RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 MEGF6O75095 1541 aa18.63■□□□□ 0.57
CALD1-222ENST00000495522 CUL4AQ13619 759 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 FAM43AQ8N2R8 423 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
CALD1-222ENST00000495522 C5P01031 1676 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 TNS3Q68CZ2 1445 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 AIMP1Q12904 312 aaKnown RBP18.62■□□□□ 0.57
CALD1-222ENST00000495522 SLC39A6Q13433 755 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 MCTP1Q6DN14 999 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 GPATCH3Q96I76 525 aa18.62■□□□□ 0.57
CALD1-222ENST00000495522 DDX49Q9Y6V7 483 aaKnown RBP18.62■□□□□ 0.57
CALD1-222ENST00000495522 RAD50Q92878 1312 aa18.61■□□□□ 0.57
CALD1-222ENST00000495522 CSB-PGBD3P0DP91 1061 aa18.61■□□□□ 0.57
CALD1-222ENST00000495522 LARP1Q6PKG0 1096 aaKnown RBP18.61■□□□□ 0.57
CALD1-222ENST00000495522 CADPS2Q86UW7 1296 aa18.61■□□□□ 0.57
CALD1-222ENST00000495522 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
CALD1-222ENST00000495522 SUCLG2Q96I99 432 aa18.61■□□□□ 0.57
CALD1-222ENST00000495522 PANK2Q9BZ23 570 aa18.61■□□□□ 0.57
CALD1-222ENST00000495522 RIC3Q7Z5B4 369 aa18.6■□□□□ 0.57
CALD1-222ENST00000495522 INTS4Q96HW7 963 aaKnown RBP18.6■□□□□ 0.57
CALD1-222ENST00000495522 ECHDC1Q9NTX5 307 aa18.6■□□□□ 0.57
CALD1-222ENST00000495522 PA2G4Q9UQ80 394 aaKnown RBP18.6■□□□□ 0.57
CALD1-222ENST00000495522 ZDHHC9Q9Y397 364 aa18.6■□□□□ 0.57
CALD1-222ENST00000495522 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
CALD1-222ENST00000495522 ZNF335Q9H4Z2 1342 aaPredicted RBP18.59■□□□□ 0.57
CALD1-222ENST00000495522 MRC1P22897 1456 aa18.59■□□□□ 0.57
CALD1-222ENST00000495522 NEXNQ0ZGT2 675 aa18.59■□□□□ 0.57
CALD1-222ENST00000495522 KAZALD1Q96I82 304 aa18.58■□□□□ 0.57
CALD1-222ENST00000495522 DCAF5Q96JK2 942 aa18.58■□□□□ 0.57
CALD1-222ENST00000495522 LSG1Q9H089 658 aaKnown RBP18.58■□□□□ 0.57
CALD1-222ENST00000495522 BICC1Q9H694 974 aaKnown RBP18.58■□□□□ 0.57
CALD1-222ENST00000495522 LMBRD1Q9NUN5 540 aa18.58■□□□□ 0.57
CALD1-222ENST00000495522 IGKV5-2P06315 115 aa18.58■□□□□ 0.56
CALD1-222ENST00000495522 KIAA1211Q6ZU35 1233 aa18.58■□□□□ 0.56
CALD1-222ENST00000495522 CABLES1Q8TDN4 633 aa18.58■□□□□ 0.56
CALD1-222ENST00000495522 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.56
CALD1-222ENST00000495522 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.58■□□□□ 0.56
CALD1-222ENST00000495522 MYL6BP14649 208 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 GAS2L3Q86XJ1 694 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 XAGE3Q8WTP9 111 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 RUFY2Q8WXA3 655 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 ZNF496Q96IT1 587 aaPredicted RBP18.57■□□□□ 0.56
CALD1-222ENST00000495522 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 G3BP1Q13283 466 aaKnown RBP eCLIP18.57■□□□□ 0.568e-9■□□□□ 9.6
CALD1-222ENST00000495522 CHRNA2Q15822 529 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
CALD1-222ENST00000495522 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
CALD1-222ENST00000495522 NEURL1BA8MQ27 555 aa18.56■□□□□ 0.56
CALD1-222ENST00000495522 SNRPA1P09661 255 aaKnown RBP18.56■□□□□ 0.56
CALD1-222ENST00000495522 NOL8Q76FK4 1167 aaKnown RBP18.56■□□□□ 0.56
CALD1-222ENST00000495522 AACSQ86V21 672 aa18.56■□□□□ 0.56
CALD1-222ENST00000495522 SPATA31A3Q5VYP0 1347 aa18.56■□□□□ 0.56
CALD1-222ENST00000495522 CPDO75976 1380 aa18.56■□□□□ 0.56
CALD1-222ENST00000495522 XIRP1Q702N8 1843 aaKnown RBP18.56■□□□□ 0.56
CALD1-222ENST00000495522 CYP27B1O15528 508 aa18.55■□□□□ 0.56
CALD1-222ENST00000495522 COPS6Q7L5N1 327 aa18.55■□□□□ 0.56
CALD1-222ENST00000495522 METTL22Q9BUU2 404 aaPredicted RBP18.55■□□□□ 0.56
CALD1-222ENST00000495522 SNX14Q9Y5W7 946 aa18.55■□□□□ 0.56
CALD1-222ENST00000495522 SASH1O94885 1247 aa18.54■□□□□ 0.56
CALD1-222ENST00000495522 BRD1O95696 1058 aa18.54■□□□□ 0.56
CALD1-222ENST00000495522 GCKRQ14397 625 aa18.54■□□□□ 0.56
CALD1-222ENST00000495522 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
CALD1-222ENST00000495522 FMNL2Q96PY5 1086 aa18.54■□□□□ 0.56
CALD1-222ENST00000495522 MYD88Q99836 296 aa18.54■□□□□ 0.56
CALD1-222ENST00000495522 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
CALD1-222ENST00000495522 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
CALD1-222ENST00000495522 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
CALD1-222ENST00000495522 NCLP19338 710 aaKnown RBP18.52■□□□□ 0.56
CALD1-222ENST00000495522 USP16Q9Y5T5 823 aa18.52■□□□□ 0.56
CALD1-222ENST00000495522 CABP4P57796 275 aa18.51■□□□□ 0.55
CALD1-222ENST00000495522 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
CALD1-222ENST00000495522 EAF2Q96CJ1 260 aaPredicted RBP18.51■□□□□ 0.55
CALD1-222ENST00000495522 TTC14Q96N46 770 aa18.51■□□□□ 0.55
CALD1-222ENST00000495522 PARP4Q9UKK3 1724 aaKnown RBP18.51■□□□□ 0.55
CALD1-222ENST00000495522 HIP1O00291 1037 aa18.51■□□□□ 0.55
CALD1-222ENST00000495522 ZNF445P59923 1031 aa18.51■□□□□ 0.55
CALD1-222ENST00000495522 CAVIN1Q6NZI2 390 aaKnown RBP18.51■□□□□ 0.55
CALD1-222ENST00000495522 FOXD4L5Q5VV16 416 aaPredicted RBP18.49■□□□□ 0.55
CALD1-222ENST00000495522 FOXD4L4Q8WXT5 416 aaPredicted RBP18.49■□□□□ 0.55
CALD1-222ENST00000495522 CCDC8Q9H0W5 538 aaPredicted RBP18.49■□□□□ 0.55
CALD1-222ENST00000495522 SIL1Q9H173 461 aa18.49■□□□□ 0.55
CALD1-222ENST00000495522 ZSCAN23Q3MJ62 389 aa18.49■□□□□ 0.55
CALD1-222ENST00000495522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.49■□□□□ 0.55
CALD1-222ENST00000495522 LAMB4A4D0S4 1761 aa18.49■□□□□ 0.55
CALD1-222ENST00000495522 PTH1RQ03431 593 aa18.48■□□□□ 0.55
CALD1-222ENST00000495522 EPHA10Q5JZY3 1008 aa18.48■□□□□ 0.55
CALD1-222ENST00000495522 GPT2Q8TD30 523 aa18.48■□□□□ 0.55
CALD1-222ENST00000495522 COL15A1P39059 1388 aa18.48■□□□□ 0.55
CALD1-222ENST00000495522 AK2P54819 239 aa18.48■□□□□ 0.55
CALD1-222ENST00000495522 KCNB2Q92953 911 aa18.48■□□□□ 0.55
CALD1-222ENST00000495522 LIMCH1Q9UPQ0 1083 aa18.48■□□□□ 0.55
CALD1-222ENST00000495522 AFDNP55196 1824 aaKnown RBP18.47■□□□□ 0.55
CALD1-222ENST00000495522 GLI3P10071 1580 aa18.47■□□□□ 0.55
CALD1-222ENST00000495522 KLHDC4Q8TBB5 520 aa18.47■□□□□ 0.55
CALD1-222ENST00000495522 COPRSQ9NQ92 184 aa18.47■□□□□ 0.55
CALD1-222ENST00000495522 TLR7Q9NYK1 1049 aaKnown RBP18.47■□□□□ 0.55
CALD1-222ENST00000495522 ARFGEF2Q9Y6D5 1785 aa18.47■□□□□ 0.55
CALD1-222ENST00000495522 CCDC171Q6TFL3 1326 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms