RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 COL15A1P39059 1388 aa13.42□□□□□ -0.26
SRSF4-205ENST00000497015 DICER1Q9UPY3 1922 aaKnown RBP13.41□□□□□ -0.26
SRSF4-205ENST00000497015 PRR5LQ6MZQ0 368 aa13.41□□□□□ -0.26
SRSF4-205ENST00000497015 C7orf43Q8WVR3 580 aa13.41□□□□□ -0.26
SRSF4-205ENST00000497015 CFAP44Q96MT7 982 aa13.41□□□□□ -0.26
SRSF4-205ENST00000497015 TAOK3Q9H2K8 898 aa13.41□□□□□ -0.26
SRSF4-205ENST00000497015 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
SRSF4-205ENST00000497015 EIF5P55010 431 aaKnown RBP13.4□□□□□ -0.26
SRSF4-205ENST00000497015 MAP1SQ66K74 1059 aaPredicted RBP13.4□□□□□ -0.26
SRSF4-205ENST00000497015 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
SRSF4-205ENST00000497015 SLC52A2Q9HAB3 445 aa13.4□□□□□ -0.26
SRSF4-205ENST00000497015 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
SRSF4-205ENST00000497015 TNRC18O15417 2968 aaPredicted RBP13.39□□□□□ -0.27
SRSF4-205ENST00000497015 CANXP27824 592 aaKnown RBP13.39□□□□□ -0.27
SRSF4-205ENST00000497015 EAPPQ56P03 285 aaPredicted RBP13.39□□□□□ -0.27
SRSF4-205ENST00000497015 C1orf141Q5JVX7 400 aa13.39□□□□□ -0.27
SRSF4-205ENST00000497015 IQCA1LA6NCM1 817 aa13.38□□□□□ -0.27
SRSF4-205ENST00000497015 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
SRSF4-205ENST00000497015 SRGNP10124 158 aa13.38□□□□□ -0.27
SRSF4-205ENST00000497015 PDE6BP35913 854 aa13.38□□□□□ -0.27
SRSF4-205ENST00000497015 MAP2K1Q02750 393 aaPredicted RBP13.38□□□□□ -0.27
SRSF4-205ENST00000497015 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
SRSF4-205ENST00000497015 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
SRSF4-205ENST00000497015 SLX4Q8IY92 1834 aa13.38□□□□□ -0.27
SRSF4-205ENST00000497015 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
SRSF4-205ENST00000497015 RNMTO43148 476 aaKnown RBP13.37□□□□□ -0.27
SRSF4-205ENST00000497015 SULT6B1Q6IMI4 303 aa13.37□□□□□ -0.27
SRSF4-205ENST00000497015 PRPF40BQ6NWY9 871 aaKnown RBP13.37□□□□□ -0.27
SRSF4-205ENST00000497015 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
SRSF4-205ENST00000497015 COL11A2P13942 1736 aaPredicted RBP13.36□□□□□ -0.27
SRSF4-205ENST00000497015 EPHX2P34913 555 aa13.36□□□□□ -0.27
SRSF4-205ENST00000497015 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
SRSF4-205ENST00000497015 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
SRSF4-205ENST00000497015 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
SRSF4-205ENST00000497015 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
SRSF4-205ENST00000497015 CST9Q5W186 159 aa13.35□□□□□ -0.27
SRSF4-205ENST00000497015 STYK1Q6J9G0 422 aa13.35□□□□□ -0.27
SRSF4-205ENST00000497015 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
SRSF4-205ENST00000497015 ZNF277Q9NRM2 450 aaPredicted RBP13.35□□□□□ -0.27
SRSF4-205ENST00000497015 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
SRSF4-205ENST00000497015 SCN4AP35499 1836 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 IL13P35225 146 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 SPRYD3Q8NCJ5 442 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 CNKSR1Q969H4 720 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 CAPNS2Q96L46 248 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 GPR101Q96P66 508 aaPredicted RBP13.34□□□□□ -0.27
SRSF4-205ENST00000497015 MCOLN1Q9GZU1 580 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
SRSF4-205ENST00000497015 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
SRSF4-205ENST00000497015 FZD9O00144 591 aa13.33□□□□□ -0.28
SRSF4-205ENST00000497015 AOC2O75106 756 aa13.33□□□□□ -0.28
SRSF4-205ENST00000497015 MASTLQ96GX5 879 aa13.33□□□□□ -0.28
SRSF4-205ENST00000497015 ABT1Q9ULW3 272 aaKnown RBP13.33□□□□□ -0.28
SRSF4-205ENST00000497015 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
SRSF4-205ENST00000497015 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
SRSF4-205ENST00000497015 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRSF4-205ENST00000497015 NBR1Q14596 966 aa13.31□□□□□ -0.28
SRSF4-205ENST00000497015 PNMA8AQ86V59 439 aaPredicted RBP13.31□□□□□ -0.28
SRSF4-205ENST00000497015 CACNA1SQ13698 1873 aa13.31□□□□□ -0.28
SRSF4-205ENST00000497015 KLRG2A4D1S0 409 aaPredicted RBP13.3□□□□□ -0.28
SRSF4-205ENST00000497015 TRAF5O00463 557 aa13.3□□□□□ -0.28
SRSF4-205ENST00000497015 A1BGP04217 495 aa13.3□□□□□ -0.28
SRSF4-205ENST00000497015 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
SRSF4-205ENST00000497015 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
SRSF4-205ENST00000497015 KIF7Q2M1P5 1343 aa13.3□□□□□ -0.28
SRSF4-205ENST00000497015 MRC1P22897 1456 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 THSD7BQ9C0I4 1608 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 A0A087WZG4 1122 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 EPS15P42566 896 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 GRM1Q13255 1194 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 CCDC93Q567U6 631 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 SOGA3Q5TF21 947 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
SRSF4-205ENST00000497015 COL4A5P29400 1685 aa13.28□□□□□ -0.28
SRSF4-205ENST00000497015 LTBP1Q14766 1721 aa13.28□□□□□ -0.28
SRSF4-205ENST00000497015 STARD3NLO95772 234 aa13.28□□□□□ -0.28
SRSF4-205ENST00000497015 SLC51AQ86UW1 340 aa13.28□□□□□ -0.28
SRSF4-205ENST00000497015 GPC2Q8N158 579 aa13.28□□□□□ -0.28
SRSF4-205ENST00000497015 TLL2Q9Y6L7 1015 aa13.28□□□□□ -0.28
SRSF4-205ENST00000497015 MAP2K2P36507 400 aa13.27□□□□□ -0.29
SRSF4-205ENST00000497015 IL6STP40189 918 aaPredicted RBP13.27□□□□□ -0.29
SRSF4-205ENST00000497015 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.29
SRSF4-205ENST00000497015 SCNN1DP51172 638 aa13.27□□□□□ -0.29
SRSF4-205ENST00000497015 ZIC5Q96T25 663 aa13.27□□□□□ -0.29
SRSF4-205ENST00000497015 PANK3Q9H999 370 aa13.27□□□□□ -0.29
SRSF4-205ENST00000497015 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
SRSF4-205ENST00000497015 SNED1Q8TER0 1413 aa13.27□□□□□ -0.29
SRSF4-205ENST00000497015 KCNQ3O43525 872 aa13.26□□□□□ -0.29
SRSF4-205ENST00000497015 HMOX1P09601 288 aa13.26□□□□□ -0.29
SRSF4-205ENST00000497015 ECE1P42892 770 aa13.26□□□□□ -0.29
SRSF4-205ENST00000497015 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
SRSF4-205ENST00000497015 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
SRSF4-205ENST00000497015 BEGAINQ9BUH8 593 aa13.26□□□□□ -0.29
SRSF4-205ENST00000497015 HEG1Q9ULI3 1381 aa13.25□□□□□ -0.29
SRSF4-205ENST00000497015 NPR1P16066 1061 aa13.25□□□□□ -0.29
SRSF4-205ENST00000497015 ST5P78524 1137 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms