RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 LINC00114Q6XXX2 140 aa10.67□□□□□ -0.7
CLK1-212ENST00000482590 PLPP7Q8NBV4 271 aa10.67□□□□□ -0.7
CLK1-212ENST00000482590 ZCCHC2Q9C0B9 1178 aaKnown RBP10.67□□□□□ -0.7
CLK1-212ENST00000482590 ABL2P42684 1182 aa10.66□□□□□ -0.7
CLK1-212ENST00000482590 SMTNP53814 917 aa10.66□□□□□ -0.7
CLK1-212ENST00000482590 FAM69CQ0P6D2 419 aa10.66□□□□□ -0.7
CLK1-212ENST00000482590 ZNF295-AS1Q8N0V1 137 aa10.66□□□□□ -0.7
CLK1-212ENST00000482590 NIFKQ9BYG3 293 aaKnown RBP10.66□□□□□ -0.7
CLK1-212ENST00000482590 KIAA0556O60303 1618 aa10.66□□□□□ -0.7
CLK1-212ENST00000482590 FIGNL1Q6PIW4 674 aa10.65□□□□□ -0.7
CLK1-212ENST00000482590 C1orf216Q8TAB5 229 aa10.65□□□□□ -0.7
CLK1-212ENST00000482590 HCN2Q9UL51 889 aa10.65□□□□□ -0.7
CLK1-212ENST00000482590 PCDHGC4Q9Y5F7 938 aa10.65□□□□□ -0.7
CLK1-212ENST00000482590 PPRC1Q5VV67 1664 aaKnown RBP10.65□□□□□ -0.7
CLK1-212ENST00000482590 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.71
CLK1-212ENST00000482590 ABCC2Q92887 1545 aa10.64□□□□□ -0.71
CLK1-212ENST00000482590 AMPD1P23109 780 aa10.64□□□□□ -0.71
CLK1-212ENST00000482590 WASHC4Q2M389 1173 aa10.64□□□□□ -0.71
CLK1-212ENST00000482590 NLRP8Q86W28 1048 aa10.64□□□□□ -0.71
CLK1-212ENST00000482590 AIDAQ96BJ3 306 aa10.64□□□□□ -0.71
CLK1-212ENST00000482590 SUV39H2Q9H5I1 410 aa10.64□□□□□ -0.71
CLK1-212ENST00000482590 ZCCHC11Q5TAX3 1644 aaKnown RBP10.64□□□□□ -0.71
CLK1-212ENST00000482590 PTPRGP23470 1445 aa10.64□□□□□ -0.71
CLK1-212ENST00000482590 TTBK1Q5TCY1 1321 aaPredicted RBP10.63□□□□□ -0.71
CLK1-212ENST00000482590 RAPGEF2Q9Y4G8 1499 aa10.63□□□□□ -0.71
CLK1-212ENST00000482590 TMEM229AB2RXF0 380 aa10.63□□□□□ -0.71
CLK1-212ENST00000482590 ARAFP10398 606 aa10.63□□□□□ -0.71
CLK1-212ENST00000482590 EPXP11678 715 aa10.63□□□□□ -0.71
CLK1-212ENST00000482590 ALYREFQ86V81 257 aaKnown RBP10.63□□□□□ -0.71
CLK1-212ENST00000482590 BTBD6Q96KE9 485 aa10.63□□□□□ -0.71
CLK1-212ENST00000482590 SERTAD1Q9UHV2 236 aa10.63□□□□□ -0.71
CLK1-212ENST00000482590 GLI2P10070 1586 aa10.62□□□□□ -0.71
CLK1-212ENST00000482590 ATXN7O15265 892 aaPredicted RBP10.62□□□□□ -0.71
CLK1-212ENST00000482590 SEMA3FQ13275 785 aa10.62□□□□□ -0.71
CLK1-212ENST00000482590 SLC4A9Q96Q91 983 aa10.62□□□□□ -0.71
CLK1-212ENST00000482590 IQSEC3Q9UPP2 1182 aaPredicted RBP10.62□□□□□ -0.71
CLK1-212ENST00000482590 USP3Q9Y6I4 520 aa10.62□□□□□ -0.71
CLK1-212ENST00000482590 UGGT2Q9NYU1 1516 aa10.62□□□□□ -0.71
CLK1-212ENST00000482590 NEURL1BA8MQ27 555 aa10.61□□□□□ -0.71
CLK1-212ENST00000482590 UBTFP17480 764 aaKnown RBP10.61□□□□□ -0.71
CLK1-212ENST00000482590 DISP1Q96F81 1524 aa10.61□□□□□ -0.71
CLK1-212ENST00000482590 UHRF1BP1LA0JNW5 1464 aa10.61□□□□□ -0.71
CLK1-212ENST00000482590 MAP3K4Q9Y6R4 1608 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 A0A1W2PNR3 127 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 CDK2AP1O14519 115 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 MAPTP10636 758 aaKnown RBP10.6□□□□□ -0.71
CLK1-212ENST00000482590 BAG6P46379 1132 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 TNP2Q05952 138 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 GRIN2CQ14957 1233 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 MTFR1Q15390 333 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 PLB1Q6P1J6 1458 aa10.6□□□□□ -0.71
CLK1-212ENST00000482590 UACAQ9BZF9 1416 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 DCDC2BA2VCK2 349 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 A6NJY4 79 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 PIK3CDO00329 1044 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 SOX11P35716 441 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 DGKGP49619 791 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 ARSJQ5FYB0 599 aaPredicted RBP10.59□□□□□ -0.71
CLK1-212ENST00000482590 KLF15Q9UIH9 416 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 PCDHGA11Q9Y5H2 935 aa10.59□□□□□ -0.71
CLK1-212ENST00000482590 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
CLK1-212ENST00000482590 GNB5O14775 395 aa10.58□□□□□ -0.72
CLK1-212ENST00000482590 CD33P20138 364 aa10.58□□□□□ -0.72
CLK1-212ENST00000482590 NBPF1Q3BBV0 1214 aa10.58□□□□□ -0.72
CLK1-212ENST00000482590 K7ELQ4 463 aaPredicted RBP10.57□□□□□ -0.72
CLK1-212ENST00000482590 MCM6Q14566 821 aa10.57□□□□□ -0.72
CLK1-212ENST00000482590 FAM182BQ5T319 152 aa10.57□□□□□ -0.72
CLK1-212ENST00000482590 ZIC5Q96T25 663 aa10.57□□□□□ -0.72
CLK1-212ENST00000482590 ZDHHC3Q9NYG2 299 aa10.57□□□□□ -0.72
CLK1-212ENST00000482590 CFAP43Q8NDM7 1665 aa10.57□□□□□ -0.72
CLK1-212ENST00000482590 KHNYNO15037 678 aaKnown RBP10.56□□□□□ -0.72
CLK1-212ENST00000482590 KDM5BQ9UGL1 1544 aa10.56□□□□□ -0.72
CLK1-212ENST00000482590 PIK3R2O00459 728 aa10.55□□□□□ -0.72
CLK1-212ENST00000482590 TATP17735 454 aaPredicted RBP10.55□□□□□ -0.72
CLK1-212ENST00000482590 ADH6P28332 368 aa10.55□□□□□ -0.72
CLK1-212ENST00000482590 CHSY3Q70JA7 882 aa10.55□□□□□ -0.72
CLK1-212ENST00000482590 FCHSD1Q86WN1 690 aa10.55□□□□□ -0.72
CLK1-212ENST00000482590 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
CLK1-212ENST00000482590 GOLGA3Q08378 1498 aa10.55□□□□□ -0.72
CLK1-212ENST00000482590 TEX14Q8IWB6 1497 aa10.55□□□□□ -0.72
CLK1-212ENST00000482590 EPRSP07814 1512 aaKnown RBP10.54□□□□□ -0.72
CLK1-212ENST00000482590 XP32Q5T750 250 aa10.54□□□□□ -0.72
CLK1-212ENST00000482590 AVENQ9NQS1 362 aaPredicted RBP10.54□□□□□ -0.72
CLK1-212ENST00000482590 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
CLK1-212ENST00000482590 C1QTNF9BB2RNN3 333 aa10.53□□□□□ -0.72
CLK1-212ENST00000482590 FURINP09958 794 aa10.53□□□□□ -0.72
CLK1-212ENST00000482590 FAM157BP0CG42 384 aa10.53□□□□□ -0.72
CLK1-212ENST00000482590 EML3Q32P44 896 aa10.52□□□□□ -0.73
CLK1-212ENST00000482590 CD163Q86VB7 1156 aa10.52□□□□□ -0.73
CLK1-212ENST00000482590 STRN4Q9NRL3 753 aa10.52□□□□□ -0.73
CLK1-212ENST00000482590 COG6Q9Y2V7 657 aa10.52□□□□□ -0.73
CLK1-212ENST00000482590 ABCA8O94911 1581 aa10.52□□□□□ -0.73
CLK1-212ENST00000482590 WDR7Q9Y4E6 1490 aa10.51□□□□□ -0.73
CLK1-212ENST00000482590 SKIP12755 728 aa10.51□□□□□ -0.73
CLK1-212ENST00000482590 TXLNAP40222 546 aa10.51□□□□□ -0.73
CLK1-212ENST00000482590 PCBP4P57723 403 aaKnown RBP10.51□□□□□ -0.73
CLK1-212ENST00000482590 SAMD5Q5TGI4 173 aa10.51□□□□□ -0.73
CLK1-212ENST00000482590 ZNF468Q5VIY5 522 aaPredicted RBP10.51□□□□□ -0.73
CLK1-212ENST00000482590 ZDHHC1Q8WTX9 485 aa10.51□□□□□ -0.73
CLK1-212ENST00000482590 ALG2Q9H553 416 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms