASP7P55210 303 aa21.01■□□□□ 0.95
TRAPPC11-204ENST00000505676 EVI5LQ96CN4 794 aa21.01■□□□□ 0.95
TRAPPC11-204ENST00000505676 EXOC5O00471 708 aa21.01■□□□□ 0.95
TRAPPC11-204ENST00000505676 FRAT2O75474 233 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC11-204ENST00000505676 PTMSP20962 102 aa21■□□□□ 0.95
TRAPPC11-204ENST00000505676 AACSQ86V21 672 aa21■□□□□ 0.95
TRAPPC11-204ENST00000505676 PA2G4Q9UQ80 394 aaKnown RBP21■□□□□ 0.95
TRAPPC11-204ENST00000505676 BCL9O00512 1426 aa21■□□□□ 0.95
TRAPPC11-204ENST00000505676 PHLPP1O60346 1717 aa21■□□□□ 0.95
TRAPPC11-204ENST00000505676 DEKP35659 375 aaKnown RBP21■□□□□ 0.95
TRAPPC11-204ENST00000505676 TRIM28Q13263 835 aaKnown RBP21■□□□□ 0.95
TRAPPC11-204ENST00000505676 UBE3BQ7Z3V4 1068 aa21■□□□□ 0.95
TRAPPC11-204ENST00000505676 SGSM2O43147 1006 aa20.99■□□□□ 0.95
TRAPPC11-204ENST00000505676 PTCD1O75127 700 aaKnown RBP20.99■□□□□ 0.95
TRAPPC11-204ENST00000505676 SASH1O94885 1247 aa20.99■□□□□ 0.95
TRAPPC11-204ENST00000505676 TICAM2Q86XR7 235 aa20.99■□□□□ 0.95
TRAPPC11-204ENST00000505676 ANO2Q9NQ90 1003 aa20.99■□□□□ 0.95
TRAPPC11-204ENST00000505676 ATG3Q9NT62 314 aa20.99■□□□□ 0.95
TRAPPC11-204ENST00000505676 UNC5CLQ8IV45 518 aa20.98■□□□□ 0.95
TRAPPC11-204ENST00000505676 PIGBQ92521 554 aa20.98■□□□□ 0.95
TRAPPC11-204ENST00000505676 CWC22Q9HCG8 908 aaKnown RBP20.98■□□□□ 0.95
TRAPPC11-204ENST00000505676 RFX5P48382 616 aaPredicted RBP20.98■□□□□ 0.95
TRAPPC11-204ENST00000505676 KIF6Q6ZMV9 814 aa20.97■□□□□ 0.95
TRAPPC11-204ENST00000505676 RAD50Q92878 1312 aa20.97■□□□□ 0.95
TRAPPC11-204ENST00000505676 NRAPQ86VF7 1730 aa20.97■□□□□ 0.95
TRAPPC11-204ENST00000505676 ITGB4P16144 1822 aa20.97■□□□□ 0.95
TRAPPC11-204ENST00000505676 A1BGP04217 495 aa20.97■□□□□ 0.95
TRAPPC11-204ENST00000505676 KIAA1211Q6ZU35 1233 aa20.97■□□□□ 0.95
TRAPPC11-204ENST00000505676 NWD2Q9ULI1 1742 aa20.97■□□□□ 0.95
TRAPPC11-204ENST00000505676 RFX7Q2KHR2 1363 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 DDX11L8A8MPP1 907 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 RBM42Q9BTD8 480 aaKnown RBP20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 DIAPH3Q9NSV4 1193 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 PTPN12Q05209 780 aaKnown RBP20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 HSP90AB3PQ58FF7 597 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 EPHA10Q5JZY3 1008 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 TTLL7Q6ZT98 887 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 ISCA1Q9BUE6 129 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 FBXO3Q9UK99 471 aa20.96■□□□□ 0.95
TRAPPC11-204ENST00000505676 TOM1O60784 492 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms