RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CHD4Q14839 1912 aa29.14■■■□□ 2.25
CDHR3-212ENST00000487084 KCNA3P22001 575 aa29.13■■■□□ 2.25
CDHR3-212ENST00000487084 GNAI1P63096 354 aa29.13■■■□□ 2.25
CDHR3-212ENST00000487084 PRR5LQ6MZQ0 368 aa29.13■■■□□ 2.25
CDHR3-212ENST00000487084 TTLL7Q6ZT98 887 aa29.13■■■□□ 2.25
CDHR3-212ENST00000487084 FAM9BQ8IZU0 186 aa29.13■■■□□ 2.25
CDHR3-212ENST00000487084 CNBD1Q8NA66 436 aa29.13■■■□□ 2.25
CDHR3-212ENST00000487084 NIP7Q9Y221 180 aaKnown RBP eCLIP29.13■■■□□ 2.25
CDHR3-212ENST00000487084 ANXA1P04083 346 aa29.12■■■□□ 2.25
CDHR3-212ENST00000487084 MAP3K15Q6ZN16 1313 aa29.12■■■□□ 2.25
CDHR3-212ENST00000487084 ZNF853P0CG23 659 aa29.11■■■□□ 2.25
CDHR3-212ENST00000487084 PROSER3Q2NL68 480 aa29.11■■■□□ 2.25
CDHR3-212ENST00000487084 NBPF5PQ86XG9 351 aaPredicted RBP29.11■■■□□ 2.25
CDHR3-212ENST00000487084 ZBTB3Q9H5J0 574 aa29.11■■■□□ 2.25
CDHR3-212ENST00000487084 ST5P78524 1137 aa29.1■■■□□ 2.25
CDHR3-212ENST00000487084 PDIA6Q15084 440 aa29.1■■■□□ 2.25
CDHR3-212ENST00000487084 C2CD5Q86YS7 1000 aa29.1■■■□□ 2.25
CDHR3-212ENST00000487084 FAM177BA6PVY3 158 aa29.09■■■□□ 2.25
CDHR3-212ENST00000487084 ERVV-1B6SEH8 477 aa29.09■■■□□ 2.25
CDHR3-212ENST00000487084 RGL2O15211 777 aa29.09■■■□□ 2.25
CDHR3-212ENST00000487084 DALRD3Q5D0E6 543 aaKnown RBP29.09■■■□□ 2.25
CDHR3-212ENST00000487084 HDGFL1Q5TGJ6 251 aa29.09■■■□□ 2.25
CDHR3-212ENST00000487084 DUSP27Q5VZP5 1158 aa29.08■■■□□ 2.25
CDHR3-212ENST00000487084 SALL2Q9Y467 1007 aaPredicted RBP29.08■■■□□ 2.25
CDHR3-212ENST00000487084 HOXB7P09629 217 aa29.07■■■□□ 2.24
CDHR3-212ENST00000487084 BRIP1Q9BX63 1249 aa29.07■■■□□ 2.24
CDHR3-212ENST00000487084 H0YIN7 160 aa29.06■■■□□ 2.24
CDHR3-212ENST00000487084 AIMP1Q12904 312 aaKnown RBP29.06■■■□□ 2.24
CDHR3-212ENST00000487084 CCDC27Q2M243 656 aa29.06■■■□□ 2.24
CDHR3-212ENST00000487084 LRP10Q7Z4F1 713 aa29.06■■■□□ 2.24
CDHR3-212ENST00000487084 WWC1Q8IX03 1113 aa29.06■■■□□ 2.24
CDHR3-212ENST00000487084 CHPF2Q9P2E5 772 aa29.06■■■□□ 2.24
CDHR3-212ENST00000487084 PDE6BP35913 854 aa29.05■■■□□ 2.24
CDHR3-212ENST00000487084 BRCA1P38398 1863 aaKnown RBP29.05■■■□□ 2.24
CDHR3-212ENST00000487084 ELL2O00472 640 aaPredicted RBP29.04■■■□□ 2.24
CDHR3-212ENST00000487084 GPTP24298 496 aa29.04■■■□□ 2.24
CDHR3-212ENST00000487084 ARHGAP27Q6ZUM4 889 aa29.04■■■□□ 2.24
CDHR3-212ENST00000487084 DDX21Q9NR30 783 aaKnown RBP eCLIP29.04■■■□□ 2.24
CDHR3-212ENST00000487084 TPTE2Q6XPS3 522 aa29.03■■■□□ 2.24
CDHR3-212ENST00000487084 ZNF784Q8NCA9 323 aaPredicted RBP29.03■■■□□ 2.24
CDHR3-212ENST00000487084 XAGE3Q8WTP9 111 aa29.03■■■□□ 2.24
CDHR3-212ENST00000487084 GTF2E1P29083 439 aaPredicted RBP29.02■■■□□ 2.24
CDHR3-212ENST00000487084 COPS6Q7L5N1 327 aa29.02■■■□□ 2.24
CDHR3-212ENST00000487084 ZNF622Q969S3 477 aaKnown RBP eCLIP29.02■■■□□ 2.24
CDHR3-212ENST00000487084 ATP10DQ9P241 1426 aa29.02■■■□□ 2.24
CDHR3-212ENST00000487084 GIGYF2Q6Y7W6 1299 aaKnown RBP29.01■■■□□ 2.23
CDHR3-212ENST00000487084 TSR2Q969E8 191 aaKnown RBP29.01■■■□□ 2.23
CDHR3-212ENST00000487084 ANKRD31Q8N7Z5 1873 aa29.01■■■□□ 2.23
CDHR3-212ENST00000487084 TTLL6Q8N841 843 aa29■■■□□ 2.23
CDHR3-212ENST00000487084 DBF4Q9UBU7 674 aaPredicted RBP29■■■□□ 2.23
CDHR3-212ENST00000487084 PDZRN3Q9UPQ7 1066 aa29■■■□□ 2.23
CDHR3-212ENST00000487084 C8orf58Q8NAV2 365 aa28.98■■■□□ 2.23
CDHR3-212ENST00000487084 NYXQ9GZU5 481 aa28.98■■■□□ 2.23
CDHR3-212ENST00000487084 NUP98P52948 1817 aa28.98■■■□□ 2.23
CDHR3-212ENST00000487084 UBN2Q6ZU65 1347 aa28.97■■■□□ 2.23
CDHR3-212ENST00000487084 NCBP3Q53F19 620 aaKnown RBP28.97■■■□□ 2.23
CDHR3-212ENST00000487084 DLEC1Q9Y238 1755 aa28.97■■■□□ 2.23
CDHR3-212ENST00000487084 ARFGEF1Q9Y6D6 1849 aa28.97■■■□□ 2.23
CDHR3-212ENST00000487084 NUTM1Q86Y26 1132 aa28.96■■■□□ 2.23
CDHR3-212ENST00000487084 ZNF34Q8IZ26 560 aa28.96■■■□□ 2.23
CDHR3-212ENST00000487084 COL11A2P13942 1736 aaPredicted RBP28.95■■■□□ 2.23
CDHR3-212ENST00000487084 IL16Q14005 1332 aa28.94■■■□□ 2.22
CDHR3-212ENST00000487084 SUSD4Q5VX71 490 aa28.94■■■□□ 2.22
CDHR3-212ENST00000487084 TSPYL6Q8N831 410 aa28.94■■■□□ 2.22
CDHR3-212ENST00000487084 HYPKQ9NX55 129 aa28.94■■■□□ 2.22
CDHR3-212ENST00000487084 SRGNP10124 158 aa28.93■■■□□ 2.22
CDHR3-212ENST00000487084 MASTLQ96GX5 879 aa28.93■■■□□ 2.22
CDHR3-212ENST00000487084 ZNF219Q9P2Y4 722 aaPredicted RBP28.93■■■□□ 2.22
CDHR3-212ENST00000487084 ABCC12Q96J65 1359 aa28.92■■■□□ 2.22
CDHR3-212ENST00000487084 ERFEQ4G0M1 354 aa28.92■■■□□ 2.22
CDHR3-212ENST00000487084 PARP10Q53GL7 1025 aa28.92■■■□□ 2.22
CDHR3-212ENST00000487084 HSP90AB3PQ58FF7 597 aa28.92■■■□□ 2.22
CDHR3-212ENST00000487084 STYK1Q6J9G0 422 aa28.92■■■□□ 2.22
CDHR3-212ENST00000487084 PPP1R42Q7Z4L9 355 aa28.92■■■□□ 2.22
CDHR3-212ENST00000487084 WDR63Q8IWG1 891 aa28.91■■■□□ 2.22
CDHR3-212ENST00000487084 CNKSR1Q969H4 720 aa28.91■■■□□ 2.22
CDHR3-212ENST00000487084 IBTKQ9P2D0 1353 aaPredicted RBP28.9■■■□□ 2.22
CDHR3-212ENST00000487084 CCDC30Q5VVM6 783 aa28.9■■■□□ 2.22
CDHR3-212ENST00000487084 ADCY9O60503 1353 aa28.89■■■□□ 2.22
CDHR3-212ENST00000487084 NTSR2O95665 410 aa28.89■■■□□ 2.22
CDHR3-212ENST00000487084 ANKRD13DQ6ZTN6 518 aa28.89■■■□□ 2.22
CDHR3-212ENST00000487084 PLBD2Q8NHP8 589 aa28.89■■■□□ 2.22
CDHR3-212ENST00000487084 FANCIQ9NVI1 1328 aa28.89■■■□□ 2.21
CDHR3-212ENST00000487084 NPR1P16066 1061 aa28.88■■■□□ 2.21
CDHR3-212ENST00000487084 RASSF7Q02833 373 aa28.88■■■□□ 2.21
CDHR3-212ENST00000487084 TCIRG1Q13488 830 aa28.88■■■□□ 2.21
CDHR3-212ENST00000487084 ZNF526Q8TF50 670 aaPredicted RBP28.88■■■□□ 2.21
CDHR3-212ENST00000487084 UTP14AQ9BVJ6 771 aaKnown RBP28.88■■■□□ 2.21
CDHR3-212ENST00000487084 CHMP4AQ9BY43 222 aa28.88■■■□□ 2.21
CDHR3-212ENST00000487084 PHAXQ9H814 394 aaKnown RBP28.88■■■□□ 2.21
CDHR3-212ENST00000487084 C21orf2O43822 256 aa28.87■■■□□ 2.21
CDHR3-212ENST00000487084 TWISTNBQ3B726 338 aaPredicted RBP28.87■■■□□ 2.21
CDHR3-212ENST00000487084 C9orf131Q5VYM1 1079 aa28.87■■■□□ 2.21
CDHR3-212ENST00000487084 PRPF40BQ6NWY9 871 aaKnown RBP28.87■■■□□ 2.21
CDHR3-212ENST00000487084 KLRG2A4D1S0 409 aaPredicted RBP28.86■■■□□ 2.21
CDHR3-212ENST00000487084 GOLGA2Q08379 1002 aa28.86■■■□□ 2.21
CDHR3-212ENST00000487084 TNRC6CQ9HCJ0 1690 aaKnown RBP28.86■■■□□ 2.21
CDHR3-212ENST00000487084 TCERG1O14776 1098 aaKnown RBP28.85■■■□□ 2.21
CDHR3-212ENST00000487084 NLRP10Q86W26 655 aa28.85■■■□□ 2.21
CDHR3-212ENST00000487084 ZNF428Q96B54 188 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms