RNA–Protein interactions for RNA: ENST00000484393.1

MACF1-218, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-218ENST00000484393 ANKRD26Q9UPS8 1709 aa8.26□□□□□ -1.09
MACF1-218ENST00000484393 ACTN4O43707 911 aaKnown RBP8.26□□□□□ -1.09
MACF1-218ENST00000484393 ZPR1O75312 459 aa8.26□□□□□ -1.09
MACF1-218ENST00000484393 UBE2Q2Q8WVN8 375 aa8.26□□□□□ -1.09
MACF1-218ENST00000484393 PDGFDQ9GZP0 370 aaPredicted RBP8.26□□□□□ -1.09
MACF1-218ENST00000484393 CABP1Q9NZU7 370 aa8.26□□□□□ -1.09
MACF1-218ENST00000484393 NUP188Q5SRE5 1749 aa8.26□□□□□ -1.09
MACF1-218ENST00000484393 CD163L1Q9NR16 1453 aa8.26□□□□□ -1.09
MACF1-218ENST00000484393 POLR3AO14802 1390 aaPredicted RBP8.25□□□□□ -1.09
MACF1-218ENST00000484393 RREB1Q92766 1687 aa8.25□□□□□ -1.09
MACF1-218ENST00000484393 TRIM66O15016 1216 aa8.25□□□□□ -1.09
MACF1-218ENST00000484393 GFRA3O60609 400 aa8.25□□□□□ -1.09
MACF1-218ENST00000484393 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
MACF1-218ENST00000484393 COL13A1Q5TAT6 717 aaPredicted RBP8.25□□□□□ -1.09
MACF1-218ENST00000484393 USP6P35125 1406 aa8.25□□□□□ -1.09
MACF1-218ENST00000484393 RGPD5Q99666 1765 aa8.25□□□□□ -1.09
MACF1-218ENST00000484393 USP54Q70EL1 1684 aa8.24□□□□□ -1.09
MACF1-218ENST00000484393 A0A1W2PP64 1363 aa8.24□□□□□ -1.09
MACF1-218ENST00000484393 KTN1Q86UP2 1357 aaKnown RBP8.24□□□□□ -1.09
MACF1-218ENST00000484393 PLSCR1O15162 318 aa8.24□□□□□ -1.09
MACF1-218ENST00000484393 TLL1O43897 1013 aa8.24□□□□□ -1.09
MACF1-218ENST00000484393 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
MACF1-218ENST00000484393 GIGYF2Q6Y7W6 1299 aaKnown RBP8.24□□□□□ -1.09
MACF1-218ENST00000484393 TNS4Q8IZW8 715 aa8.24□□□□□ -1.09
MACF1-218ENST00000484393 SBNO1A3KN83 1393 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 PLEKHG3A1L390 1219 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 CD46P15529 392 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 GCGRP47871 477 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 FUT2Q10981 343 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 AMHR2Q16671 573 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 CDCA8Q53HL2 280 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 NUTM2GQ5VZR2 741 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 MTFR1LQ9H019 292 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 SLC12A5Q9H2X9 1139 aa8.23□□□□□ -1.09
MACF1-218ENST00000484393 GPBP1L1Q9HC44 474 aaPredicted RBP8.23□□□□□ -1.09
MACF1-218ENST00000484393 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
MACF1-218ENST00000484393 ARHGEF10O15013 1369 aa8.22□□□□□ -1.09
MACF1-218ENST00000484393 CPSF1Q10570 1443 aaKnown RBP8.22□□□□□ -1.09
MACF1-218ENST00000484393 C11orf95C9JLR9 678 aaPredicted RBP8.22□□□□□ -1.09
MACF1-218ENST00000484393 NR1I2O75469 434 aa8.22□□□□□ -1.09
MACF1-218ENST00000484393 HDGFL2Q7Z4V5 671 aaPredicted RBP8.22□□□□□ -1.09
MACF1-218ENST00000484393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.22□□□□□ -1.09
MACF1-218ENST00000484393 PARP9Q8IXQ6 854 aa8.22□□□□□ -1.09
MACF1-218ENST00000484393 RGS22Q8NE09 1264 aa8.22□□□□□ -1.09
MACF1-218ENST00000484393 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
MACF1-218ENST00000484393 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
MACF1-218ENST00000484393 SPATA31A1Q5TZJ5 1347 aa8.22□□□□□ -1.09
MACF1-218ENST00000484393 NRAPQ86VF7 1730 aa8.21□□□□□ -1.09
MACF1-218ENST00000484393 COL14A1Q05707 1796 aaKnown RBP8.21□□□□□ -1.1
MACF1-218ENST00000484393 APBB1O00213 710 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 SSTR3P32745 418 aaPredicted RBP8.21□□□□□ -1.1
MACF1-218ENST00000484393 PDE4DQ08499 809 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 NUTM1Q86Y26 1132 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 DNAJC5GQ8N7S2 189 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 STK32BQ9NY57 414 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 TERF2IPQ9NYB0 399 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 KIF7Q2M1P5 1343 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 ANKRD36BQ8N2N9 1353 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 THSD7AQ9UPZ6 1657 aa8.21□□□□□ -1.1
MACF1-218ENST00000484393 EDC4Q6P2E9 1401 aaKnown RBP8.2□□□□□ -1.1
MACF1-218ENST00000484393 GRIN3BO60391 1043 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 KDM4AO75164 1064 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 GRIPAP1Q4V328 841 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 ABTB2Q8N961 1025 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 CCDC7Q96M83 1385 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 MAP3K5Q99683 1374 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 SSH2Q76I76 1423 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
MACF1-218ENST00000484393 MAP2P11137 1827 aaKnown RBP8.19□□□□□ -1.1
MACF1-218ENST00000484393 SLIT3O75094 1523 aa8.19□□□□□ -1.1
MACF1-218ENST00000484393 SLC15A2Q16348 729 aa8.19□□□□□ -1.1
MACF1-218ENST00000484393 NME9Q86XW9 330 aa8.19□□□□□ -1.1
MACF1-218ENST00000484393 STRN4Q9NRL3 753 aa8.19□□□□□ -1.1
MACF1-218ENST00000484393 USP35Q9P2H5 1018 aa8.19□□□□□ -1.1
MACF1-218ENST00000484393 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
MACF1-218ENST00000484393 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
MACF1-218ENST00000484393 CASZ1Q86V15 1759 aa8.19□□□□□ -1.1
MACF1-218ENST00000484393 SHANK3Q9BYB0 1731 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 RGPD2P0DJD1 1756 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 S1PR4O95977 384 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 EVA1CP58658 441 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 TMCO4Q5TGY1 634 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 PRDM11Q9NQV5 511 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 WASHC2AQ641Q2 1341 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 TTC21AQ8NDW8 1320 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 ATP10DQ9P241 1426 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 NFAT5O94916 1531 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 LMO7Q8WWI1 1683 aa8.18□□□□□ -1.1
MACF1-218ENST00000484393 WNK3Q9BYP7 1800 aa8.17□□□□□ -1.1
MACF1-218ENST00000484393 BEGAINQ9BUH8 593 aa8.17□□□□□ -1.1
MACF1-218ENST00000484393 TRAIPQ9BWF2 469 aa8.17□□□□□ -1.1
MACF1-218ENST00000484393 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
MACF1-218ENST00000484393 BRD4O60885 1362 aaPredicted RBP8.17□□□□□ -1.1
MACF1-218ENST00000484393 COL18A1P39060 1754 aa8.17□□□□□ -1.1
MACF1-218ENST00000484393 OVOS2A0A0J9YW53 1432 aa8.16□□□□□ -1.1
MACF1-218ENST00000484393 E9PSI1 815 aa8.16□□□□□ -1.1
MACF1-218ENST00000484393 PPEF1O14829 653 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms