RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 RTCBQ9Y3I0 505 aaKnown RBP8.02□□□□□ -1.13
CPSF7-210ENST00000474684 CD2APQ9Y5K6 639 aa8.02□□□□□ -1.13
CPSF7-210ENST00000474684 USP42Q9H9J4 1324 aaKnown RBP8.02□□□□□ -1.13
CPSF7-210ENST00000474684 COL15A1P39059 1388 aa8.01□□□□□ -1.13
CPSF7-210ENST00000474684 CARMIL3Q8ND23 1372 aa8.01□□□□□ -1.13
CPSF7-210ENST00000474684 U2SURPO15042 1029 aaKnown RBP8.01□□□□□ -1.13
CPSF7-210ENST00000474684 RPS6KA4O75676 772 aa8.01□□□□□ -1.13
CPSF7-210ENST00000474684 DDR1Q08345 913 aa8.01□□□□□ -1.13
CPSF7-210ENST00000474684 INTS5Q6P9B9 1019 aaKnown RBP8.01□□□□□ -1.13
CPSF7-210ENST00000474684 ZBTB1Q9Y2K1 713 aa8.01□□□□□ -1.13
CPSF7-210ENST00000474684 TNRC6CQ9HCJ0 1690 aaKnown RBP8.01□□□□□ -1.13
CPSF7-210ENST00000474684 SOS1Q07889 1333 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-210ENST00000474684 FKBP8Q14318 412 aa8□□□□□ -1.13
CPSF7-210ENST00000474684 RC3H1Q5TC82 1133 aaKnown RBP8□□□□□ -1.13
CPSF7-210ENST00000474684 SLX4Q8IY92 1834 aa8□□□□□ -1.13
CPSF7-210ENST00000474684 ANKRD36CQ5JPF3 1778 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 CEP350Q5VT06 3117 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 PPP2R1AP30153 589 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 PRKAR2BP31323 418 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 GOLGA2Q08379 1002 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 TRAPPC3LQ5T215 181 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 PDCD7Q8N8D1 485 aaKnown RBP7.99□□□□□ -1.13
CPSF7-210ENST00000474684 PHACTR3Q96KR7 559 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 RSPH6AQ9H0K4 717 aa7.99□□□□□ -1.13
CPSF7-210ENST00000474684 LAMB2P55268 1798 aa7.98□□□□□ -1.13
CPSF7-210ENST00000474684 CYP19A1P11511 503 aaPredicted RBP7.98□□□□□ -1.13
CPSF7-210ENST00000474684 RFC4P35249 363 aa7.98□□□□□ -1.13
CPSF7-210ENST00000474684 MKRN3Q13064 507 aaKnown RBP7.98□□□□□ -1.13
CPSF7-210ENST00000474684 IL17REQ8NFR9 667 aa7.98□□□□□ -1.13
CPSF7-210ENST00000474684 BCL2L12Q9HB09 334 aa7.98□□□□□ -1.13
CPSF7-210ENST00000474684 CCDC87Q9NVE4 849 aa7.98□□□□□ -1.13
CPSF7-210ENST00000474684 WDR90Q96KV7 1748 aa7.98□□□□□ -1.13
CPSF7-210ENST00000474684 HEG1Q9ULI3 1381 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 A0A0G2JLW4 131 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 POTEB3A0JP26 581 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 POLRMTO00411 1230 aaKnown RBP7.97□□□□□ -1.13
CPSF7-210ENST00000474684 KCNQ3O43525 872 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 GRIN3BO60391 1043 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 DPEP1P16444 411 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 USPL1Q5W0Q7 1092 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 POTEBQ6S5H4 581 aa7.97□□□□□ -1.13
CPSF7-210ENST00000474684 ZNF526Q8TF50 670 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-210ENST00000474684 ZNF496Q96IT1 587 aaPredicted RBP7.97□□□□□ -1.13
CPSF7-210ENST00000474684 GNAT3A8MTJ3 354 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 GIGYF1O75420 1035 aaPredicted RBP7.96□□□□□ -1.14
CPSF7-210ENST00000474684 KCNA3P22001 575 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 HMGB2P26583 209 aaKnown RBP7.96□□□□□ -1.14
CPSF7-210ENST00000474684 CHRNA5P30532 468 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 C1QTNF8P60827 252 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 DCAF8Q5TAQ9 597 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 NLGN1Q8N2Q7 840 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 GAS2L2Q8NHY3 880 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 BCS1LQ9Y276 419 aa7.96□□□□□ -1.14
CPSF7-210ENST00000474684 SENP3-EIF4A1A0A087X0R7 540 aa7.95□□□□□ -1.14
CPSF7-210ENST00000474684 PRAMEF22A3QJZ6 481 aa7.95□□□□□ -1.14
CPSF7-210ENST00000474684 CANXP27824 592 aaKnown RBP7.95□□□□□ -1.14
CPSF7-210ENST00000474684 PIP4K2AP48426 406 aaPredicted RBP7.95□□□□□ -1.14
CPSF7-210ENST00000474684 DCTN1Q14203 1278 aa7.95□□□□□ -1.14
CPSF7-210ENST00000474684 NFIXQ14938 502 aa7.95□□□□□ -1.14
CPSF7-210ENST00000474684 ZNF467Q7Z7K2 595 aaPredicted RBP7.95□□□□□ -1.14
CPSF7-210ENST00000474684 PARP3Q9Y6F1 533 aa7.95□□□□□ -1.14
CPSF7-210ENST00000474684 TAF1P21675 1872 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
CPSF7-210ENST00000474684 PYGBP11216 843 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 TM4SF1P30408 202 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
CPSF7-210ENST00000474684 TEFQ10587 303 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 ZNF790Q6PG37 636 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 MCM10Q7L590 875 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 TTC5Q8N0Z6 440 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 NARFQ9UHQ1 456 aa7.94□□□□□ -1.14
CPSF7-210ENST00000474684 FCHSD2O94868 740 aa7.93□□□□□ -1.14
CPSF7-210ENST00000474684 EIF5P55010 431 aaKnown RBP7.93□□□□□ -1.14
CPSF7-210ENST00000474684 TGFB2P61812 414 aa7.93□□□□□ -1.14
CPSF7-210ENST00000474684 RASSF7Q02833 373 aa7.93□□□□□ -1.14
CPSF7-210ENST00000474684 VSIG10Q8N0Z9 540 aa7.93□□□□□ -1.14
CPSF7-210ENST00000474684 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
CPSF7-210ENST00000474684 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
CPSF7-210ENST00000474684 CFAP53Q96M91 514 aa7.93□□□□□ -1.14
CPSF7-210ENST00000474684 PCDHB8Q9UN66 801 aa7.93□□□□□ -1.14
CPSF7-210ENST00000474684 ZNF330Q9Y3S2 320 aaPredicted RBP7.93□□□□□ -1.14
CPSF7-210ENST00000474684 KIF3CO14782 793 aa7.92□□□□□ -1.14
CPSF7-210ENST00000474684 ZPR1O75312 459 aa7.92□□□□□ -1.14
CPSF7-210ENST00000474684 TBC1D9BQ66K14 1250 aa7.92□□□□□ -1.14
CPSF7-210ENST00000474684 BICDL1Q6ZP65 573 aa7.92□□□□□ -1.14
CPSF7-210ENST00000474684 GPBP1L1Q9HC44 474 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-210ENST00000474684 TBC1D2BQ9UPU7 963 aa7.92□□□□□ -1.14
CPSF7-210ENST00000474684 BTBD11A6QL63 1104 aa7.91□□□□□ -1.14
CPSF7-210ENST00000474684 CAMTA2O94983 1202 aa7.91□□□□□ -1.14
CPSF7-210ENST00000474684 A1BGP04217 495 aa7.91□□□□□ -1.14
CPSF7-210ENST00000474684 SERPINB2P05120 415 aa7.91□□□□□ -1.14
CPSF7-210ENST00000474684 PRELPP51888 382 aa7.91□□□□□ -1.14
CPSF7-210ENST00000474684 FMNL2Q96PY5 1086 aa7.91□□□□□ -1.14
CPSF7-210ENST00000474684 THUMPD2Q9BTF0 503 aaKnown RBP7.91□□□□□ -1.14
CPSF7-210ENST00000474684 DDX60Q8IY21 1712 aaKnown RBP7.91□□□□□ -1.14
CPSF7-210ENST00000474684 NBPF26B4DH59 902 aa7.9□□□□□ -1.14
CPSF7-210ENST00000474684 HOXB1P14653 301 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-210ENST00000474684 IL6STP40189 918 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-210ENST00000474684 PRR5LQ6MZQ0 368 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms