RNA–Protein interactions for RNA: ENST00000484298.5

ALMS1-204, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-204ENST00000484298 HVCN1Q96D96 273 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 GBP5Q96PP8 586 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 PLCD3Q8N3E9 789 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 DRC1Q96MC2 740 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 CTNNA3Q9UI47 895 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC144AA2RUR9 1427 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 CEP85LQ5SZL2 805 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 RAB3GAP2Q9H2M9 1393 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC96Q2M329 555 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 ANKRD24Q8TF21 1146 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 PRPF31Q8WWY3 499 aaKnown RBP10.94□□□□□ -0.66
ALMS1-204ENST00000484298 CAPZA3Q96KX2 299 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 FYB2Q5VWT5 728 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 MPNDQ8N594 471 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 RGS22Q8NE09 1264 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 FAM177BA6PVY3 158 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 CALCOCO2Q13137 446 aa10.94□□□□□ -0.66
ALMS1-204ENST00000484298 SMAP1Q8IYB5 467 aaPredicted RBP10.93□□□□□ -0.66
ALMS1-204ENST00000484298 CTAGE15A4D2H0 777 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 CTAGE8P0CG41 777 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 CTAGE4Q8IX94 777 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 SCAPERQ9BY12 1400 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 TTC21AQ8NDW8 1320 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 RUNDC1Q96C34 613 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 SEC63Q9UGP8 760 aaKnown RBP10.93□□□□□ -0.66
ALMS1-204ENST00000484298 BCAP29Q9UHQ4 241 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 GOLGA1Q92805 767 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 ZNF76P36508 570 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 MAP3K21Q5TCX8 1036 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC62Q6P9F0 684 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 UBAC1Q9BSL1 405 aa10.93□□□□□ -0.66
ALMS1-204ENST00000484298 EIF2AQ9BY44 585 aaKnown RBP10.93□□□□□ -0.66
ALMS1-204ENST00000484298 DNA2P51530 1060 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 TAOK1Q7L7X3 1001 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 BANK1Q8NDB2 785 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 SPATS2LQ9NUQ6 558 aaKnown RBP10.92□□□□□ -0.66
ALMS1-204ENST00000484298 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 BLOC1S2Q6QNY1 142 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC63Q8NA47 563 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 GCKP35557 465 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC144CPQ8IYA2 1237 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 CTAGE1Q96RT6 745 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 PAXIP1Q6ZW49 1069 aaPredicted RBP10.92□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC7Q96M83 1385 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 PDCD2Q16342 344 aaPredicted RBP10.92□□□□□ -0.66
ALMS1-204ENST00000484298 TTC16Q8NEE8 873 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 MCUR1Q96AQ8 359 aa10.92□□□□□ -0.66
ALMS1-204ENST00000484298 HMGB3O15347 200 aaKnown RBP10.91□□□□□ -0.66
ALMS1-204ENST00000484298 XAB2Q9HCS7 855 aaKnown RBP10.91□□□□□ -0.66
ALMS1-204ENST00000484298 TACC3Q9Y6A5 838 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 USP47Q96K76 1375 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 VPS8Q8N3P4 1428 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC196A0A1B0GTZ2 297 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 COG7P83436 770 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
ALMS1-204ENST00000484298 CCDC40Q4G0X9 1142 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 PRKRIP1Q9H875 184 aaPredicted RBP10.91□□□□□ -0.66
ALMS1-204ENST00000484298 AKAP2Q9Y2D5 859 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 TXNDC16Q9P2K2 825 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 USP25Q9UHP3 1055 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 MYO15BQ96JP2 1530 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 RIPK4P57078 832 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 AFAP1L2Q8N4X5 818 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 RASSF2P50749 326 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 TMEM266Q2M3C6 531 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 PFDN1O60925 122 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 GIGYF1O75420 1035 aaPredicted RBP10.91□□□□□ -0.66
ALMS1-204ENST00000484298 DDX19AQ9NUU7 478 aaKnown RBP10.91□□□□□ -0.66
ALMS1-204ENST00000484298 SLC4A8Q2Y0W8 1093 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 GNG11P61952 73 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 SPAG5Q96R06 1193 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 CAMK4Q16566 473 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 WRNQ14191 1432 aaPredicted RBP eCLIP10.91□□□□□ -0.669e-6■■■■■ 50.1
ALMS1-204ENST00000484298 TBC1D5Q92609 795 aa10.91□□□□□ -0.66
ALMS1-204ENST00000484298 NOP2P46087 812 aaKnown RBP10.9□□□□□ -0.66
ALMS1-204ENST00000484298 NBPF8Q3BBV2 869 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
ALMS1-204ENST00000484298 TRIM4Q9C037 500 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 Q9H521 79 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 USP37Q86T82 979 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 GSDMBQ8TAX9 411 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 ZNF428Q96B54 188 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 SEC62Q99442 399 aaKnown RBP10.9□□□□□ -0.66
ALMS1-204ENST00000484298 STRN4Q9NRL3 753 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.9□□□□□ -0.666e-7■■■□□ 18.2
ALMS1-204ENST00000484298 VAV2P52735 878 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 RNF10Q8N5U6 811 aaKnown RBP10.9□□□□□ -0.66
ALMS1-204ENST00000484298 SH3BP5O60239 455 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 ZEB2O60315 1214 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 VIMP08670 466 aaKnown RBP10.9□□□□□ -0.66
ALMS1-204ENST00000484298 AMPD3Q01432 767 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 KANK3Q6NY19 840 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 HDXQ7Z353 690 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 NKIRAS1Q9NYS0 192 aa10.9□□□□□ -0.66
ALMS1-204ENST00000484298 CETN3O15182 167 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms