RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 TIMMDC1Q9NPL8 285 aa7.35□□□□□ -1.23
RTN4-215ENST00000491592 ZDHHC3Q9NYG2 299 aa7.35□□□□□ -1.23
RTN4-215ENST00000491592 SENP3-EIF4A1A0A087X0R7 540 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 A0A1B0GTH6 734 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 ZBTB7CA1YPR0 619 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 PATL2C9JE40 543 aaKnown RBP7.34□□□□□ -1.23
RTN4-215ENST00000491592 ARHGEF15O94989 841 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 KANK3Q6NY19 840 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 SCARF2Q96GP6 870 aaPredicted RBP7.34□□□□□ -1.23
RTN4-215ENST00000491592 NGLY1Q96IV0 654 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 PHACTR1Q9C0D0 580 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 QTRT2Q9H974 415 aaKnown RBP7.34□□□□□ -1.23
RTN4-215ENST00000491592 SEPT3Q9UH03 358 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 MTMR7Q9Y216 660 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 IVNS1ABPQ9Y6Y0 642 aa7.34□□□□□ -1.23
RTN4-215ENST00000491592 IGHA1P01876 353 aa7.33□□□□□ -1.24
RTN4-215ENST00000491592 TATP17735 454 aaPredicted RBP7.33□□□□□ -1.24
RTN4-215ENST00000491592 SERPINB4P48594 390 aa7.33□□□□□ -1.24
RTN4-215ENST00000491592 TXNDC2Q86VQ3 553 aa7.33□□□□□ -1.24
RTN4-215ENST00000491592 ALDH16A1Q8IZ83 802 aa7.33□□□□□ -1.24
RTN4-215ENST00000491592 AIDAQ96BJ3 306 aa7.33□□□□□ -1.24
RTN4-215ENST00000491592 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
RTN4-215ENST00000491592 DNMT3AQ9Y6K1 912 aaPredicted RBP7.33□□□□□ -1.24
RTN4-215ENST00000491592 ARID4AP29374 1257 aaPredicted RBP7.32□□□□□ -1.24
RTN4-215ENST00000491592 IRS1P35568 1242 aa7.32□□□□□ -1.24
RTN4-215ENST00000491592 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
RTN4-215ENST00000491592 CCER1Q8TC90 406 aaPredicted RBP7.32□□□□□ -1.24
RTN4-215ENST00000491592 RHPN1Q8TCX5 695 aa7.32□□□□□ -1.24
RTN4-215ENST00000491592 GPAMQ9HCL2 828 aa7.32□□□□□ -1.24
RTN4-215ENST00000491592 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.32□□□□□ -1.24
RTN4-215ENST00000491592 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
RTN4-215ENST00000491592 DYRK1BQ9Y463 629 aa7.32□□□□□ -1.24
RTN4-215ENST00000491592 SHROOM4Q9ULL8 1493 aa7.31□□□□□ -1.24
RTN4-215ENST00000491592 MSX1P28360 303 aa7.31□□□□□ -1.24
RTN4-215ENST00000491592 SRSF11Q05519 484 aaKnown RBP7.31□□□□□ -1.24
RTN4-215ENST00000491592 NAA30Q147X3 362 aaPredicted RBP7.31□□□□□ -1.24
RTN4-215ENST00000491592 RTN1Q16799 776 aa7.31□□□□□ -1.24
RTN4-215ENST00000491592 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
RTN4-215ENST00000491592 C16orf46Q6P387 395 aa7.31□□□□□ -1.24
RTN4-215ENST00000491592 WHAMMQ8TF30 809 aa7.31□□□□□ -1.24
RTN4-215ENST00000491592 MYO19Q96H55 970 aa7.31□□□□□ -1.24
RTN4-215ENST00000491592 ADAMTS2O95450 1211 aa7.3□□□□□ -1.24
RTN4-215ENST00000491592 ZNF211Q13398 564 aaPredicted RBP7.3□□□□□ -1.24
RTN4-215ENST00000491592 HELQQ8TDG4 1101 aa7.3□□□□□ -1.24
RTN4-215ENST00000491592 GMCL1Q96IK5 515 aa7.3□□□□□ -1.24
RTN4-215ENST00000491592 GAS2L1Q99501 681 aaPredicted RBP7.3□□□□□ -1.24
RTN4-215ENST00000491592 SAP130Q9H0E3 1048 aa7.3□□□□□ -1.24
RTN4-215ENST00000491592 ENAMQ9NRM1 1142 aa7.3□□□□□ -1.24
RTN4-215ENST00000491592 GPC6Q9Y625 555 aaPredicted RBP7.3□□□□□ -1.24
RTN4-215ENST00000491592 ABL1P00519 1130 aa7.29□□□□□ -1.24
RTN4-215ENST00000491592 DGKZQ13574 1117 aa7.29□□□□□ -1.24
RTN4-215ENST00000491592 COX20Q5RI15 118 aa7.29□□□□□ -1.24
RTN4-215ENST00000491592 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
RTN4-215ENST00000491592 RUBCNLQ9H714 662 aa7.29□□□□□ -1.24
RTN4-215ENST00000491592 EGFL7Q9UHF1 273 aa7.29□□□□□ -1.24
RTN4-215ENST00000491592 LRFN2Q9ULH4 789 aa7.29□□□□□ -1.24
RTN4-215ENST00000491592 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
RTN4-215ENST00000491592 H3BRB1 525 aa7.28□□□□□ -1.24
RTN4-215ENST00000491592 TNFRSF10BO14763 440 aa7.28□□□□□ -1.24
RTN4-215ENST00000491592 F11P03951 625 aa7.28□□□□□ -1.24
RTN4-215ENST00000491592 CDK11BP21127 795 aaKnown RBP7.28□□□□□ -1.24
RTN4-215ENST00000491592 GPAT2Q6NUI2 795 aa7.28□□□□□ -1.24
RTN4-215ENST00000491592 FOXR1Q6PIV2 292 aa7.28□□□□□ -1.24
RTN4-215ENST00000491592 BICDL1Q6ZP65 573 aa7.28□□□□□ -1.24
RTN4-215ENST00000491592 CRISPLD1Q9H336 500 aa7.28□□□□□ -1.24
RTN4-215ENST00000491592 TUT1Q9H6E5 874 aaKnown RBP7.28□□□□□ -1.24
RTN4-215ENST00000491592 MTMR3Q13615 1198 aa7.27□□□□□ -1.25
RTN4-215ENST00000491592 ARSJQ5FYB0 599 aaPredicted RBP7.27□□□□□ -1.25
RTN4-215ENST00000491592 LYPD4Q6UWN0 246 aa7.27□□□□□ -1.25
RTN4-215ENST00000491592 PGBD3Q8N328 593 aa7.27□□□□□ -1.25
RTN4-215ENST00000491592 KLRG1Q96E93 195 aa7.27□□□□□ -1.25
RTN4-215ENST00000491592 HSH2DQ96JZ2 352 aa7.27□□□□□ -1.25
RTN4-215ENST00000491592 KLK14Q9P0G3 267 aa7.27□□□□□ -1.25
RTN4-215ENST00000491592 LOC105371045A0A1W2PR82 267 aa7.26□□□□□ -1.25
RTN4-215ENST00000491592 CELA2BP08218 269 aaPredicted RBP7.26□□□□□ -1.25
RTN4-215ENST00000491592 HIF1AQ16665 826 aa7.26□□□□□ -1.25
RTN4-215ENST00000491592 RIPOR1Q6ZS17 1223 aa7.26□□□□□ -1.25
RTN4-215ENST00000491592 C7orf43Q8WVR3 580 aa7.26□□□□□ -1.25
RTN4-215ENST00000491592 ZIC5Q96T25 663 aa7.26□□□□□ -1.25
RTN4-215ENST00000491592 ANO2Q9NQ90 1003 aa7.26□□□□□ -1.25
RTN4-215ENST00000491592 A0A1W2PNR3 127 aa7.25□□□□□ -1.25
RTN4-215ENST00000491592 SOWAHDA6NJG2 315 aa7.25□□□□□ -1.25
RTN4-215ENST00000491592 TGFBR3LH3BV60 316 aa7.25□□□□□ -1.25
RTN4-215ENST00000491592 THBS1P07996 1170 aa7.25□□□□□ -1.25
RTN4-215ENST00000491592 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
RTN4-215ENST00000491592 LBRQ14739 615 aaKnown RBP7.25□□□□□ -1.25
RTN4-215ENST00000491592 GLYCTKQ8IVS8 523 aa7.25□□□□□ -1.25
RTN4-215ENST00000491592 SUSD3Q96L08 255 aa7.25□□□□□ -1.25
RTN4-215ENST00000491592 MBIPQ9NS73 344 aa7.25□□□□□ -1.25
RTN4-215ENST00000491592 CUEDC1Q9NWM3 386 aaPredicted RBP7.25□□□□□ -1.25
RTN4-215ENST00000491592 PHF20L1A8MW92 1017 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 H7C1W4 665 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 ICMTO60725 284 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 MPSTP25325 297 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 C11orf91Q3C1V1 193 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 LRRC69Q6ZNQ3 347 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 TRIM22Q8IYM9 498 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 ABTB2Q8N961 1025 aa7.24□□□□□ -1.25
RTN4-215ENST00000491592 ZNF280CQ8ND82 737 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms