RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TTLL7Q6ZT98 887 aa22.56■■□□□ 1.2
SMC4-211ENST00000469858 EXOC6BQ9Y2D4 811 aa22.56■■□□□ 1.2
SMC4-211ENST00000469858 STARD3NLO95772 234 aa22.55■■□□□ 1.2
SMC4-211ENST00000469858 PPP1R42Q7Z4L9 355 aa22.55■■□□□ 1.2
SMC4-211ENST00000469858 SLC4A9Q96Q91 983 aa22.55■■□□□ 1.2
SMC4-211ENST00000469858 TJP1Q07157 1748 aa22.55■■□□□ 1.2
SMC4-211ENST00000469858 SMARCA5O60264 1052 aaPredicted RBP22.54■■□□□ 1.2
SMC4-211ENST00000469858 ZNF330Q9Y3S2 320 aaPredicted RBP22.54■■□□□ 1.2
SMC4-211ENST00000469858 UTYO14607 1347 aa22.53■■□□□ 1.2
SMC4-211ENST00000469858 AFF2P51816 1311 aa22.53■■□□□ 1.2
SMC4-211ENST00000469858 SRGAP3O43295 1099 aa22.53■■□□□ 1.2
SMC4-211ENST00000469858 GCKRQ14397 625 aa22.53■■□□□ 1.2
SMC4-211ENST00000469858 SSH3Q8TE77 659 aa22.53■■□□□ 1.2
SMC4-211ENST00000469858 HDAC5Q9UQL6 1122 aa22.53■■□□□ 1.2
SMC4-211ENST00000469858 THSD7AQ9UPZ6 1657 aa22.53■■□□□ 1.2
SMC4-211ENST00000469858 NPM2Q86SE8 214 aaKnown RBP22.52■■□□□ 1.2
SMC4-211ENST00000469858 IBTKQ9P2D0 1353 aaPredicted RBP22.51■■□□□ 1.19
SMC4-211ENST00000469858 ATP5J2-PTCD1G3V325 749 aa22.51■■□□□ 1.19
SMC4-211ENST00000469858 POLA2Q14181 598 aa22.51■■□□□ 1.19
SMC4-211ENST00000469858 ZBTB3Q9H5J0 574 aa22.51■■□□□ 1.19
SMC4-211ENST00000469858 C16orf71Q8IYS4 520 aaPredicted RBP22.5■■□□□ 1.19
SMC4-211ENST00000469858 SUCLG2Q96I99 432 aa22.5■■□□□ 1.19
SMC4-211ENST00000469858 CYP19A1P11511 503 aaPredicted RBP22.5■■□□□ 1.19
SMC4-211ENST00000469858 KCNQ2O43526 872 aa22.49■■□□□ 1.19
SMC4-211ENST00000469858 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
SMC4-211ENST00000469858 PLEKHM2Q8IWE5 1019 aa22.49■■□□□ 1.19
SMC4-211ENST00000469858 GJD4Q96KN9 370 aaPredicted RBP22.49■■□□□ 1.19
SMC4-211ENST00000469858 LRRCC1Q9C099 1032 aa22.49■■□□□ 1.19
SMC4-211ENST00000469858 MTX1Q13505 466 aa22.48■■□□□ 1.19
SMC4-211ENST00000469858 OTUD7AQ8TE49 926 aaPredicted RBP22.48■■□□□ 1.19
SMC4-211ENST00000469858 KAZALD1Q96I82 304 aa22.48■■□□□ 1.19
SMC4-211ENST00000469858 SURF6O75683 361 aaKnown RBP22.47■■□□□ 1.19
SMC4-211ENST00000469858 BICC1Q9H694 974 aaKnown RBP22.47■■□□□ 1.19
SMC4-211ENST00000469858 BMP2KLQ5H9B9 411 aa22.47■■□□□ 1.19
SMC4-211ENST00000469858 PALLDQ8WX93 1383 aa22.46■■□□□ 1.19
SMC4-211ENST00000469858 JARID2Q92833 1246 aaPredicted RBP22.46■■□□□ 1.19
SMC4-211ENST00000469858 ZBTB1Q9Y2K1 713 aa22.46■■□□□ 1.19
SMC4-211ENST00000469858 A0A087WZG4 1122 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 SEC24BO95487 1268 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 KIF6Q6ZMV9 814 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 UBE3BQ7Z3V4 1068 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 ARXQ96QS3 562 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 ATRNO75882 1429 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 LOC102724428A0A0B4J2F2 783 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 ATP6V1AP38606 617 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 SIK1P57059 783 aa22.45■■□□□ 1.18
SMC4-211ENST00000469858 TRPC5Q9UL62 973 aaPredicted RBP22.45■■□□□ 1.18
SMC4-211ENST00000469858 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
SMC4-211ENST00000469858 CICQ96RK0 1608 aaPredicted RBP22.43■■□□□ 1.18
SMC4-211ENST00000469858 RAB11FIP3O75154 756 aa22.43■■□□□ 1.18
SMC4-211ENST00000469858 SMARCC1Q92922 1105 aaPredicted RBP22.43■■□□□ 1.18
SMC4-211ENST00000469858 EPHA10Q5JZY3 1008 aa22.41■■□□□ 1.18
SMC4-211ENST00000469858 GSPT1P15170 499 aaKnown RBP22.41■■□□□ 1.18
SMC4-211ENST00000469858 FAM182BQ5T319 152 aa22.41■■□□□ 1.18
SMC4-211ENST00000469858 TTC22Q5TAA0 569 aa22.41■■□□□ 1.18
SMC4-211ENST00000469858 CCDC191Q8NCU4 936 aa22.41■■□□□ 1.18
SMC4-211ENST00000469858 IL1RAPL2Q9NP60 686 aa22.41■■□□□ 1.18
SMC4-211ENST00000469858 MAP3K15Q6ZN16 1313 aa22.41■■□□□ 1.18
SMC4-211ENST00000469858 BTAF1O14981 1849 aa22.4■■□□□ 1.18
SMC4-211ENST00000469858 OS9Q13438 667 aaPredicted RBP22.4■■□□□ 1.18
SMC4-211ENST00000469858 ITPK1Q13572 414 aa22.4■■□□□ 1.18
SMC4-211ENST00000469858 HSP90AB4PQ58FF6 505 aa22.4■■□□□ 1.18
SMC4-211ENST00000469858 PA2G4Q9UQ80 394 aaKnown RBP22.4■■□□□ 1.18
SMC4-211ENST00000469858 NHSQ6T4R5 1651 aa22.4■■□□□ 1.18
SMC4-211ENST00000469858 IL6STP40189 918 aaPredicted RBP22.39■■□□□ 1.18
SMC4-211ENST00000469858 CASP7P55210 303 aa22.39■■□□□ 1.18
SMC4-211ENST00000469858 TCIRG1Q13488 830 aa22.39■■□□□ 1.18
SMC4-211ENST00000469858 RHPN1Q8TCX5 695 aa22.39■■□□□ 1.18
SMC4-211ENST00000469858 KIF1BPQ96EK5 621 aa22.39■■□□□ 1.18
SMC4-211ENST00000469858 NOP58Q9Y2X3 529 aaKnown RBP22.39■■□□□ 1.18
SMC4-211ENST00000469858 COL15A1P39059 1388 aa22.39■■□□□ 1.17
SMC4-211ENST00000469858 CRKLP46109 303 aaKnown RBP22.39■■□□□ 1.17
SMC4-211ENST00000469858 RTL5Q5HYW3 569 aaPredicted RBP22.39■■□□□ 1.17
SMC4-211ENST00000469858 ANKRD36CQ5JPF3 1778 aa22.39■■□□□ 1.17
SMC4-211ENST00000469858 MYH14Q7Z406 1995 aaKnown RBP22.39■■□□□ 1.17
SMC4-211ENST00000469858 ISCA1Q9BUE6 129 aa22.39■■□□□ 1.17
SMC4-211ENST00000469858 CCDC87Q9NVE4 849 aa22.39■■□□□ 1.17
SMC4-211ENST00000469858 COL5A3P25940 1745 aaPredicted RBP22.38■■□□□ 1.17
SMC4-211ENST00000469858 RREB1Q92766 1687 aa22.38■■□□□ 1.17
SMC4-211ENST00000469858 H7C1W4 665 aa22.38■■□□□ 1.17
SMC4-211ENST00000469858 PTF1AQ7RTS3 328 aa22.38■■□□□ 1.17
SMC4-211ENST00000469858 NUP98P52948 1817 aa22.38■■□□□ 1.17
SMC4-211ENST00000469858 PDE1AP54750 535 aa22.38■■□□□ 1.17
SMC4-211ENST00000469858 INTS5Q6P9B9 1019 aaKnown RBP22.38■■□□□ 1.17
SMC4-211ENST00000469858 QTRT2Q9H974 415 aaKnown RBP22.38■■□□□ 1.17
SMC4-211ENST00000469858 SALL3Q9BXA9 1300 aa22.37■■□□□ 1.17
SMC4-211ENST00000469858 GIGYF2Q6Y7W6 1299 aaKnown RBP22.37■■□□□ 1.17
SMC4-211ENST00000469858 ZNF831Q5JPB2 1677 aa22.37■■□□□ 1.17
SMC4-211ENST00000469858 MX1P20591 662 aa22.36■■□□□ 1.17
SMC4-211ENST00000469858 HLFQ16534 295 aa22.36■■□□□ 1.17
SMC4-211ENST00000469858 DZIP3Q86Y13 1208 aaKnown RBP22.36■■□□□ 1.17
SMC4-211ENST00000469858 SEPT12Q8IYM1 358 aa22.36■■□□□ 1.17
SMC4-211ENST00000469858 OSBPL3Q9H4L5 887 aa22.36■■□□□ 1.17
SMC4-211ENST00000469858 UPF2Q9HAU5 1272 aaKnown RBP22.36■■□□□ 1.17
SMC4-211ENST00000469858 SBF2Q86WG5 1849 aa22.36■■□□□ 1.17
SMC4-211ENST00000469858 ONECUT3O60422 494 aaPredicted RBP22.36■■□□□ 1.17
SMC4-211ENST00000469858 RABL6Q3YEC7 729 aaPredicted RBP22.36■■□□□ 1.17
SMC4-211ENST00000469858 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
SMC4-211ENST00000469858 TSHZ3Q63HK5 1081 aa22.35■■□□□ 1.17
SMC4-211ENST00000469858 TUBGCP6Q96RT7 1819 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms