RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 NGEFQ8N5V2 710 aa25.83■■□□□ 1.73
SMC4-222ENST00000490207 LAS1LQ9Y4W2 734 aaKnown RBP25.83■■□□□ 1.73
SMC4-222ENST00000490207 CACNA1SQ13698 1873 aa25.83■■□□□ 1.72
SMC4-222ENST00000490207 H0YIN7 160 aa25.82■■□□□ 1.72
SMC4-222ENST00000490207 ANP32CO43423 234 aa25.82■■□□□ 1.72
SMC4-222ENST00000490207 ST5P78524 1137 aa25.82■■□□□ 1.72
SMC4-222ENST00000490207 KIF6Q6ZMV9 814 aa25.82■■□□□ 1.72
SMC4-222ENST00000490207 CCDC24Q8N4L8 307 aa25.82■■□□□ 1.72
SMC4-222ENST00000490207 CHL1O00533 1208 aa25.81■■□□□ 1.72
SMC4-222ENST00000490207 APAF1O14727 1248 aa25.81■■□□□ 1.72
SMC4-222ENST00000490207 BRIP1Q9BX63 1249 aa25.81■■□□□ 1.72
SMC4-222ENST00000490207 NIP7Q9Y221 180 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMC4-222ENST00000490207 ARFGEF2Q9Y6D5 1785 aa25.81■■□□□ 1.72
SMC4-222ENST00000490207 EIF2S2P20042 333 aaKnown RBP25.8■■□□□ 1.72
SMC4-222ENST00000490207 PDE6BP35913 854 aa25.8■■□□□ 1.72
SMC4-222ENST00000490207 HLFQ16534 295 aa25.8■■□□□ 1.72
SMC4-222ENST00000490207 NBPF5PQ86XG9 351 aaPredicted RBP25.8■■□□□ 1.72
SMC4-222ENST00000490207 PDZRN3Q9UPQ7 1066 aa25.8■■□□□ 1.72
SMC4-222ENST00000490207 MAP3K15Q6ZN16 1313 aa25.8■■□□□ 1.72
SMC4-222ENST00000490207 TTLL7Q6ZT98 887 aa25.79■■□□□ 1.72
SMC4-222ENST00000490207 ERVV-1B6SEH8 477 aa25.78■■□□□ 1.72
SMC4-222ENST00000490207 ANKRD36CQ5JPF3 1778 aa25.77■■□□□ 1.72
SMC4-222ENST00000490207 SBF1O95248 1867 aa25.77■■□□□ 1.72
SMC4-222ENST00000490207 TTLL6Q8N841 843 aa25.77■■□□□ 1.72
SMC4-222ENST00000490207 KRT24Q2M2I5 525 aa25.76■■□□□ 1.71
SMC4-222ENST00000490207 CFAP44Q96MT7 982 aa25.76■■□□□ 1.71
SMC4-222ENST00000490207 ZBTB3Q9H5J0 574 aa25.76■■□□□ 1.71
SMC4-222ENST00000490207 MRS2Q9HD23 443 aa25.76■■□□□ 1.71
SMC4-222ENST00000490207 TNRC6CQ9HCJ0 1690 aaKnown RBP25.75■■□□□ 1.71
SMC4-222ENST00000490207 PDIA6Q15084 440 aa25.75■■□□□ 1.71
SMC4-222ENST00000490207 ZNF622Q969S3 477 aaKnown RBP eCLIP25.75■■□□□ 1.71
SMC4-222ENST00000490207 FAM177BA6PVY3 158 aa25.74■■□□□ 1.71
SMC4-222ENST00000490207 PROSER3Q2NL68 480 aa25.74■■□□□ 1.71
SMC4-222ENST00000490207 LRP10Q7Z4F1 713 aa25.74■■□□□ 1.71
SMC4-222ENST00000490207 NECTIN2Q92692 538 aa25.74■■□□□ 1.71
SMC4-222ENST00000490207 ANXA1P04083 346 aa25.73■■□□□ 1.71
SMC4-222ENST00000490207 CALD1Q05682 793 aaKnown RBP25.73■■□□□ 1.71
SMC4-222ENST00000490207 TPTE2Q6XPS3 522 aa25.73■■□□□ 1.71
SMC4-222ENST00000490207 ZNF526Q8TF50 670 aaPredicted RBP25.73■■□□□ 1.71
SMC4-222ENST00000490207 MBIPQ9NS73 344 aa25.73■■□□□ 1.71
SMC4-222ENST00000490207 GPBP1L1Q9HC44 474 aaPredicted RBP25.72■■□□□ 1.71
SMC4-222ENST00000490207 IFT57Q9NWB7 429 aa25.72■■□□□ 1.71
SMC4-222ENST00000490207 IBTKQ9P2D0 1353 aaPredicted RBP25.71■■□□□ 1.71
SMC4-222ENST00000490207 HOXB7P09629 217 aa25.71■■□□□ 1.71
SMC4-222ENST00000490207 ZNF853P0CG23 659 aa25.71■■□□□ 1.71
SMC4-222ENST00000490207 SLX4Q8IY92 1834 aa25.71■■□□□ 1.71
SMC4-222ENST00000490207 CCDC88AQ3V6T2 1871 aa25.7■■□□□ 1.71
SMC4-222ENST00000490207 GNAI1P63096 354 aa25.7■■□□□ 1.7
SMC4-222ENST00000490207 C9orf131Q5VYM1 1079 aa25.7■■□□□ 1.7
SMC4-222ENST00000490207 NYXQ9GZU5 481 aa25.7■■□□□ 1.7
SMC4-222ENST00000490207 TIAM2Q8IVF5 1701 aa25.7■■□□□ 1.7
SMC4-222ENST00000490207 FER1L6Q2WGJ9 1857 aa25.7■■□□□ 1.7
SMC4-222ENST00000490207 UBN2Q6ZU65 1347 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 SRGNP10124 158 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 GPTP24298 496 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 RASSF7Q02833 373 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 HDGFL1Q5TGJ6 251 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 STYK1Q6J9G0 422 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 GIGYF2Q6Y7W6 1299 aaKnown RBP25.69■■□□□ 1.7
SMC4-222ENST00000490207 MASTLQ96GX5 879 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 ABCC12Q96J65 1359 aa25.69■■□□□ 1.7
SMC4-222ENST00000490207 GTF2E1P29083 439 aaPredicted RBP25.68■■□□□ 1.7
SMC4-222ENST00000490207 CNKSR1Q969H4 720 aa25.68■■□□□ 1.7
SMC4-222ENST00000490207 DDX21Q9NR30 783 aaKnown RBP eCLIP25.68■■□□□ 1.7
SMC4-222ENST00000490207 RNF181Q9P0P0 153 aa25.68■■□□□ 1.7
SMC4-222ENST00000490207 CHPF2Q9P2E5 772 aa25.68■■□□□ 1.7
SMC4-222ENST00000490207 DUSP27Q5VZP5 1158 aa25.66■■□□□ 1.7
SMC4-222ENST00000490207 COPS6Q7L5N1 327 aa25.66■■□□□ 1.7
SMC4-222ENST00000490207 ZNF34Q8IZ26 560 aa25.66■■□□□ 1.7
SMC4-222ENST00000490207 XAGE3Q8WTP9 111 aa25.66■■□□□ 1.7
SMC4-222ENST00000490207 RIC1Q4ADV7 1423 aa25.65■■□□□ 1.7
SMC4-222ENST00000490207 AIMP1Q12904 312 aaKnown RBP25.65■■□□□ 1.7
SMC4-222ENST00000490207 PRPF40BQ6NWY9 871 aaKnown RBP25.65■■□□□ 1.7
SMC4-222ENST00000490207 NUTM1Q86Y26 1132 aa25.65■■□□□ 1.7
SMC4-222ENST00000490207 ZNF219Q9P2Y4 722 aaPredicted RBP25.65■■□□□ 1.7
SMC4-222ENST00000490207 SENP3-EIF4A1A0A087X0R7 540 aa25.64■■□□□ 1.7
SMC4-222ENST00000490207 KLRG2A4D1S0 409 aaPredicted RBP25.64■■□□□ 1.7
SMC4-222ENST00000490207 C21orf2O43822 256 aa25.64■■□□□ 1.7
SMC4-222ENST00000490207 NPR1P16066 1061 aa25.64■■□□□ 1.7
SMC4-222ENST00000490207 C1QTNF8P60827 252 aa25.64■■□□□ 1.7
SMC4-222ENST00000490207 DICER1Q9UPY3 1922 aaKnown RBP25.63■■□□□ 1.69
SMC4-222ENST00000490207 NFKBIEO00221 500 aa25.63■■□□□ 1.69
SMC4-222ENST00000490207 CCDC27Q2M243 656 aa25.63■■□□□ 1.69
SMC4-222ENST00000490207 ERFEQ4G0M1 354 aa25.63■■□□□ 1.69
SMC4-222ENST00000490207 PARP10Q53GL7 1025 aa25.63■■□□□ 1.69
SMC4-222ENST00000490207 SUSD4Q5VX71 490 aa25.63■■□□□ 1.69
SMC4-222ENST00000490207 NTSR2O95665 410 aa25.62■■□□□ 1.69
SMC4-222ENST00000490207 HSP90AB3PQ58FF7 597 aa25.62■■□□□ 1.69
SMC4-222ENST00000490207 PPP1R42Q7Z4L9 355 aa25.62■■□□□ 1.69
SMC4-222ENST00000490207 DBF4Q9UBU7 674 aaPredicted RBP25.62■■□□□ 1.69
SMC4-222ENST00000490207 LMNB1P20700 586 aa25.61■■□□□ 1.69
SMC4-222ENST00000490207 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
SMC4-222ENST00000490207 LAMB2P55268 1798 aa25.59■■□□□ 1.69
SMC4-222ENST00000490207 PRELPP51888 382 aa25.59■■□□□ 1.69
SMC4-222ENST00000490207 WWC1Q8IX03 1113 aa25.59■■□□□ 1.69
SMC4-222ENST00000490207 ZC3H4Q9UPT8 1303 aaKnown RBP25.59■■□□□ 1.69
SMC4-222ENST00000490207 HYPKQ9NX55 129 aa25.58■■□□□ 1.69
SMC4-222ENST00000490207 ELL2O00472 640 aaPredicted RBP25.57■■□□□ 1.68
SMC4-222ENST00000490207 CRY2Q49AN0 593 aa25.57■■□□□ 1.68
SMC4-222ENST00000490207 NCBP3Q53F19 620 aaKnown RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms