RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CCDC93Q567U6 631 aa25.03■■□□□ 1.6
SDF4-206ENST00000478938 AXDND1Q5T1B0 1012 aaPredicted RBP25.03■■□□□ 1.6
SDF4-206ENST00000478938 OSBPL3Q9H4L5 887 aa25.03■■□□□ 1.6
SDF4-206ENST00000478938 ARGLU1Q9NWB6 273 aaPredicted RBP25.03■■□□□ 1.6
SDF4-206ENST00000478938 ORC3Q9UBD5 711 aaPredicted RBP25.03■■□□□ 1.6
SDF4-206ENST00000478938 RUFY3Q7L099 469 aa25.02■■□□□ 1.6
SDF4-206ENST00000478938 C8orf58Q8NAV2 365 aa25.02■■□□□ 1.6
SDF4-206ENST00000478938 MBIPQ9NS73 344 aa25.02■■□□□ 1.6
SDF4-206ENST00000478938 LARGE1O95461 756 aa25.02■■□□□ 1.6
SDF4-206ENST00000478938 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
SDF4-206ENST00000478938 GJB2P29033 226 aa25.01■■□□□ 1.6
SDF4-206ENST00000478938 FAM173BQ6P4H8 233 aa25.01■■□□□ 1.59
SDF4-206ENST00000478938 MAP3K4Q9Y6R4 1608 aa25.01■■□□□ 1.59
SDF4-206ENST00000478938 SMC1AQ14683 1233 aaKnown RBP25■■□□□ 1.59
SDF4-206ENST00000478938 RIMBP3CA6NJZ7 1639 aa25■■□□□ 1.59
SDF4-206ENST00000478938 RIMBP3BA6NNM3 1639 aa25■■□□□ 1.59
SDF4-206ENST00000478938 RIMBP3Q9UFD9 1639 aa25■■□□□ 1.59
SDF4-206ENST00000478938 BANK1Q8NDB2 785 aa25■■□□□ 1.59
SDF4-206ENST00000478938 IL17RAQ96F46 866 aa25■■□□□ 1.59
SDF4-206ENST00000478938 NSD2O96028 1365 aa25■■□□□ 1.59
SDF4-206ENST00000478938 ELP1O95163 1332 aa25■■□□□ 1.59
SDF4-206ENST00000478938 MEIS3Q99687 375 aa25■■□□□ 1.59
SDF4-206ENST00000478938 KIF2AO00139 706 aaPredicted RBP24.99■■□□□ 1.59
SDF4-206ENST00000478938 TBC1D8O95759 1140 aa24.99■■□□□ 1.59
SDF4-206ENST00000478938 CCDC83Q8IWF9 413 aa24.99■■□□□ 1.59
SDF4-206ENST00000478938 UBXN4Q92575 508 aa24.99■■□□□ 1.59
SDF4-206ENST00000478938 KIF24Q5T7B8 1368 aa24.99■■□□□ 1.59
SDF4-206ENST00000478938 PRKAR2BP31323 418 aa24.99■■□□□ 1.59
SDF4-206ENST00000478938 E2F4Q16254 413 aa24.99■■□□□ 1.59
SDF4-206ENST00000478938 MSH6P52701 1360 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 ATP2B1P20020 1258 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 AK7Q96M32 723 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 LIMCH1Q9UPQ0 1083 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 ARHGAP5Q13017 1502 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 HSPA4P34932 840 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 FERMT3Q86UX7 667 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 TTC14Q96N46 770 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 EPC1Q9H2F5 836 aa24.98■■□□□ 1.59
SDF4-206ENST00000478938 DIAPH1O60610 1272 aaKnown RBP24.97■■□□□ 1.59
SDF4-206ENST00000478938 CPA1P15085 419 aa24.97■■□□□ 1.59
SDF4-206ENST00000478938 UNC5CLQ8IV45 518 aa24.97■■□□□ 1.59
SDF4-206ENST00000478938 ZNF622Q969S3 477 aaKnown RBP eCLIP24.97■■□□□ 1.59
SDF4-206ENST00000478938 SSH2Q76I76 1423 aa24.97■■□□□ 1.59
SDF4-206ENST00000478938 MRFAP1L1Q96HT8 127 aa24.97■■□□□ 1.59
SDF4-206ENST00000478938 PPP1R13BQ96KQ4 1090 aa24.97■■□□□ 1.59
SDF4-206ENST00000478938 E4F1Q66K89 784 aaPredicted RBP24.96■■□□□ 1.59
SDF4-206ENST00000478938 CLSTN2Q9H4D0 955 aa24.96■■□□□ 1.59
SDF4-206ENST00000478938 GOLGA6L19H0YKK7 550 aa24.96■■□□□ 1.59
SDF4-206ENST00000478938 NOM1Q5C9Z4 860 aaKnown RBP24.96■■□□□ 1.59
SDF4-206ENST00000478938 ADAM21Q9UKJ8 722 aa24.96■■□□□ 1.59
SDF4-206ENST00000478938 MAGEA9P43362 315 aa24.95■■□□□ 1.58
SDF4-206ENST00000478938 LRRC7Q96NW7 1537 aa24.95■■□□□ 1.58
SDF4-206ENST00000478938 ACTN2P35609 894 aa24.95■■□□□ 1.58
SDF4-206ENST00000478938 FOXR1Q6PIV2 292 aa24.95■■□□□ 1.58
SDF4-206ENST00000478938 CEP83Q9Y592 693 aa24.95■■□□□ 1.58
SDF4-206ENST00000478938 QRICH2Q9H0J4 1663 aa24.94■■□□□ 1.58
SDF4-206ENST00000478938 KRT85P78386 507 aa24.94■■□□□ 1.58
SDF4-206ENST00000478938 SARM1Q6SZW1 724 aa24.94■■□□□ 1.58
SDF4-206ENST00000478938 RBM43Q6ZSC3 357 aaKnown RBP24.94■■□□□ 1.58
SDF4-206ENST00000478938 CCDC172P0C7W6 258 aa24.94■■□□□ 1.58
SDF4-206ENST00000478938 GNAI1P63096 354 aa24.94■■□□□ 1.58
SDF4-206ENST00000478938 C11orf57Q6ZUT1 292 aaPredicted RBP24.94■■□□□ 1.58
SDF4-206ENST00000478938 PHACTR3Q96KR7 559 aa24.94■■□□□ 1.58
SDF4-206ENST00000478938 SNX14Q9Y5W7 946 aa24.94■■□□□ 1.58
SDF4-206ENST00000478938 NR1I2O75469 434 aa24.93■■□□□ 1.58
SDF4-206ENST00000478938 IQCB1Q15051 598 aa24.93■■□□□ 1.58
SDF4-206ENST00000478938 EXOC4Q96A65 974 aa24.93■■□□□ 1.58
SDF4-206ENST00000478938 KCND1Q9NSA2 647 aa24.93■■□□□ 1.58
SDF4-206ENST00000478938 PLCH2O75038 1416 aa24.93■■□□□ 1.58
SDF4-206ENST00000478938 IQUBQ8NA54 791 aa24.93■■□□□ 1.58
SDF4-206ENST00000478938 DEF6Q9H4E7 631 aa24.93■■□□□ 1.58
SDF4-206ENST00000478938 GOLGA6L4A6NEF3 574 aa24.92■■□□□ 1.58
SDF4-206ENST00000478938 DDX19AQ9NUU7 478 aaKnown RBP24.92■■□□□ 1.58
SDF4-206ENST00000478938 TTC21BQ7Z4L5 1316 aa24.92■■□□□ 1.58
SDF4-206ENST00000478938 CC2D1AQ6P1N0 951 aaPredicted RBP24.92■■□□□ 1.58
SDF4-206ENST00000478938 RASEFQ8IZ41 740 aa24.92■■□□□ 1.58
SDF4-206ENST00000478938 CNPY4Q8N129 248 aa24.92■■□□□ 1.58
SDF4-206ENST00000478938 ANKRD65E5RJM6 399 aa24.91■■□□□ 1.58
SDF4-206ENST00000478938 MNS1Q8NEH6 495 aa24.91■■□□□ 1.58
SDF4-206ENST00000478938 ZC3H13Q5T200 1668 aaKnown RBP24.91■■□□□ 1.58
SDF4-206ENST00000478938 SALL3Q9BXA9 1300 aa24.91■■□□□ 1.58
SDF4-206ENST00000478938 EIF3CLB5ME19 914 aaKnown RBP24.91■■□□□ 1.58
SDF4-206ENST00000478938 EIF3CQ99613 913 aaKnown RBP24.91■■□□□ 1.58
SDF4-206ENST00000478938 TFIP11Q9UBB9 837 aaKnown RBP24.91■■□□□ 1.58
SDF4-206ENST00000478938 UGGT1Q9NYU2 1555 aa24.9■■□□□ 1.58
SDF4-206ENST00000478938 H3BQF6 201 aa24.9■■□□□ 1.58
SDF4-206ENST00000478938 TADA3O75528 432 aa24.9■■□□□ 1.58
SDF4-206ENST00000478938 CDC37L1Q7L3B6 337 aa24.9■■□□□ 1.58
SDF4-206ENST00000478938 ATP8B1O43520 1251 aa24.9■■□□□ 1.58
SDF4-206ENST00000478938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.89■■□□□ 1.583e-6■■■□□ 17.9
SDF4-206ENST00000478938 GNAI3P08754 354 aa24.89■■□□□ 1.58
SDF4-206ENST00000478938 PSD3Q9NYI0 1048 aa24.89■■□□□ 1.58
SDF4-206ENST00000478938 A0A087WWV3 80 aa24.89■■□□□ 1.57
SDF4-206ENST00000478938 NFE2L2Q16236 605 aa24.89■■□□□ 1.57
SDF4-206ENST00000478938 LEKR1Q6ZMV7 388 aa24.89■■□□□ 1.57
SDF4-206ENST00000478938 DNAI1Q9UI46 699 aa24.89■■□□□ 1.57
SDF4-206ENST00000478938 TUBGCP6Q96RT7 1819 aa24.89■■□□□ 1.57
SDF4-206ENST00000478938 FANCAO15360 1455 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 FCHSD2O94868 740 aa24.88■■□□□ 1.57
SDF4-206ENST00000478938 HMOX1P09601 288 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms