RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 CHMP7Q8WUX9 453 aaPredicted RBP8.9□□□□□ -0.98
UBR3-209ENST00000477461 C7orf43Q8WVR3 580 aa8.9□□□□□ -0.98
UBR3-209ENST00000477461 PPP1R12BO60237 982 aaPredicted RBP8.89□□□□□ -0.99
UBR3-209ENST00000477461 FAM157BP0CG42 384 aa8.89□□□□□ -0.99
UBR3-209ENST00000477461 SFSWAPQ12872 951 aaKnown RBP8.89□□□□□ -0.99
UBR3-209ENST00000477461 SUZ12Q15022 739 aaKnown RBP8.89□□□□□ -0.99
UBR3-209ENST00000477461 SUV39H2Q9H5I1 410 aa8.89□□□□□ -0.99
UBR3-209ENST00000477461 MAFBQ9Y5Q3 323 aaPredicted RBP8.89□□□□□ -0.99
UBR3-209ENST00000477461 DKK1O94907 266 aa8.88□□□□□ -0.99
UBR3-209ENST00000477461 HOXB4P17483 251 aaPredicted RBP8.88□□□□□ -0.99
UBR3-209ENST00000477461 ADH6P28332 368 aa8.88□□□□□ -0.99
UBR3-209ENST00000477461 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
UBR3-209ENST00000477461 FCHSD1Q86WN1 690 aa8.88□□□□□ -0.99
UBR3-209ENST00000477461 HSH2DQ96JZ2 352 aa8.88□□□□□ -0.99
UBR3-209ENST00000477461 HINFPQ9BQA5 517 aa8.88□□□□□ -0.99
UBR3-209ENST00000477461 PHACTR1Q9C0D0 580 aa8.88□□□□□ -0.99
UBR3-209ENST00000477461 ATAD2Q6PL18 1390 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 EFSO43281 561 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 ITGB2P05107 769 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 COL8A1P27658 744 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 FAM182BQ5T319 152 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 SAMD5Q5TGI4 173 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 LINC00114Q6XXX2 140 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 SIX5Q8N196 739 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 SCG3Q8WXD2 468 aaKnown RBP8.87□□□□□ -0.99
UBR3-209ENST00000477461 PPP1R12CQ9BZL4 782 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
UBR3-209ENST00000477461 C21orf2O43822 256 aa8.86□□□□□ -0.99
UBR3-209ENST00000477461 LMOD1P29536 600 aaPredicted RBP8.86□□□□□ -0.99
UBR3-209ENST00000477461 CRTC2Q53ET0 693 aaPredicted RBP8.86□□□□□ -0.99
UBR3-209ENST00000477461 LARP1Q6PKG0 1096 aaKnown RBP8.86□□□□□ -0.99
UBR3-209ENST00000477461 CHSY3Q70JA7 882 aa8.86□□□□□ -0.99
UBR3-209ENST00000477461 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
UBR3-209ENST00000477461 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
UBR3-209ENST00000477461 CEP63Q96MT8 703 aa8.86□□□□□ -0.99
UBR3-209ENST00000477461 ZNF777Q9ULD5 760 aaPredicted RBP8.86□□□□□ -0.99
UBR3-209ENST00000477461 KRBA1A5PL33 1030 aa8.85□□□□□ -0.99
UBR3-209ENST00000477461 MSTNO14793 375 aa8.85□□□□□ -0.99
UBR3-209ENST00000477461 IGHA1P01876 353 aa8.85□□□□□ -0.99
UBR3-209ENST00000477461 SEC13P55735 322 aa8.85□□□□□ -0.99
UBR3-209ENST00000477461 SYT9Q86SS6 491 aa8.85□□□□□ -0.99
UBR3-209ENST00000477461 SLC30A3Q99726 388 aa8.85□□□□□ -0.99
UBR3-209ENST00000477461 A6NJR5 290 aa8.84□□□□□ -0.99
UBR3-209ENST00000477461 M0R2N6 131 aa8.84□□□□□ -0.99
UBR3-209ENST00000477461 DPYDQ12882 1025 aa8.84□□□□□ -0.99
UBR3-209ENST00000477461 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
UBR3-209ENST00000477461 ZNF468Q5VIY5 522 aaPredicted RBP8.84□□□□□ -0.99
UBR3-209ENST00000477461 RAB44Q7Z6P3 723 aaPredicted RBP8.84□□□□□ -0.99
UBR3-209ENST00000477461 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
UBR3-209ENST00000477461 KANK4Q5T7N3 995 aaPredicted RBP8.83□□□□□ -1
UBR3-209ENST00000477461 ALDH16A1Q8IZ83 802 aa8.83□□□□□ -1
UBR3-209ENST00000477461 LAMC2Q13753 1193 aa8.82□□□□□ -1
UBR3-209ENST00000477461 C1orf53Q5VUE5 145 aa8.82□□□□□ -1
UBR3-209ENST00000477461 SUSD3Q96L08 255 aa8.82□□□□□ -1
UBR3-209ENST00000477461 VRTNQ9H8Y1 702 aa8.82□□□□□ -1
UBR3-209ENST00000477461 BRD7Q9NPI1 651 aa8.82□□□□□ -1
UBR3-209ENST00000477461 GNB5O14775 395 aa8.81□□□□□ -1
UBR3-209ENST00000477461 DGKGP49619 791 aa8.81□□□□□ -1
UBR3-209ENST00000477461 PTK7Q13308 1070 aa8.81□□□□□ -1
UBR3-209ENST00000477461 AVENQ9NQS1 362 aaPredicted RBP8.81□□□□□ -1
UBR3-209ENST00000477461 ANKIB1Q9P2G1 1089 aa8.81□□□□□ -1
UBR3-209ENST00000477461 SPEM2Q0P670 501 aa8.8□□□□□ -1
UBR3-209ENST00000477461 C2orf49Q9BVC5 232 aaPredicted RBP8.8□□□□□ -1
UBR3-209ENST00000477461 ALAS2P22557 587 aa8.79□□□□□ -1
UBR3-209ENST00000477461 RFX1P22670 979 aa8.79□□□□□ -1
UBR3-209ENST00000477461 HIRAP54198 1017 aaPredicted RBP8.79□□□□□ -1
UBR3-209ENST00000477461 ANKMY2Q8IV38 441 aa8.79□□□□□ -1
UBR3-209ENST00000477461 KCNH4Q9UQ05 1017 aa8.79□□□□□ -1
UBR3-209ENST00000477461 GPC6Q9Y625 555 aaPredicted RBP8.79□□□□□ -1
UBR3-209ENST00000477461 ELOA3CA0A087WX78 387 aaPredicted RBP8.78□□□□□ -1
UBR3-209ENST00000477461 ELOA3DA6NLF2 546 aaPredicted RBP8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L15C9J2P7 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L10C9JJH3 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L13C9JLJ4 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L12C9JPN9 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L11C9JVI0 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L21D6R901 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L18D6R9N7 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L22D6RA61 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L17D6RBQ6 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L19D6RCP7 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L20D6RJB6 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 PROCP04070 461 aa8.78□□□□□ -1
UBR3-209ENST00000477461 USP17L24Q0WX57 530 aa8.78□□□□□ -1
UBR3-209ENST00000477461 ELOA3BQ3SY89 546 aa8.78□□□□□ -1
UBR3-209ENST00000477461 ELOA3Q8NG57 546 aa8.78□□□□□ -1
UBR3-209ENST00000477461 IGFLR1Q9H665 355 aa8.78□□□□□ -1
UBR3-209ENST00000477461 TYRO3Q06418 890 aa8.77□□□□□ -1.01
UBR3-209ENST00000477461 TBC1D8BQ0IIM8 1120 aa8.77□□□□□ -1.01
UBR3-209ENST00000477461 POTEAQ6S8J7 498 aa8.77□□□□□ -1.01
UBR3-209ENST00000477461 BHMTQ93088 406 aa8.77□□□□□ -1.01
UBR3-209ENST00000477461 TRIM11Q96F44 468 aa8.77□□□□□ -1.01
UBR3-209ENST00000477461 PLVAPQ9BX97 442 aa8.77□□□□□ -1.01
UBR3-209ENST00000477461 PIK3R2O00459 728 aa8.76□□□□□ -1.01
UBR3-209ENST00000477461 SIN3BO75182 1162 aa8.76□□□□□ -1.01
UBR3-209ENST00000477461 C8orf86Q6ZUL3 223 aa8.76□□□□□ -1.01
UBR3-209ENST00000477461 BTLAQ7Z6A9 289 aa8.76□□□□□ -1.01
UBR3-209ENST00000477461 C1QTNF9BB2RNN3 333 aa8.75□□□□□ -1.01
UBR3-209ENST00000477461 CFAP70Q5T0N1 1121 aa8.75□□□□□ -1.01
UBR3-209ENST00000477461 STAG2Q8N3U4 1231 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms