RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 PLCB2Q00722 1185 aa13.65□□□□□ -0.22
PAPD4-207ENST00000504233 DBF4Q9UBU7 674 aaPredicted RBP13.65□□□□□ -0.22
PAPD4-207ENST00000504233 ARHGEF25Q86VW2 580 aa13.64□□□□□ -0.23
PAPD4-207ENST00000504233 RASEFQ8IZ41 740 aa13.64□□□□□ -0.23
PAPD4-207ENST00000504233 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
PAPD4-207ENST00000504233 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
PAPD4-207ENST00000504233 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
PAPD4-207ENST00000504233 PIP4K2AP48426 406 aaPredicted RBP13.64□□□□□ -0.23
PAPD4-207ENST00000504233 RBSNQ9H1K0 784 aa13.64□□□□□ -0.23
PAPD4-207ENST00000504233 TMEM63CQ9P1W3 806 aa13.64□□□□□ -0.23
PAPD4-207ENST00000504233 SYCE3A1L190 88 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 HSPA4P34932 840 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 CNTROBQ8N137 903 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 SIL1Q9H173 461 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.63□□□□□ -0.23
PAPD4-207ENST00000504233 SGSM2O43147 1006 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 MYL6BP14649 208 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 ANAPC15P60006 121 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 CUL4AQ13619 759 aa13.63□□□□□ -0.23
PAPD4-207ENST00000504233 MCM2P49736 904 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 SNX14Q9Y5W7 946 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 ADGRL3Q9HAR2 1447 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 BRD1O95696 1058 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 CLASRPQ8N2M8 674 aaKnown RBP13.62□□□□□ -0.23
PAPD4-207ENST00000504233 DIAPH3Q9NSV4 1193 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 AOX1Q06278 1338 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 HOXB7P09629 217 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 KLHDC4Q8TBB5 520 aa13.62□□□□□ -0.23
PAPD4-207ENST00000504233 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
PAPD4-207ENST00000504233 RAD50Q92878 1312 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 ZNF445P59923 1031 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 FGD1P98174 961 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 AMOTQ4VCS5 1084 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 AACSQ86V21 672 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 SUCLG2Q96I99 432 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 LSG1Q9H089 658 aaKnown RBP13.61□□□□□ -0.23
PAPD4-207ENST00000504233 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
PAPD4-207ENST00000504233 KSR2Q6VAB6 950 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 CCDC8Q9H0W5 538 aaPredicted RBP13.61□□□□□ -0.23
PAPD4-207ENST00000504233 NLRP2Q9NX02 1062 aa13.61□□□□□ -0.23
PAPD4-207ENST00000504233 TPM2P07951 284 aa13.6□□□□□ -0.23
PAPD4-207ENST00000504233 AK2P54819 239 aa13.6□□□□□ -0.23
PAPD4-207ENST00000504233 PTH1RQ03431 593 aa13.6□□□□□ -0.23
PAPD4-207ENST00000504233 GADD45BO75293 160 aaPredicted RBP13.6□□□□□ -0.23
PAPD4-207ENST00000504233 PTMAP06454 111 aaKnown RBP13.6□□□□□ -0.23
PAPD4-207ENST00000504233 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
PAPD4-207ENST00000504233 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
PAPD4-207ENST00000504233 CASTP20810 708 aaKnown RBP13.59□□□□□ -0.23
PAPD4-207ENST00000504233 PDE4CQ08493 712 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 PROSER2Q86WR7 435 aaPredicted RBP13.59□□□□□ -0.23
PAPD4-207ENST00000504233 KDM3BQ7LBC6 1761 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
PAPD4-207ENST00000504233 CCDC173Q0VFZ6 552 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 HSP90AB4PQ58FF6 505 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 PRPF40BQ6NWY9 871 aaKnown RBP13.59□□□□□ -0.23
PAPD4-207ENST00000504233 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 TLR7Q9NYK1 1049 aaKnown RBP13.59□□□□□ -0.23
PAPD4-207ENST00000504233 LARGE1O95461 756 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 RIC3Q7Z5B4 369 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
PAPD4-207ENST00000504233 GRM8O00222 908 aa13.58□□□□□ -0.24
PAPD4-207ENST00000504233 ADCK5Q3MIX3 580 aa13.58□□□□□ -0.24
PAPD4-207ENST00000504233 RUFY3Q7L099 469 aa13.58□□□□□ -0.24
PAPD4-207ENST00000504233 KAZALD1Q96I82 304 aa13.58□□□□□ -0.24
PAPD4-207ENST00000504233 ECHDC1Q9NTX5 307 aa13.58□□□□□ -0.24
PAPD4-207ENST00000504233 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.24
PAPD4-207ENST00000504233 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
PAPD4-207ENST00000504233 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.24
PAPD4-207ENST00000504233 FAM227BQ96M60 508 aa13.57□□□□□ -0.24
PAPD4-207ENST00000504233 JAKMIP1Q96N16 626 aaKnown RBP13.57□□□□□ -0.24
PAPD4-207ENST00000504233 ALDH1L1O75891 902 aa13.57□□□□□ -0.24
PAPD4-207ENST00000504233 COL9A3Q14050 684 aaPredicted RBP13.57□□□□□ -0.24
PAPD4-207ENST00000504233 CHRNA2Q15822 529 aa13.57□□□□□ -0.24
PAPD4-207ENST00000504233 EAF2Q96CJ1 260 aaPredicted RBP13.57□□□□□ -0.24
PAPD4-207ENST00000504233 BOLA2Q9H3K6 86 aa13.57□□□□□ -0.24
PAPD4-207ENST00000504233 SASH1O94885 1247 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 CSB-PGBD3P0DP91 1061 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 KCNJ4P48050 445 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.24
PAPD4-207ENST00000504233 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 LINS1Q8NG48 757 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 TTC14Q96N46 770 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 CCDC9Q9Y3X0 531 aaKnown RBP13.56□□□□□ -0.24
PAPD4-207ENST00000504233 MTX1Q13505 466 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 PDIA6Q15084 440 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 EDC3Q96F86 508 aaKnown RBP13.56□□□□□ -0.24
PAPD4-207ENST00000504233 TCEANC2Q96MN5 208 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 MYD88Q99836 296 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 CHMP4AQ9BY43 222 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
PAPD4-207ENST00000504233 CNPY2Q9Y2B0 182 aa13.56□□□□□ -0.24
PAPD4-207ENST00000504233 LMO7Q8WWI1 1683 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms