RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ALDH16A1Q8IZ83 802 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 ZNF775Q96BV0 537 aaPredicted RBP4.34□□□□□ -1.71
LMNB1-207ENST00000494185 NGLY1Q96IV0 654 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 PRIMPOLQ96LW4 560 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 TRAIPQ9BWF2 469 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 RUBCNLQ9H714 662 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 CXXC1Q9P0U4 656 aaPredicted RBP4.34□□□□□ -1.71
LMNB1-207ENST00000494185 USP3Q9Y6I4 520 aa4.34□□□□□ -1.71
LMNB1-207ENST00000494185 SENP3-EIF4A1A0A087X0R7 540 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 TGFBR3LH3BV60 316 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 C21orf2O43822 256 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 BMP4P12644 408 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 ATP4AP20648 1035 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 BRD2P25440 801 aaKnown RBP4.33□□□□□ -1.72
LMNB1-207ENST00000494185 SSFA2P28290 1259 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 PCSK7Q16549 785 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 OCLNQ16625 522 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 ALKBH2Q6NS38 261 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 C16orf46Q6P387 395 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 VWA5B2Q8N398 1253 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 CCER1Q8TC90 406 aaPredicted RBP4.33□□□□□ -1.72
LMNB1-207ENST00000494185 MYO19Q96H55 970 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 PNMA5Q96PV4 448 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 C11orf16Q9NQ32 467 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 AVENQ9NQS1 362 aaPredicted RBP4.33□□□□□ -1.72
LMNB1-207ENST00000494185 GDF2Q9UK05 429 aaPredicted RBP4.33□□□□□ -1.72
LMNB1-207ENST00000494185 PRR12Q9ULL5 1215 aa4.33□□□□□ -1.72
LMNB1-207ENST00000494185 RNF225M0QZC1 329 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-207ENST00000494185 KHNYNO15037 678 aaKnown RBP4.32□□□□□ -1.72
LMNB1-207ENST00000494185 BRD1O95696 1058 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 SRSF11Q05519 484 aaKnown RBP4.32□□□□□ -1.72
LMNB1-207ENST00000494185 FKBP5Q13451 457 aaPredicted RBP4.32□□□□□ -1.72
LMNB1-207ENST00000494185 C11orf91Q3C1V1 193 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 POTEAQ6S8J7 498 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 ZNF295-AS1Q8N0V1 137 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 GOLGA6L1Q8N7Z2 621 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 GTPBP3Q969Y2 492 aaKnown RBP4.32□□□□□ -1.72
LMNB1-207ENST00000494185 CEP63Q96MT8 703 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 SLAIN2Q9P270 581 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 FNDC3AQ9Y2H6 1198 aaKnown RBP4.32□□□□□ -1.72
LMNB1-207ENST00000494185 HCN4Q9Y3Q4 1203 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 PARP3Q9Y6F1 533 aa4.32□□□□□ -1.72
LMNB1-207ENST00000494185 WIPF1O43516 503 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 FGFR3P22607 806 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 VEGFBP49765 207 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 ARSDP51689 593 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 SF3B2Q13435 895 aaKnown RBP4.31□□□□□ -1.72
LMNB1-207ENST00000494185 FAM182BQ5T319 152 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 LRRC69Q6ZNQ3 347 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 PODNQ7Z5L7 613 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 ZDHHC1Q8WTX9 485 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 MKNK1Q9BUB5 465 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 LRRC4BQ9NT99 713 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 MARK1Q9P0L2 795 aa4.31□□□□□ -1.72
LMNB1-207ENST00000494185 DCDC2BA2VCK2 349 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 ALAS2P22557 587 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 ADH6P28332 368 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 TXLNAP40222 546 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 USP5P45974 858 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 DGKZQ13574 1117 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 DBN1Q16643 649 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 SH3PXD2AQ5TCZ1 1133 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 PHLDB3Q6NSJ2 640 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 KCTD17Q8N5Z5 321 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 SUSD3Q96L08 255 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 ZIC5Q96T25 663 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 COL25A1Q9BXS0 654 aaPredicted RBP4.3□□□□□ -1.72
LMNB1-207ENST00000494185 ZCCHC2Q9C0B9 1178 aaKnown RBP4.3□□□□□ -1.72
LMNB1-207ENST00000494185 BRD7Q9NPI1 651 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 KCNH4Q9UQ05 1017 aa4.3□□□□□ -1.72
LMNB1-207ENST00000494185 FAM13AO94988 1023 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 KCNA1Q09470 495 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 AAMPQ13685 434 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 BTLAQ7Z6A9 289 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 HELQQ8TDG4 1101 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 PIK3R5Q8WYR1 880 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 ABHD17AQ96GS6 310 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 STIM2Q9P246 746 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 EGFL7Q9UHF1 273 aa4.29□□□□□ -1.72
LMNB1-207ENST00000494185 FAM177BA6PVY3 158 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 NEFLP07196 543 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 ARAFP10398 606 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 MAPTP10636 758 aaKnown RBP4.28□□□□□ -1.72
LMNB1-207ENST00000494185 EHHADHQ08426 723 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 AEBP1Q8IUX7 1158 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 SVOPQ8N4V2 548 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 ZSCAN1Q8NBB4 408 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 IFT43Q96FT9 208 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 CNTNAP3BQ96NU0 1288 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 OXCT2Q9BYC2 517 aaPredicted RBP4.28□□□□□ -1.72
LMNB1-207ENST00000494185 CNTNAP3Q9BZ76 1288 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 BCL11AQ9H165 835 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 RBSNQ9H1K0 784 aa4.28□□□□□ -1.72
LMNB1-207ENST00000494185 QTRT2Q9H974 415 aaKnown RBP4.28□□□□□ -1.72
LMNB1-207ENST00000494185 IGF1RP08069 1367 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 SPDYE3A6NKU9 549 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 GPR25O00155 361 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 ADAMTS2O95450 1211 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 ABL1P00519 1130 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 AMPD1P23109 780 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms