RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
HOXC9-202ENST00000504557 C2CD5Q86YS7 1000 aa18.62■□□□□ 0.57
HOXC9-202ENST00000504557 COL11A2P13942 1736 aaPredicted RBP18.61■□□□□ 0.57
HOXC9-202ENST00000504557 ANXA1P04083 346 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 HLFQ16534 295 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 DALRD3Q5D0E6 543 aaKnown RBP18.61■□□□□ 0.57
HOXC9-202ENST00000504557 PRR5LQ6MZQ0 368 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
HOXC9-202ENST00000504557 NIP7Q9Y221 180 aaKnown RBP eCLIP18.61■□□□□ 0.57
HOXC9-202ENST00000504557 TTLL7Q6ZT98 887 aa18.6■□□□□ 0.57
HOXC9-202ENST00000504557 NBPF5PQ86XG9 351 aaPredicted RBP18.6■□□□□ 0.57
HOXC9-202ENST00000504557 ZNF526Q8TF50 670 aaPredicted RBP18.6■□□□□ 0.57
HOXC9-202ENST00000504557 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
HOXC9-202ENST00000504557 CHL1O00533 1208 aa18.59■□□□□ 0.57
HOXC9-202ENST00000504557 ZNF622Q969S3 477 aaKnown RBP eCLIP18.59■□□□□ 0.57
HOXC9-202ENST00000504557 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
HOXC9-202ENST00000504557 CCDC88AQ3V6T2 1871 aa18.58■□□□□ 0.57
HOXC9-202ENST00000504557 H0YIN7 160 aa18.58■□□□□ 0.56
HOXC9-202ENST00000504557 ST5P78524 1137 aa18.58■□□□□ 0.56
HOXC9-202ENST00000504557 PROSER3Q2NL68 480 aa18.58■□□□□ 0.56
HOXC9-202ENST00000504557 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
HOXC9-202ENST00000504557 CLEC4GQ6UXB4 293 aa18.57■□□□□ 0.56
HOXC9-202ENST00000504557 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 GPTP24298 496 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 AIMP1Q12904 312 aaKnown RBP18.56■□□□□ 0.56
HOXC9-202ENST00000504557 MBIPQ9NS73 344 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 SALL2Q9Y467 1007 aaPredicted RBP18.56■□□□□ 0.56
HOXC9-202ENST00000504557 SBF1O95248 1867 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 ATP10DQ9P241 1426 aa18.56■□□□□ 0.56
HOXC9-202ENST00000504557 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
HOXC9-202ENST00000504557 PDE6BP35913 854 aa18.55■□□□□ 0.56
HOXC9-202ENST00000504557 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
HOXC9-202ENST00000504557 BRIP1Q9BX63 1249 aa18.55■□□□□ 0.56
HOXC9-202ENST00000504557 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
HOXC9-202ENST00000504557 HDGFL1Q5TGJ6 251 aa18.54■□□□□ 0.56
HOXC9-202ENST00000504557 TTLL6Q8N841 843 aa18.54■□□□□ 0.56
HOXC9-202ENST00000504557 SLX4Q8IY92 1834 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 ERBB4Q15303 1308 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 ANKRD36CQ5JPF3 1778 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 PDIA6Q15084 440 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 TPTE2Q6XPS3 522 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
HOXC9-202ENST00000504557 ERVV-1B6SEH8 477 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 GNAI1P63096 354 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 RASSF7Q02833 373 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.56
HOXC9-202ENST00000504557 DUSP27Q5VZP5 1158 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 NUTM1Q86Y26 1132 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 XAGE3Q8WTP9 111 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 ZNF428Q96B54 188 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.56
HOXC9-202ENST00000504557 TNRC6CQ9HCJ0 1690 aaKnown RBP18.51■□□□□ 0.55
HOXC9-202ENST00000504557 COPS6Q7L5N1 327 aa18.51■□□□□ 0.55
HOXC9-202ENST00000504557 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
HOXC9-202ENST00000504557 C9orf131Q5VYM1 1079 aa18.5■□□□□ 0.55
HOXC9-202ENST00000504557 GPBP1L1Q9HC44 474 aaPredicted RBP18.5■□□□□ 0.55
HOXC9-202ENST00000504557 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 C21orf2O43822 256 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
HOXC9-202ENST00000504557 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
HOXC9-202ENST00000504557 DDX21Q9NR30 783 aaKnown RBP eCLIP18.49■□□□□ 0.55
HOXC9-202ENST00000504557 RNF181Q9P0P0 153 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 ADCY9O60503 1353 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 ARFGEF2Q9Y6D5 1785 aa18.49■□□□□ 0.55
HOXC9-202ENST00000504557 ABCC12Q96J65 1359 aa18.48■□□□□ 0.55
HOXC9-202ENST00000504557 ZNF853P0CG23 659 aa18.48■□□□□ 0.55
HOXC9-202ENST00000504557 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
HOXC9-202ENST00000504557 RGL2O15211 777 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 SRGNP10124 158 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 SUSD4Q5VX71 490 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 MASTLQ96GX5 879 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 NYXQ9GZU5 481 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 PDZRN3Q9UPQ7 1066 aa18.47■□□□□ 0.55
HOXC9-202ENST00000504557 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 PRPF40BQ6NWY9 871 aaKnown RBP18.46■□□□□ 0.55
HOXC9-202ENST00000504557 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 CNKSR1Q969H4 720 aa18.46■□□□□ 0.55
HOXC9-202ENST00000504557 DBF4Q9UBU7 674 aaPredicted RBP18.46■□□□□ 0.55
HOXC9-202ENST00000504557 HOXB7P09629 217 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 STYK1Q6J9G0 422 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 ZNF34Q8IZ26 560 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 TIAM2Q8IVF5 1701 aa18.45■□□□□ 0.54
HOXC9-202ENST00000504557 TCERG1O14776 1098 aaKnown RBP18.44■□□□□ 0.54
HOXC9-202ENST00000504557 NPR1P16066 1061 aa18.44■□□□□ 0.54
HOXC9-202ENST00000504557 PPP1R42Q7Z4L9 355 aa18.44■□□□□ 0.54
HOXC9-202ENST00000504557 LAMB2P55268 1798 aa18.43■□□□□ 0.54
HOXC9-202ENST00000504557 TSPYL6Q8N831 410 aa18.43■□□□□ 0.54
HOXC9-202ENST00000504557 NTSR2O95665 410 aa18.42■□□□□ 0.54
HOXC9-202ENST00000504557 PARP10Q53GL7 1025 aa18.42■□□□□ 0.54
HOXC9-202ENST00000504557 RPGRQ92834 1020 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 UTP14AQ9BVJ6 771 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 HYPKQ9NX55 129 aa18.42■□□□□ 0.54
HOXC9-202ENST00000504557 DICER1Q9UPY3 1922 aaKnown RBP18.42■□□□□ 0.54
HOXC9-202ENST00000504557 NFKBIEO00221 500 aa18.41■□□□□ 0.54
HOXC9-202ENST00000504557 CCDC27Q2M243 656 aa18.41■□□□□ 0.54
HOXC9-202ENST00000504557 HSP90AB3PQ58FF7 597 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms