RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 TSC1Q92574 1164 aa17.92■□□□□ 0.46
RRP1-201ENST00000467112 CHPF2Q9P2E5 772 aa17.92■□□□□ 0.46
RRP1-201ENST00000467112 LETM1O95202 739 aaPredicted RBP17.91■□□□□ 0.46
RRP1-201ENST00000467112 DIAPH3Q9NSV4 1193 aa17.91■□□□□ 0.46
RRP1-201ENST00000467112 UBR1Q8IWV7 1749 aa17.91■□□□□ 0.46
RRP1-201ENST00000467112 BEND3Q5T5X7 828 aa17.91■□□□□ 0.46
RRP1-201ENST00000467112 JAKMIP1Q96N16 626 aaKnown RBP17.91■□□□□ 0.46
RRP1-201ENST00000467112 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
RRP1-201ENST00000467112 KDM4AO75164 1064 aa17.9■□□□□ 0.46
RRP1-201ENST00000467112 PRPF40BQ6NWY9 871 aaKnown RBP17.9■□□□□ 0.46
RRP1-201ENST00000467112 ATP6V1DQ9Y5K8 247 aa17.9■□□□□ 0.46
RRP1-201ENST00000467112 MYRIPQ8NFW9 859 aa17.9■□□□□ 0.46
RRP1-201ENST00000467112 DNAAF4Q8WXU2 420 aa17.9■□□□□ 0.46
RRP1-201ENST00000467112 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
RRP1-201ENST00000467112 MTMR6Q9Y217 621 aa17.9■□□□□ 0.46
RRP1-201ENST00000467112 FUCA2Q9BTY2 467 aa17.9■□□□□ 0.46
RRP1-201ENST00000467112 NWD1Q149M9 1564 aa17.89■□□□□ 0.45
RRP1-201ENST00000467112 GLRX3O76003 335 aaKnown RBP17.89■□□□□ 0.45
RRP1-201ENST00000467112 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
RRP1-201ENST00000467112 PIK3C2AO00443 1686 aa17.89■□□□□ 0.45
RRP1-201ENST00000467112 AP5Z1O43299 807 aa17.89■□□□□ 0.45
RRP1-201ENST00000467112 KCNQ3O43525 872 aa17.89■□□□□ 0.45
RRP1-201ENST00000467112 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
RRP1-201ENST00000467112 RGPD8O14715 1765 aaPredicted RBP17.88■□□□□ 0.45
RRP1-201ENST00000467112 VPS37CA5D8V6 355 aaPredicted RBP17.88■□□□□ 0.45
RRP1-201ENST00000467112 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
RRP1-201ENST00000467112 EIF4A1P60842 406 aaKnown RBP17.88■□□□□ 0.45
RRP1-201ENST00000467112 ST3GAL1Q11201 340 aa17.88■□□□□ 0.45
RRP1-201ENST00000467112 MTERF4Q7Z6M4 381 aaKnown RBP17.88■□□□□ 0.45
RRP1-201ENST00000467112 NECAB1Q8N987 351 aa17.88■□□□□ 0.45
RRP1-201ENST00000467112 ADAMTSL3P82987 1691 aa17.88■□□□□ 0.45
RRP1-201ENST00000467112 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
RRP1-201ENST00000467112 VPS53Q5VIR6 699 aa17.87■□□□□ 0.45
RRP1-201ENST00000467112 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
RRP1-201ENST00000467112 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
RRP1-201ENST00000467112 PA2G4Q9UQ80 394 aaKnown RBP17.87■□□□□ 0.45
RRP1-201ENST00000467112 TTC41PQ6P2S7 1318 aa17.87■□□□□ 0.45
RRP1-201ENST00000467112 ME3Q16798 604 aa17.86■□□□□ 0.45
RRP1-201ENST00000467112 RUFY2Q8WXA3 655 aa17.86■□□□□ 0.45
RRP1-201ENST00000467112 CYP46A1Q9Y6A2 500 aa17.86■□□□□ 0.45
RRP1-201ENST00000467112 USP42Q9H9J4 1324 aaKnown RBP17.86■□□□□ 0.45
RRP1-201ENST00000467112 COL9A3Q14050 684 aaPredicted RBP17.86■□□□□ 0.45
RRP1-201ENST00000467112 ZSWIM6Q9HCJ5 1215 aa17.86■□□□□ 0.45
RRP1-201ENST00000467112 FAM177BA6PVY3 158 aa17.85■□□□□ 0.45
RRP1-201ENST00000467112 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
RRP1-201ENST00000467112 PRIMPOLQ96LW4 560 aa17.85■□□□□ 0.45
RRP1-201ENST00000467112 CHMP3Q9Y3E7 222 aa17.85■□□□□ 0.45
RRP1-201ENST00000467112 CEBPAP49715 358 aaPredicted RBP17.85■□□□□ 0.45
RRP1-201ENST00000467112 ECHDC1Q9NTX5 307 aa17.85■□□□□ 0.45
RRP1-201ENST00000467112 SPC24Q8NBT2 197 aa17.85■□□□□ 0.45
RRP1-201ENST00000467112 ADCY9O60503 1353 aa17.84■□□□□ 0.45
RRP1-201ENST00000467112 FAM173BQ6P4H8 233 aa17.84■□□□□ 0.45
RRP1-201ENST00000467112 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
RRP1-201ENST00000467112 SH2B1Q9NRF2 756 aaPredicted RBP17.84■□□□□ 0.45
RRP1-201ENST00000467112 SPTLC3Q9NUV7 552 aa17.84■□□□□ 0.45
RRP1-201ENST00000467112 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
RRP1-201ENST00000467112 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
RRP1-201ENST00000467112 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
RRP1-201ENST00000467112 IFIT2P09913 472 aaKnown RBP17.83■□□□□ 0.45
RRP1-201ENST00000467112 NECTIN1Q15223 517 aa17.83■□□□□ 0.45
RRP1-201ENST00000467112 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.45
RRP1-201ENST00000467112 ZNF710Q8N1W2 664 aa17.83■□□□□ 0.45
RRP1-201ENST00000467112 KCNF1Q9H3M0 494 aa17.83■□□□□ 0.45
RRP1-201ENST00000467112 TPCN1Q9ULQ1 816 aa17.83■□□□□ 0.45
RRP1-201ENST00000467112 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
RRP1-201ENST00000467112 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.44
RRP1-201ENST00000467112 TM6SF1Q9BZW5 370 aa17.83■□□□□ 0.44
RRP1-201ENST00000467112 PYCARDQ9ULZ3 195 aa17.83■□□□□ 0.44
RRP1-201ENST00000467112 TTC6Q86TZ1 520 aa17.82■□□□□ 0.44
RRP1-201ENST00000467112 FAM227BQ96M60 508 aa17.82■□□□□ 0.44
RRP1-201ENST00000467112 RBM8AQ9Y5S9 174 aaKnown RBP17.82■□□□□ 0.44
RRP1-201ENST00000467112 CCDC171Q6TFL3 1326 aa17.82■□□□□ 0.44
RRP1-201ENST00000467112 KCNJ4P48050 445 aa17.82■□□□□ 0.44
RRP1-201ENST00000467112 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
RRP1-201ENST00000467112 C9orf78Q9NZ63 289 aaPredicted RBP17.82■□□□□ 0.44
RRP1-201ENST00000467112 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
RRP1-201ENST00000467112 LARP1BQ659C4 914 aaKnown RBP17.82■□□□□ 0.44
RRP1-201ENST00000467112 AACSQ86V21 672 aa17.82■□□□□ 0.44
RRP1-201ENST00000467112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.82■□□□□ 0.44
RRP1-201ENST00000467112 CAMK4Q16566 473 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 CREB3L3Q68CJ9 461 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 CDC37L1Q7L3B6 337 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 KCNB2Q92953 911 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 CRYBG1Q9Y4K1 1723 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 CCDC192P0DO97 292 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 MTX1Q13505 466 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 KIAA1524Q8TCG1 905 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 MAP3K2Q9Y2U5 619 aa17.81■□□□□ 0.44
RRP1-201ENST00000467112 CWF19L2Q2TBE0 894 aaKnown RBP17.8■□□□□ 0.44
RRP1-201ENST00000467112 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
RRP1-201ENST00000467112 GPATCH3Q96I76 525 aa17.8■□□□□ 0.44
RRP1-201ENST00000467112 BTBD11A6QL63 1104 aa17.8■□□□□ 0.44
RRP1-201ENST00000467112 HOXB7P09629 217 aa17.8■□□□□ 0.44
RRP1-201ENST00000467112 LIG1P18858 919 aa17.8■□□□□ 0.44
RRP1-201ENST00000467112 GTF2F1P35269 517 aaKnown RBP eCLIP17.8■□□□□ 0.444e-10■□□□□ 8.8
RRP1-201ENST00000467112 TEFQ10587 303 aa17.8■□□□□ 0.44
RRP1-201ENST00000467112 NMIQ13287 307 aaPredicted RBP17.8■□□□□ 0.44
RRP1-201ENST00000467112 PROSER3Q2NL68 480 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms