RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
SSBP1-210ENST00000481508 MBIPQ9NS73 344 aa13.84□□□□□ -0.19
SSBP1-210ENST00000481508 COL15A1P39059 1388 aa13.83□□□□□ -0.19
SSBP1-210ENST00000481508 NBPF26B4DH59 902 aa13.83□□□□□ -0.2
SSBP1-210ENST00000481508 CCDC27Q2M243 656 aa13.83□□□□□ -0.2
SSBP1-210ENST00000481508 NBPF10Q6P3W6 841 aaKnown RBP13.83□□□□□ -0.2
SSBP1-210ENST00000481508 NBPF15Q8N660 670 aa13.83□□□□□ -0.2
SSBP1-210ENST00000481508 STARD3NLO95772 234 aa13.82□□□□□ -0.2
SSBP1-210ENST00000481508 TRAPPC3LQ5T215 181 aa13.82□□□□□ -0.2
SSBP1-210ENST00000481508 FLAD1Q8NFF5 587 aa13.82□□□□□ -0.2
SSBP1-210ENST00000481508 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
SSBP1-210ENST00000481508 BABAM1Q9NWV8 329 aa13.82□□□□□ -0.2
SSBP1-210ENST00000481508 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
SSBP1-210ENST00000481508 BRCA1P38398 1863 aaKnown RBP13.81□□□□□ -0.2
SSBP1-210ENST00000481508 GYS1P13807 737 aa13.81□□□□□ -0.2
SSBP1-210ENST00000481508 EIF5P55010 431 aaKnown RBP13.81□□□□□ -0.2
SSBP1-210ENST00000481508 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-210ENST00000481508 TEX13AQ9BXU3 409 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-210ENST00000481508 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
SSBP1-210ENST00000481508 USP42Q9H9J4 1324 aaKnown RBP13.81□□□□□ -0.2
SSBP1-210ENST00000481508 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
SSBP1-210ENST00000481508 TSR2Q969E8 191 aaKnown RBP13.8□□□□□ -0.2
SSBP1-210ENST00000481508 BCL2L12Q9HB09 334 aa13.8□□□□□ -0.2
SSBP1-210ENST00000481508 ZNF330Q9Y3S2 320 aaPredicted RBP13.8□□□□□ -0.2
SSBP1-210ENST00000481508 NUP98P52948 1817 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 KIF13BQ9NQT8 1826 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 RFC4P35249 363 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 FKBP8Q14318 412 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 USPL1Q5W0Q7 1092 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 KLRG1Q96E93 195 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 ZNF521Q96K83 1311 aa13.79□□□□□ -0.2
SSBP1-210ENST00000481508 IL6STP40189 918 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-210ENST00000481508 GNAI1P63096 354 aa13.78□□□□□ -0.2
SSBP1-210ENST00000481508 PDIA6Q15084 440 aa13.78□□□□□ -0.2
SSBP1-210ENST00000481508 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
SSBP1-210ENST00000481508 TBC1D2BQ9UPU7 963 aa13.78□□□□□ -0.2
SSBP1-210ENST00000481508 NRXN2Q9P2S2 1712 aa13.78□□□□□ -0.2
SSBP1-210ENST00000481508 ANXA1P04083 346 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
SSBP1-210ENST00000481508 LRP10Q7Z4F1 713 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 TSPYL6Q8N831 410 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 JMYQ8N9B5 988 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 C8orf58Q8NAV2 365 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 NMRK2Q9NPI5 230 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 NARFQ9UHQ1 456 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
SSBP1-210ENST00000481508 IL16Q14005 1332 aa13.76□□□□□ -0.21
SSBP1-210ENST00000481508 FANCIQ9NVI1 1328 aa13.76□□□□□ -0.21
SSBP1-210ENST00000481508 ELL2O00472 640 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-210ENST00000481508 CAMTA2O94983 1202 aa13.76□□□□□ -0.21
SSBP1-210ENST00000481508 MMP10P09238 476 aa13.76□□□□□ -0.21
SSBP1-210ENST00000481508 MYL6BP14649 208 aa13.76□□□□□ -0.21
SSBP1-210ENST00000481508 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
SSBP1-210ENST00000481508 DDR1Q08345 913 aa13.76□□□□□ -0.21
SSBP1-210ENST00000481508 DUSP27Q5VZP5 1158 aa13.76□□□□□ -0.21
SSBP1-210ENST00000481508 TNRC6CQ9HCJ0 1690 aaKnown RBP13.75□□□□□ -0.21
SSBP1-210ENST00000481508 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
SSBP1-210ENST00000481508 WDR63Q8IWG1 891 aa13.75□□□□□ -0.21
SSBP1-210ENST00000481508 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
SSBP1-210ENST00000481508 SBF1O95248 1867 aa13.74□□□□□ -0.21
SSBP1-210ENST00000481508 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
SSBP1-210ENST00000481508 ANKRD36CQ5JPF3 1778 aa13.74□□□□□ -0.21
SSBP1-210ENST00000481508 ZPR1O75312 459 aa13.74□□□□□ -0.21
SSBP1-210ENST00000481508 TOMM70O94826 608 aa13.74□□□□□ -0.21
SSBP1-210ENST00000481508 TTLL7Q6ZT98 887 aa13.74□□□□□ -0.21
SSBP1-210ENST00000481508 ARFGEF1Q9Y6D6 1849 aa13.74□□□□□ -0.21
SSBP1-210ENST00000481508 A0A087WZG4 1122 aa13.73□□□□□ -0.21
SSBP1-210ENST00000481508 HAX1O00165 279 aa13.73□□□□□ -0.21
SSBP1-210ENST00000481508 TM4SF1P30408 202 aa13.73□□□□□ -0.21
SSBP1-210ENST00000481508 NFIXQ14938 502 aa13.73□□□□□ -0.21
SSBP1-210ENST00000481508 TBC1D9BQ66K14 1250 aa13.73□□□□□ -0.21
SSBP1-210ENST00000481508 CHPF2Q9P2E5 772 aa13.73□□□□□ -0.21
SSBP1-210ENST00000481508 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
SSBP1-210ENST00000481508 ERBB4Q15303 1308 aa13.72□□□□□ -0.21
SSBP1-210ENST00000481508 POLRMTO00411 1230 aaKnown RBP13.72□□□□□ -0.21
SSBP1-210ENST00000481508 HLFQ16534 295 aa13.72□□□□□ -0.21
SSBP1-210ENST00000481508 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
SSBP1-210ENST00000481508 NLGN1Q8N2Q7 840 aa13.72□□□□□ -0.21
SSBP1-210ENST00000481508 CD2APQ9Y5K6 639 aa13.72□□□□□ -0.21
SSBP1-210ENST00000481508 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
SSBP1-210ENST00000481508 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
SSBP1-210ENST00000481508 HOXB7P09629 217 aa13.71□□□□□ -0.21
SSBP1-210ENST00000481508 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
SSBP1-210ENST00000481508 BICDL1Q6ZP65 573 aa13.71□□□□□ -0.21
SSBP1-210ENST00000481508 CDCA7LQ96GN5 454 aa13.71□□□□□ -0.21
SSBP1-210ENST00000481508 CARMIL3Q8ND23 1372 aa13.71□□□□□ -0.22
SSBP1-210ENST00000481508 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
SSBP1-210ENST00000481508 EXOSC9Q06265 439 aaKnown RBP13.7□□□□□ -0.22
SSBP1-210ENST00000481508 ZBTB3Q9H5J0 574 aa13.7□□□□□ -0.22
SSBP1-210ENST00000481508 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
SSBP1-210ENST00000481508 CACNA1FO60840 1977 aa13.7□□□□□ -0.22
SSBP1-210ENST00000481508 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
SSBP1-210ENST00000481508 MAP3K15Q6ZN16 1313 aa13.69□□□□□ -0.22
SSBP1-210ENST00000481508 DLEC1Q9Y238 1755 aa13.69□□□□□ -0.22
SSBP1-210ENST00000481508 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
SSBP1-210ENST00000481508 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
SSBP1-210ENST00000481508 XAGE3Q8WTP9 111 aa13.69□□□□□ -0.22
SSBP1-210ENST00000481508 AIMP1Q12904 312 aaKnown RBP13.68□□□□□ -0.22
SSBP1-210ENST00000481508 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 259.6 ms